RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 CRIPAKQ8N1N5 446 aa5.4□□□□□ -1.54
SMN2-209ENST00000509805 GPCPD1Q9NPB8 672 aa5.4□□□□□ -1.54
SMN2-209ENST00000509805 ATP6V1AP38606 617 aa5.39□□□□□ -1.55
SMN2-209ENST00000509805 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
SMN2-209ENST00000509805 ZNF598Q86UK7 904 aaKnown RBP5.39□□□□□ -1.55
SMN2-209ENST00000509805 ZMYND10O75800 440 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 GCGRP47871 477 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 GSK3AP49840 483 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 SPRYD7Q5W111 196 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 SCUBE3Q8IX30 993 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 TMUB1Q9BVT8 246 aa5.38□□□□□ -1.55
SMN2-209ENST00000509805 ATP1B4Q9UN42 357 aaPredicted RBP5.38□□□□□ -1.55
SMN2-209ENST00000509805 TNFRSF10AO00220 468 aa5.37□□□□□ -1.55
SMN2-209ENST00000509805 EMID1Q96A84 441 aaPredicted RBP5.37□□□□□ -1.55
SMN2-209ENST00000509805 SPSB2Q99619 263 aa5.37□□□□□ -1.55
SMN2-209ENST00000509805 GDF9O60383 454 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 KDM4AO75164 1064 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 FMNL1O95466 1100 aaPredicted RBP5.36□□□□□ -1.55
SMN2-209ENST00000509805 S1PR4O95977 384 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 ADH1BP00325 375 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 GMPRP36959 345 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 AK7Q96M32 723 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 SLC6A16Q9GZN6 736 aa5.36□□□□□ -1.55
SMN2-209ENST00000509805 PPEF1O14829 653 aaPredicted RBP5.35□□□□□ -1.55
SMN2-209ENST00000509805 SSTR3P32745 418 aaPredicted RBP5.35□□□□□ -1.55
SMN2-209ENST00000509805 TMEM151AQ8N4L1 468 aa5.35□□□□□ -1.55
SMN2-209ENST00000509805 CD46P15529 392 aa5.34□□□□□ -1.55
SMN2-209ENST00000509805 Q3C1V9 767 aa5.34□□□□□ -1.55
SMN2-209ENST00000509805 MORN1Q5T089 497 aa5.34□□□□□ -1.55
SMN2-209ENST00000509805 SLC24A3Q9HC58 644 aa5.34□□□□□ -1.55
SMN2-209ENST00000509805 FAM217BQ9NTX9 383 aaPredicted RBP5.34□□□□□ -1.55
SMN2-209ENST00000509805 SLC27A5Q9Y2P5 690 aa5.34□□□□□ -1.55
SMN2-209ENST00000509805 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 RNF223E7ERA6 249 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 AXIN1O15169 862 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 USP46P62068 366 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 GIGYF2Q6Y7W6 1299 aaKnown RBP5.33□□□□□ -1.56
SMN2-209ENST00000509805 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
SMN2-209ENST00000509805 C6orf229H3BNL8 230 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 TRIM66O15016 1216 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
SMN2-209ENST00000509805 ZNF697Q5TEC3 545 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 CCDC24Q8N4L8 307 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 SLC16A10Q8TF71 515 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 BEGAINQ9BUH8 593 aa5.32□□□□□ -1.56
SMN2-209ENST00000509805 ZBTB24O43167 697 aaPredicted RBP5.31□□□□□ -1.56
SMN2-209ENST00000509805 GDF11O95390 407 aa5.31□□□□□ -1.56
SMN2-209ENST00000509805 AVPP01185 164 aa5.31□□□□□ -1.56
SMN2-209ENST00000509805 GUCA2AQ02747 115 aa5.31□□□□□ -1.56
SMN2-209ENST00000509805 HLA-CQ95604 372 aa5.31□□□□□ -1.56
SMN2-209ENST00000509805 BTBD11A6QL63 1104 aa5.3□□□□□ -1.56
SMN2-209ENST00000509805 AMHR2Q16671 573 aa5.3□□□□□ -1.56
SMN2-209ENST00000509805 RNF19BQ6ZMZ0 732 aa5.3□□□□□ -1.56
SMN2-209ENST00000509805 ANKLE1Q8NAG6 615 aa5.3□□□□□ -1.56
SMN2-209ENST00000509805 REPIN1Q9BWE0 567 aaKnown RBP5.3□□□□□ -1.56
SMN2-209ENST00000509805 HOXA2O43364 376 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 FDX1P10109 184 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 PDE4DQ08499 809 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 CSPP1Q1MSJ5 1256 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 PARP9Q8IXQ6 854 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 TSC1Q92574 1164 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 SYMPKQ92797 1274 aaKnown RBP5.29□□□□□ -1.56
SMN2-209ENST00000509805 USB1Q9BQ65 265 aaKnown RBP5.29□□□□□ -1.56
SMN2-209ENST00000509805 PRDM9Q9NQV7 894 aa5.29□□□□□ -1.56
SMN2-209ENST00000509805 FCF1Q9Y324 198 aaKnown RBP5.29□□□□□ -1.56
SMN2-209ENST00000509805 NDUFV2P19404 249 aa5.28□□□□□ -1.56
SMN2-209ENST00000509805 RASSF7Q02833 373 aa5.28□□□□□ -1.56
SMN2-209ENST00000509805 CTC1Q2NKJ3 1217 aa5.28□□□□□ -1.56
SMN2-209ENST00000509805 BRICD5Q6PL45 260 aa5.28□□□□□ -1.56
SMN2-209ENST00000509805 CD2BP2O95400 341 aaKnown RBP5.27□□□□□ -1.57
SMN2-209ENST00000509805 FOXC1Q12948 553 aa5.27□□□□□ -1.57
SMN2-209ENST00000509805 DIXDC1Q155Q3 683 aa5.27□□□□□ -1.57
SMN2-209ENST00000509805 FAM160A2Q8N612 972 aaPredicted RBP5.27□□□□□ -1.57
SMN2-209ENST00000509805 SPIRE2Q8WWL2 714 aa5.27□□□□□ -1.57
SMN2-209ENST00000509805 TBC1D2Q9BYX2 928 aa5.27□□□□□ -1.57
SMN2-209ENST00000509805 MOXD2PA6NHM9 499 aa5.26□□□□□ -1.57
SMN2-209ENST00000509805 NUTM2BA6NNL0 878 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 NUTM2EB1AL46 878 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 MS4A1P11836 297 aa5.26□□□□□ -1.57
SMN2-209ENST00000509805 SMCPP49901 116 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 NUTM2DQ5VT03 806 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 LIAT1Q6ZQX7 453 aa5.26□□□□□ -1.57
SMN2-209ENST00000509805 NUTM2AQ8IVF1 878 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 THAP11Q96EK4 314 aa5.26□□□□□ -1.57
SMN2-209ENST00000509805 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
SMN2-209ENST00000509805 SALL2Q9Y467 1007 aaPredicted RBP5.26□□□□□ -1.57
SMN2-209ENST00000509805 IRF7Q92985 503 aa5.25□□□□□ -1.57
SMN2-209ENST00000509805 TRIM47Q96LD4 638 aa5.25□□□□□ -1.57
SMN2-209ENST00000509805 IGHA1P01876 353 aa5.24□□□□□ -1.57
SMN2-209ENST00000509805 MSS51Q4VC12 460 aa5.24□□□□□ -1.57
SMN2-209ENST00000509805 RETREG3Q86VR2 466 aa5.24□□□□□ -1.57
SMN2-209ENST00000509805 MTMR2Q13614 643 aa5.23□□□□□ -1.57
SMN2-209ENST00000509805 PLA2G2CQ5R387 149 aa5.23□□□□□ -1.57
SMN2-209ENST00000509805 GPAT2Q6NUI2 795 aa5.23□□□□□ -1.57
SMN2-209ENST00000509805 RIC3Q7Z5B4 369 aa5.23□□□□□ -1.57
SMN2-209ENST00000509805 GPBP1L1Q9HC44 474 aaPredicted RBP5.23□□□□□ -1.57
SMN2-209ENST00000509805 POLR3EQ9NVU0 708 aa5.23□□□□□ -1.57
SMN2-209ENST00000509805 JUNDP17535 347 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms