RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 C14orf93Q9H972 538 aaKnown RBP39.3■■■■□ 3.88
SNF8-208ENST00000510195 MYOM2P54296 1465 aa39.3■■■■□ 3.88
SNF8-208ENST00000510195 KNDC1Q76NI1 1749 aa39.29■■■■□ 3.88
SNF8-208ENST00000510195 TMEM132EQ6IEE7 984 aa39.29■■■■□ 3.88
SNF8-208ENST00000510195 SIRT1Q96EB6 747 aa39.28■■■■□ 3.88
SNF8-208ENST00000510195 SOS2Q07890 1332 aaPredicted RBP39.28■■■■□ 3.88
SNF8-208ENST00000510195 NUTM2BA6NNL0 878 aaPredicted RBP39.27■■■■□ 3.88
SNF8-208ENST00000510195 NUTM2EB1AL46 878 aaPredicted RBP39.27■■■■□ 3.88
SNF8-208ENST00000510195 NUTM2AQ8IVF1 878 aaPredicted RBP39.27■■■■□ 3.88
SNF8-208ENST00000510195 PNPLA6Q8IY17 1366 aa39.27■■■■□ 3.88
SNF8-208ENST00000510195 YTHDC2Q9H6S0 1430 aaKnown RBP39.26■■■■□ 3.88
SNF8-208ENST00000510195 WAPLQ7Z5K2 1190 aa39.25■■■■□ 3.87
SNF8-208ENST00000510195 DHX57Q6P158 1386 aaKnown RBP39.2■■■■□ 3.87
SNF8-208ENST00000510195 ESCO1Q5FWF5 840 aa39.19■■■■□ 3.86
SNF8-208ENST00000510195 NPHP3Q7Z494 1330 aa39.17■■■■□ 3.86
SNF8-208ENST00000510195 CFAP70Q5T0N1 1121 aa39.17■■■■□ 3.86
SNF8-208ENST00000510195 STAC3Q96MF2 364 aa39.16■■■■□ 3.86
SNF8-208ENST00000510195 PLEKHH1Q9ULM0 1364 aa39.16■■■■□ 3.86
SNF8-208ENST00000510195 AFF2P51816 1311 aa39.12■■■■□ 3.85
SNF8-208ENST00000510195 RXRBP28702 533 aa39.08■■■■□ 3.85
SNF8-208ENST00000510195 C8orf37Q96NL8 207 aa39.07■■■■□ 3.85
SNF8-208ENST00000510195 FMN2Q9NZ56 1722 aa39.06■■■■□ 3.84
SNF8-208ENST00000510195 FOXO3O43524 673 aa39.05■■■■□ 3.84
SNF8-208ENST00000510195 PXDNQ92626 1479 aa39.05■■■■□ 3.84
SNF8-208ENST00000510195 DLC1Q96QB1 1528 aa39.04■■■■□ 3.84
SNF8-208ENST00000510195 COL22A1Q8NFW1 1626 aaPredicted RBP39.03■■■■□ 3.84
SNF8-208ENST00000510195 NUTM2FA1L443 756 aa39.03■■■■□ 3.84
SNF8-208ENST00000510195 DCAF11Q8TEB1 546 aa39.02■■■■□ 3.84
SNF8-208ENST00000510195 CDK12Q9NYV4 1490 aaPredicted RBP39.02■■■■□ 3.84
SNF8-208ENST00000510195 NGLY1Q96IV0 654 aa39■■■■□ 3.83
SNF8-208ENST00000510195 PRAM1Q96QH2 718 aa39■■■■□ 3.83
SNF8-208ENST00000510195 ADAMTS2O95450 1211 aa38.99■■■■□ 3.83
SNF8-208ENST00000510195 ADGRB1O14514 1584 aa38.99■■■■□ 3.83
SNF8-208ENST00000510195 KIF1AQ12756 1690 aa38.97■■■■□ 3.83
SNF8-208ENST00000510195 KDM2AQ9Y2K7 1162 aa38.97■■■■□ 3.83
SNF8-208ENST00000510195 QTRT2Q9H974 415 aaKnown RBP38.96■■■■□ 3.83
SNF8-208ENST00000510195 POGKQ9P215 609 aa38.96■■■■□ 3.83
SNF8-208ENST00000510195 RBM6P78332 1123 aaKnown RBP38.93■■■■□ 3.82
SNF8-208ENST00000510195 XPCQ01831 940 aaPredicted RBP38.92■■■■□ 3.82
SNF8-208ENST00000510195 FNBP4Q8N3X1 1017 aaPredicted RBP38.91■■■■□ 3.82
SNF8-208ENST00000510195 SAFB2Q14151 953 aaKnown RBP eCLIP38.9■■■■□ 3.82
SNF8-208ENST00000510195 PHF8Q9UPP1 1060 aa38.89■■■■□ 3.82
SNF8-208ENST00000510195 TRAK1Q9UPV9 953 aa38.88■■■■□ 3.81
SNF8-208ENST00000510195 SPATA31A3Q5VYP0 1347 aa38.88■■■■□ 3.81
SNF8-208ENST00000510195 KRT28Q7Z3Y7 464 aa38.87■■■■□ 3.81
SNF8-208ENST00000510195 ADGRB2O60241 1585 aa38.87■■■■□ 3.81
SNF8-208ENST00000510195 USP21Q9UK80 565 aa38.86■■■■□ 3.81
SNF8-208ENST00000510195 ANKARQ7Z5J8 1434 aa38.86■■■■□ 3.81
SNF8-208ENST00000510195 PSME1Q06323 249 aa38.85■■■■□ 3.81
SNF8-208ENST00000510195 RGPD8O14715 1765 aaPredicted RBP38.84■■■■□ 3.81
SNF8-208ENST00000510195 TRPC5Q9UL62 973 aaPredicted RBP38.82■■■■□ 3.8
SNF8-208ENST00000510195 EIF3AQ14152 1382 aaKnown RBP38.81■■■■□ 3.8
SNF8-208ENST00000510195 UPF1Q92900 1129 aaKnown RBP eCLIP38.79■■■■□ 3.8
SNF8-208ENST00000510195 MARF1Q9Y4F3 1742 aaKnown RBP38.77■■■■□ 3.8
SNF8-208ENST00000510195 SBNO1A3KN83 1393 aa38.76■■■■□ 3.8
SNF8-208ENST00000510195 RGS12O14924 1447 aa38.76■■■■□ 3.8
SNF8-208ENST00000510195 TNS3Q68CZ2 1445 aa38.75■■■■□ 3.79
SNF8-208ENST00000510195 ATRNO75882 1429 aa38.73■■■■□ 3.79
SNF8-208ENST00000510195 MINK1Q8N4C8 1332 aaPredicted RBP38.73■■■■□ 3.79
SNF8-208ENST00000510195 USP32Q8NFA0 1604 aa38.73■■■■□ 3.79
SNF8-208ENST00000510195 WASLO00401 505 aaPredicted RBP38.72■■■■□ 3.79
SNF8-208ENST00000510195 HIRIP3Q9BW71 556 aaPredicted RBP38.72■■■■□ 3.79
SNF8-208ENST00000510195 BCL9LQ86UU0 1499 aa38.7■■■■□ 3.79
SNF8-208ENST00000510195 ARHGEF10O15013 1369 aa38.7■■■■□ 3.78
SNF8-208ENST00000510195 TULP4Q9NRJ4 1543 aa38.68■■■■□ 3.78
SNF8-208ENST00000510195 PMFBP1Q8TBY8 1022 aa38.68■■■■□ 3.78
SNF8-208ENST00000510195 KIAA1210Q9ULL0 1709 aa38.68■■■■□ 3.78
SNF8-208ENST00000510195 ARHGEF28Q8N1W1 1705 aaKnown RBP38.66■■■■□ 3.78
SNF8-208ENST00000510195 PRR36Q9H6K5 1346 aa38.63■■■■□ 3.78
SNF8-208ENST00000510195 GPRASP1Q5JY77 1395 aa38.62■■■■□ 3.77
SNF8-208ENST00000510195 HAP1P54257 671 aaPredicted RBP38.62■■■■□ 3.77
SNF8-208ENST00000510195 SLIT2O94813 1529 aa38.62■■■■□ 3.77
SNF8-208ENST00000510195 UNC5CLQ8IV45 518 aa38.61■■■■□ 3.77
SNF8-208ENST00000510195 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.6■■■■□ 3.77
SNF8-208ENST00000510195 LMOD2Q6P5Q4 547 aa38.59■■■■□ 3.77
SNF8-208ENST00000510195 GJD4Q96KN9 370 aaPredicted RBP38.59■■■■□ 3.77
SNF8-208ENST00000510195 CABLES1Q8TDN4 633 aa38.55■■■■□ 3.76
SNF8-208ENST00000510195 NGDNQ8NEJ9 315 aaKnown RBP38.54■■■■□ 3.76
SNF8-208ENST00000510195 TRPM3Q9HCF6 1732 aaPredicted RBP38.54■■■■□ 3.76
SNF8-208ENST00000510195 ATAD2Q6PL18 1390 aa38.54■■■■□ 3.76
SNF8-208ENST00000510195 NUDT16Q96DE0 195 aaKnown RBP38.52■■■■□ 3.76
SNF8-208ENST00000510195 NBPF1Q3BBV0 1214 aa38.51■■■■□ 3.76
SNF8-208ENST00000510195 ATP7BP35670 1465 aa38.51■■■■□ 3.76
SNF8-208ENST00000510195 ITSN1Q15811 1721 aa38.51■■■■□ 3.76
SNF8-208ENST00000510195 CDK19Q9BWU1 502 aa38.5■■■■□ 3.75
SNF8-208ENST00000510195 ABCA3Q99758 1704 aa38.49■■■■□ 3.75
SNF8-208ENST00000510195 ALS2Q96Q42 1657 aa38.48■■■■□ 3.75
SNF8-208ENST00000510195 NWD2Q9ULI1 1742 aa38.46■■■■□ 3.75
SNF8-208ENST00000510195 RALGAPBQ86X10 1494 aa38.45■■■■□ 3.75
SNF8-208ENST00000510195 VPS72Q15906 364 aa38.44■■■■□ 3.74
SNF8-208ENST00000510195 L3MBTL2Q969R5 705 aa38.44■■■■□ 3.74
SNF8-208ENST00000510195 CCDC61Q9Y6R9 512 aa38.43■■■■□ 3.74
SNF8-208ENST00000510195 FAM83GA6ND36 823 aa38.41■■■■□ 3.74
SNF8-208ENST00000510195 PLEKHG5O94827 1062 aa38.41■■■■□ 3.74
SNF8-208ENST00000510195 GLI3P10071 1580 aa38.4■■■■□ 3.74
SNF8-208ENST00000510195 EP400Q96L91 3159 aa38.4■■■■□ 3.74
SNF8-208ENST00000510195 PLCH1Q4KWH8 1693 aa38.4■■■■□ 3.74
SNF8-208ENST00000510195 PAK3O75914 559 aaPredicted RBP38.39■■■■□ 3.74
SNF8-208ENST00000510195 POLR3AO14802 1390 aaPredicted RBP38.39■■■■□ 3.74
SNF8-208ENST00000510195 CENPJQ9HC77 1338 aaPredicted RBP38.38■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms