RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 PTPRKQ15262 1439 aa9.9□□□□□ -0.83
SH3RF1-204ENST00000510806 NCOA1Q15788 1441 aa9.9□□□□□ -0.83
SH3RF1-204ENST00000510806 ADGBQ8N7X0 1667 aa9.9□□□□□ -0.83
SH3RF1-204ENST00000510806 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
SH3RF1-204ENST00000510806 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
SH3RF1-204ENST00000510806 GGT6Q6P531 493 aa9.88□□□□□ -0.83
SH3RF1-204ENST00000510806 LTBP4Q8N2S1 1624 aa9.87□□□□□ -0.83
SH3RF1-204ENST00000510806 LOC105371045A0A1W2PR82 267 aa9.87□□□□□ -0.83
SH3RF1-204ENST00000510806 MAP3K1Q13233 1512 aa9.87□□□□□ -0.83
SH3RF1-204ENST00000510806 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
SH3RF1-204ENST00000510806 VPS8Q8N3P4 1428 aa9.86□□□□□ -0.83
SH3RF1-204ENST00000510806 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 ARHGAP33O14559 1287 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 CAMSAP1Q5T5Y3 1602 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 CAMSAP2Q08AD1 1489 aa9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
SH3RF1-204ENST00000510806 ZNF142P52746 1687 aaPredicted RBP9.84□□□□□ -0.83
SH3RF1-204ENST00000510806 FAM135AQ9P2D6 1515 aa9.84□□□□□ -0.83
SH3RF1-204ENST00000510806 PSEN2P49810 448 aa9.84□□□□□ -0.83
SH3RF1-204ENST00000510806 ADGRD1Q6QNK2 874 aa9.84□□□□□ -0.83
SH3RF1-204ENST00000510806 IQSEC2Q5JU85 1478 aa9.84□□□□□ -0.83
SH3RF1-204ENST00000510806 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-204ENST00000510806 KIF3BO15066 747 aa9.83□□□□□ -0.84
SH3RF1-204ENST00000510806 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-204ENST00000510806 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 MYO3AQ8NEV4 1616 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 MIA2Q96PC5 1412 aa9.82□□□□□ -0.84
SH3RF1-204ENST00000510806 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
SH3RF1-204ENST00000510806 PZPP20742 1482 aa9.81□□□□□ -0.84
SH3RF1-204ENST00000510806 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
SH3RF1-204ENST00000510806 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
SH3RF1-204ENST00000510806 HRO43593 1189 aa9.8□□□□□ -0.84
SH3RF1-204ENST00000510806 DNMT1P26358 1616 aaKnown RBP9.8□□□□□ -0.84
SH3RF1-204ENST00000510806 WASHC2CQ9Y4E1 1318 aa9.8□□□□□ -0.84
SH3RF1-204ENST00000510806 KDM5DQ9BY66 1539 aa9.79□□□□□ -0.84
SH3RF1-204ENST00000510806 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
SH3RF1-204ENST00000510806 TNRQ92752 1358 aa9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 TK2O00142 265 aa9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 GTPBP6O43824 516 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-204ENST00000510806 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
SH3RF1-204ENST00000510806 RNF17Q9BXT8 1623 aaKnown RBP9.77□□□□□ -0.85
SH3RF1-204ENST00000510806 NLRP1Q9C000 1473 aa9.77□□□□□ -0.85
SH3RF1-204ENST00000510806 TBC1D12O60347 775 aa9.76□□□□□ -0.85
SH3RF1-204ENST00000510806 THEMISQ8N1K5 641 aaPredicted RBP9.76□□□□□ -0.85
SH3RF1-204ENST00000510806 EIF2AK4Q9P2K8 1649 aaKnown RBP9.75□□□□□ -0.85
SH3RF1-204ENST00000510806 RYDENQ9NUL5 291 aaKnown RBP9.75□□□□□ -0.85
SH3RF1-204ENST00000510806 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
SH3RF1-204ENST00000510806 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
SH3RF1-204ENST00000510806 MED14O60244 1454 aa9.74□□□□□ -0.85
SH3RF1-204ENST00000510806 ABCC3O15438 1527 aa9.74□□□□□ -0.85
SH3RF1-204ENST00000510806 ANKLE2Q86XL3 938 aa9.74□□□□□ -0.85
SH3RF1-204ENST00000510806 KCNK17Q96T54 332 aa9.74□□□□□ -0.85
SH3RF1-204ENST00000510806 ABCC5O15440 1437 aa9.73□□□□□ -0.85
SH3RF1-204ENST00000510806 SPATA31D1Q6ZQQ2 1576 aa9.73□□□□□ -0.85
SH3RF1-204ENST00000510806 ZC3H13Q5T200 1668 aaKnown RBP9.73□□□□□ -0.85
SH3RF1-204ENST00000510806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.73□□□□□ -0.85
SH3RF1-204ENST00000510806 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
SH3RF1-204ENST00000510806 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
SH3RF1-204ENST00000510806 DUOX2Q9NRD8 1548 aa9.72□□□□□ -0.85
SH3RF1-204ENST00000510806 DEPDC5O75140 1603 aa9.72□□□□□ -0.85
SH3RF1-204ENST00000510806 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.85
SH3RF1-204ENST00000510806 POLR1AO95602 1720 aaPredicted RBP9.71□□□□□ -0.85
SH3RF1-204ENST00000510806 ZNF454Q8N9F8 522 aa9.71□□□□□ -0.86
SH3RF1-204ENST00000510806 ERVK-7P63135 1459 aa9.71□□□□□ -0.86
SH3RF1-204ENST00000510806 CPS1P31327 1500 aa9.71□□□□□ -0.86
SH3RF1-204ENST00000510806 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 KIF15Q9NS87 1388 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 ERBINQ96RT1 1412 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 PTPN23Q9H3S7 1636 aa9.7□□□□□ -0.86
SH3RF1-204ENST00000510806 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 PDE4AP27815 886 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 DAPK1P53355 1430 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 FOSBP53539 338 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 FGD6Q6ZV73 1430 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 RRP7BPQ9NSQ0 103 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
SH3RF1-204ENST00000510806 CROCC2H7BZ55 1655 aa9.68□□□□□ -0.86
SH3RF1-204ENST00000510806 PRDM15P57071 1507 aaPredicted RBP9.68□□□□□ -0.86
SH3RF1-204ENST00000510806 MFSD10Q14728 455 aa9.68□□□□□ -0.86
SH3RF1-204ENST00000510806 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
SH3RF1-204ENST00000510806 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
SH3RF1-204ENST00000510806 ARHGAP23Q9P227 1491 aa9.67□□□□□ -0.86
SH3RF1-204ENST00000510806 DISP3Q9P2K9 1392 aa9.67□□□□□ -0.86
SH3RF1-204ENST00000510806 SLIT1O75093 1534 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms