RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 PTPRGP23470 1445 aa15.34■□□□□ 0.05
SH3TC2-208ENST00000510779 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
SH3TC2-208ENST00000510779 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
SH3TC2-208ENST00000510779 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
SH3TC2-208ENST00000510779 TPM2P07951 284 aa15.32■□□□□ 0.04
SH3TC2-208ENST00000510779 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
SH3TC2-208ENST00000510779 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
SH3TC2-208ENST00000510779 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
SH3TC2-208ENST00000510779 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
SH3TC2-208ENST00000510779 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
SH3TC2-208ENST00000510779 MTHFSP49914 203 aa15.31■□□□□ 0.04
SH3TC2-208ENST00000510779 CFAP53Q96M91 514 aa15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 AAMPQ13685 434 aa15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 PDCL3Q9H2J4 239 aa15.3■□□□□ 0.04
SH3TC2-208ENST00000510779 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
SH3TC2-208ENST00000510779 SSFA2P28290 1259 aa15.29■□□□□ 0.04
SH3TC2-208ENST00000510779 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
SH3TC2-208ENST00000510779 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
SH3TC2-208ENST00000510779 CCDC141Q6ZP82 1450 aa15.29■□□□□ 0.04
SH3TC2-208ENST00000510779 SLC12A5Q9H2X9 1139 aa15.28■□□□□ 0.04
SH3TC2-208ENST00000510779 TRIM27P14373 513 aa15.28■□□□□ 0.04
SH3TC2-208ENST00000510779 CCDC173Q0VFZ6 552 aa15.28■□□□□ 0.04
SH3TC2-208ENST00000510779 ANKRD45Q5TZF3 282 aa15.28■□□□□ 0.04
SH3TC2-208ENST00000510779 ZSCAN30Q86W11 494 aa15.28■□□□□ 0.04
SH3TC2-208ENST00000510779 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
SH3TC2-208ENST00000510779 DDX19BQ9UMR2 479 aa15.27■□□□□ 0.03
SH3TC2-208ENST00000510779 ATP10BO94823 1461 aa15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 CAVIN1Q6NZI2 390 aaKnown RBP15.26■□□□□ 0.03
SH3TC2-208ENST00000510779 CD2BP2O95400 341 aaKnown RBP15.25■□□□□ 0.03
SH3TC2-208ENST00000510779 TMEM57Q8N5G2 664 aa15.25■□□□□ 0.03
SH3TC2-208ENST00000510779 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
SH3TC2-208ENST00000510779 XPCQ01831 940 aaPredicted RBP15.25■□□□□ 0.03
SH3TC2-208ENST00000510779 RAB3GAP1Q15042 981 aa15.25■□□□□ 0.03
SH3TC2-208ENST00000510779 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 SCAF11Q99590 1463 aaKnown RBP15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 ADCY10Q96PN6 1610 aa15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
SH3TC2-208ENST00000510779 CDC42BPAQ5VT25 1732 aa15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 ABCC10Q5T3U5 1492 aa15.23■□□□□ 0.03
SH3TC2-208ENST00000510779 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
SH3TC2-208ENST00000510779 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
SH3TC2-208ENST00000510779 CIZ1Q9ULV3 898 aaPredicted RBP15.22■□□□□ 0.03
SH3TC2-208ENST00000510779 EIF2AK4Q9P2K8 1649 aaKnown RBP15.22■□□□□ 0.03
SH3TC2-208ENST00000510779 PTMSP20962 102 aa15.21■□□□□ 0.03
SH3TC2-208ENST00000510779 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
SH3TC2-208ENST00000510779 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.02
SH3TC2-208ENST00000510779 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 OFD1O75665 1012 aa15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 SNX21Q969T3 373 aa15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 RBM25P49756 843 aaKnown RBP15.2■□□□□ 0.02
SH3TC2-208ENST00000510779 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 UQCRHP07919 91 aa15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 PTMAP06454 111 aaKnown RBP15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 DNTTIP2Q5QJE6 756 aaKnown RBP15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
SH3TC2-208ENST00000510779 PRDM10Q9NQV6 1147 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 PODXL2Q9NZ53 605 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 MPNDQ8N594 471 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
SH3TC2-208ENST00000510779 APBB1O00213 710 aa15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 RIPK4P57078 832 aa15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 NUCB1Q02818 461 aa15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 RBM27Q9P2N5 1060 aaKnown RBP15.17■□□□□ 0.02
SH3TC2-208ENST00000510779 ZMYM3Q14202 1370 aa15.16■□□□□ 0.02
SH3TC2-208ENST00000510779 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
SH3TC2-208ENST00000510779 DDIT3P35638 169 aa15.16■□□□□ 0.02
SH3TC2-208ENST00000510779 SYNMO15061 1565 aa15.16■□□□□ 0.02
SH3TC2-208ENST00000510779 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
SH3TC2-208ENST00000510779 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
SH3TC2-208ENST00000510779 ZCCHC11Q5TAX3 1644 aaKnown RBP15.15■□□□□ 0.02
SH3TC2-208ENST00000510779 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
SH3TC2-208ENST00000510779 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms