RNA–Protein interactions for RNA: ENST00000509541.5

GCLC-206, Transcript of glutamate-cysteine ligase catalytic subunit, human

TSL 5

Gene GCLC, Length 3,774 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCLC-206	ENST00000509541	PAK3	O75914	559 aa	Predicted RBP	11.34	□□□□□ -0.59
GCLC-206	ENST00000509541	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.34	□□□□□ -0.59
GCLC-206	ENST00000509541	ANP32A	P39687	249 aa	Known RBP	11.33	□□□□□ -0.59
GCLC-206	ENST00000509541	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.33	□□□□□ -0.6
GCLC-206	ENST00000509541	MED1	Q15648	1581 aa	Predicted RBP	11.32	□□□□□ -0.6
GCLC-206	ENST00000509541	ZFP91	Q96JP5	570 aa	Predicted RBP	11.31	□□□□□ -0.6
GCLC-206	ENST00000509541	PLCH1	Q4KWH8	1693 aa		11.31	□□□□□ -0.6
GCLC-206	ENST00000509541	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.3	□□□□□ -0.6
GCLC-206	ENST00000509541	CIC	Q96RK0	1608 aa	Predicted RBP	11.3	□□□□□ -0.6
GCLC-206	ENST00000509541	QRICH2	Q9H0J4	1663 aa		11.3	□□□□□ -0.6
GCLC-206	ENST00000509541	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.3	□□□□□ -0.6
GCLC-206	ENST00000509541	CDC42BPG	Q6DT37	1551 aa		11.29	□□□□□ -0.6
GCLC-206	ENST00000509541	CDK11B	P21127	795 aa	Known RBP	11.29	□□□□□ -0.6
GCLC-206	ENST00000509541	FBXO3	Q9UK99	471 aa		11.29	□□□□□ -0.6
GCLC-206	ENST00000509541	COL24A1	Q17RW2	1714 aa		11.29	□□□□□ -0.6
GCLC-206	ENST00000509541	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.29	□□□□□ -0.6
GCLC-206	ENST00000509541	C11orf95	C9JLR9	678 aa	Predicted RBP	11.28	□□□□□ -0.6
GCLC-206	ENST00000509541	PIK3C2G	O75747	1445 aa		11.27	□□□□□ -0.6
GCLC-206	ENST00000509541	SPRYD3	Q8NCJ5	442 aa		11.26	□□□□□ -0.61
GCLC-206	ENST00000509541	KIF1A	Q12756	1690 aa		11.26	□□□□□ -0.61
GCLC-206	ENST00000509541	VGLL3	A8MV65	326 aa		11.26	□□□□□ -0.61
GCLC-206	ENST00000509541	PRDM10	Q9NQV6	1147 aa		11.25	□□□□□ -0.61
GCLC-206	ENST00000509541	NRAP	Q86VF7	1730 aa		11.25	□□□□□ -0.61
GCLC-206	ENST00000509541	ARID3C	A6NKF2	412 aa		11.24	□□□□□ -0.61
GCLC-206	ENST00000509541	RRP9	O43818	475 aa	Known RBP	11.24	□□□□□ -0.61
GCLC-206	ENST00000509541	ANKRD30B	Q9BXX2	1392 aa		11.24	□□□□□ -0.61
GCLC-206	ENST00000509541	ADAMTS7	Q9UKP4	1686 aa		11.23	□□□□□ -0.61
GCLC-206	ENST00000509541	GPRASP1	Q5JY77	1395 aa		11.23	□□□□□ -0.61
GCLC-206	ENST00000509541	COL18A1	P39060	1754 aa		11.23	□□□□□ -0.61
GCLC-206	ENST00000509541	ANKRD50	Q9ULJ7	1429 aa		11.23	□□□□□ -0.61
GCLC-206	ENST00000509541	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.23	□□□□□ -0.61
GCLC-206	ENST00000509541	MTUS2	Q5JR59	1369 aa		11.22	□□□□□ -0.61
GCLC-206	ENST00000509541	RGPD1	P0DJD0	1748 aa		11.22	□□□□□ -0.61
GCLC-206	ENST00000509541	WWC1	Q8IX03	1113 aa		11.21	□□□□□ -0.61
GCLC-206	ENST00000509541	CNPY4	Q8N129	248 aa		11.21	□□□□□ -0.61
GCLC-206	ENST00000509541	SHANK3	Q9BYB0	1731 aa		11.21	□□□□□ -0.61
GCLC-206	ENST00000509541	ABCC6	O95255	1503 aa		11.21	□□□□□ -0.62
GCLC-206	ENST00000509541	PATL2	C9JE40	543 aa	Known RBP	11.21	□□□□□ -0.62
GCLC-206	ENST00000509541	IGSF3	O75054	1194 aa		11.21	□□□□□ -0.62
GCLC-206	ENST00000509541	VASP	P50552	380 aa	Predicted RBP	11.21	□□□□□ -0.62
GCLC-206	ENST00000509541	NKTR	P30414	1462 aa	Known RBP	11.21	□□□□□ -0.62
GCLC-206	ENST00000509541	RGPD8	O14715	1765 aa	Predicted RBP	11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	PNN	Q9H307	717 aa	Known RBP	11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	KIF20B	Q96Q89	1820 aa		11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	IPO4	Q8TEX9	1081 aa	Known RBP	11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	SCAF11	Q99590	1463 aa	Known RBP	11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	NCOA3	Q9Y6Q9	1424 aa		11.2	□□□□□ -0.62
GCLC-206	ENST00000509541	CNKSR2	Q8WXI2	1034 aa		11.19	□□□□□ -0.62
GCLC-206	ENST00000509541	PEAK1	Q9H792	1746 aa		11.19	□□□□□ -0.62
GCLC-206	ENST00000509541	ADAMTS13	Q76LX8	1427 aa		11.19	□□□□□ -0.62
GCLC-206	ENST00000509541	KIF15	Q9NS87	1388 aa		11.19	□□□□□ -0.62
GCLC-206	ENST00000509541	SECISBP2L	Q93073	1101 aa	Known RBP	11.19	□□□□□ -0.62
GCLC-206	ENST00000509541	KDM4F	A0A1W2PPD8	638 aa		11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	CYB5RL	Q6IPT4	315 aa		11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	PTCH1	Q13635	1447 aa		11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	ZNF644	Q9H582	1327 aa	Predicted RBP	11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	PIK3C2A	O00443	1686 aa		11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	SETD5	Q9C0A6	1442 aa		11.18	□□□□□ -0.62
GCLC-206	ENST00000509541	TRIM52	Q96A61	297 aa		11.17	□□□□□ -0.62
GCLC-206	ENST00000509541	RALGAPB	Q86X10	1494 aa		11.17	□□□□□ -0.62
GCLC-206	ENST00000509541		E9PSI1	815 aa		11.17	□□□□□ -0.62
GCLC-206	ENST00000509541	VIRMA	Q69YN4	1812 aa	Known RBP	11.17	□□□□□ -0.62
GCLC-206	ENST00000509541	ECM2	O94769	699 aa	Predicted RBP	11.16	□□□□□ -0.62
GCLC-206	ENST00000509541	CHGA	P10645	457 aa	Known RBP	11.16	□□□□□ -0.62
GCLC-206	ENST00000509541	GTF2E1	P29083	439 aa	Predicted RBP	11.16	□□□□□ -0.62
GCLC-206	ENST00000509541	COL16A1	Q07092	1604 aa	Predicted RBP	11.15	□□□□□ -0.62
GCLC-206	ENST00000509541	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.15	□□□□□ -0.62
GCLC-206	ENST00000509541	RGPD4	Q7Z3J3	1758 aa		11.15	□□□□□ -0.62
GCLC-206	ENST00000509541	ANKRD30A	Q9BXX3	1397 aa		11.15	□□□□□ -0.62
GCLC-206	ENST00000509541	PLEKHD1	A6NEE1	506 aa		11.15	□□□□□ -0.62
GCLC-206	ENST00000509541	DHX57	Q6P158	1386 aa	Known RBP	11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	APP	P05067	770 aa		11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	FTSJ3	Q8IY81	847 aa	Known RBP	11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	ZNF428	Q96B54	188 aa		11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	NCL	P19338	710 aa	Known RBP	11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	NEUROD2	Q15784	382 aa		11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	EFCAB2	Q5VUJ9	269 aa		11.14	□□□□□ -0.63
GCLC-206	ENST00000509541	ANP32B	Q92688	251 aa	Known RBP	11.13	□□□□□ -0.63
GCLC-206	ENST00000509541	SLC4A2	P04920	1241 aa		11.13	□□□□□ -0.63
GCLC-206	ENST00000509541	RGL2	O15211	777 aa		11.13	□□□□□ -0.63
GCLC-206	ENST00000509541	FAM208A	Q9UK61	1670 aa	Known RBP	11.12	□□□□□ -0.63
GCLC-206	ENST00000509541	ZNF831	Q5JPB2	1677 aa		11.12	□□□□□ -0.63
GCLC-206	ENST00000509541	FAM43A	Q8N2R8	423 aa		11.12	□□□□□ -0.63
GCLC-206	ENST00000509541	BRPF1	P55201	1214 aa	Predicted RBP	11.12	□□□□□ -0.63
GCLC-206	ENST00000509541	GSE1	Q14687	1217 aa		11.12	□□□□□ -0.63
GCLC-206	ENST00000509541	STAC3	Q96MF2	364 aa		11.11	□□□□□ -0.63
GCLC-206	ENST00000509541	TNNT2	P45379	298 aa	Predicted RBP	11.11	□□□□□ -0.63
GCLC-206	ENST00000509541	NWD2	Q9ULI1	1742 aa		11.1	□□□□□ -0.63
GCLC-206	ENST00000509541	AEBP1	Q8IUX7	1158 aa		11.1	□□□□□ -0.63
GCLC-206	ENST00000509541	FAM69C	Q0P6D2	419 aa		11.09	□□□□□ -0.63
GCLC-206	ENST00000509541	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.09	□□□□□ -0.63
GCLC-206	ENST00000509541	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.09	□□□□□ -0.63
GCLC-206	ENST00000509541	PHLPP1	O60346	1717 aa		11.08	□□□□□ -0.64
GCLC-206	ENST00000509541	NECTIN2	Q92692	538 aa		11.08	□□□□□ -0.64
GCLC-206	ENST00000509541	PARP4	Q9UKK3	1724 aa	Known RBP	11.08	□□□□□ -0.64
GCLC-206	ENST00000509541	CCDC9	Q9Y3X0	531 aa	Known RBP	11.07	□□□□□ -0.64
GCLC-206	ENST00000509541	SIPA1L3	O60292	1781 aa	Predicted RBP	11.07	□□□□□ -0.64
GCLC-206	ENST00000509541	TULP4	Q9NRJ4	1543 aa		11.07	□□□□□ -0.64
GCLC-206	ENST00000509541	IPO9	Q96P70	1041 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms