RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 ADGRL3Q9HAR2 1447 aa23.66■■□□□ 1.38
NDFIP1-204ENST00000509436 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
NDFIP1-204ENST00000509436 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
NDFIP1-204ENST00000509436 SPHKAPQ2M3C7 1700 aa23.63■■□□□ 1.37
NDFIP1-204ENST00000509436 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
NDFIP1-204ENST00000509436 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
NDFIP1-204ENST00000509436 C1orf167Q5SNV9 1468 aa23.61■■□□□ 1.37
NDFIP1-204ENST00000509436 SLC4A1APQ9BWU0 796 aaKnown RBP23.6■■□□□ 1.37
NDFIP1-204ENST00000509436 MYOM2P54296 1465 aa23.6■■□□□ 1.37
NDFIP1-204ENST00000509436 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
NDFIP1-204ENST00000509436 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
NDFIP1-204ENST00000509436 GLI3P10071 1580 aa23.57■■□□□ 1.36
NDFIP1-204ENST00000509436 GJD4Q96KN9 370 aaPredicted RBP23.57■■□□□ 1.36
NDFIP1-204ENST00000509436 E9PCH4 1651 aa23.56■■□□□ 1.36
NDFIP1-204ENST00000509436 CHGAP10645 457 aaKnown RBP23.55■■□□□ 1.36
NDFIP1-204ENST00000509436 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
NDFIP1-204ENST00000509436 METP08581 1390 aa23.52■■□□□ 1.36
NDFIP1-204ENST00000509436 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
NDFIP1-204ENST00000509436 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
NDFIP1-204ENST00000509436 PSDA5PKW4 1024 aaPredicted RBP23.46■■□□□ 1.35
NDFIP1-204ENST00000509436 SF3B2Q13435 895 aaKnown RBP23.46■■□□□ 1.35
NDFIP1-204ENST00000509436 SLIT2O94813 1529 aa23.45■■□□□ 1.34
NDFIP1-204ENST00000509436 PXDNQ92626 1479 aa23.43■■□□□ 1.34
NDFIP1-204ENST00000509436 UNC5CLQ8IV45 518 aa23.41■■□□□ 1.34
NDFIP1-204ENST00000509436 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
NDFIP1-204ENST00000509436 YY1P25490 414 aa23.37■■□□□ 1.33
NDFIP1-204ENST00000509436 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
NDFIP1-204ENST00000509436 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
NDFIP1-204ENST00000509436 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
NDFIP1-204ENST00000509436 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
NDFIP1-204ENST00000509436 NPHP3Q7Z494 1330 aa23.34■■□□□ 1.33
NDFIP1-204ENST00000509436 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
NDFIP1-204ENST00000509436 BAG6P46379 1132 aa23.33■■□□□ 1.33
NDFIP1-204ENST00000509436 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
NDFIP1-204ENST00000509436 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
NDFIP1-204ENST00000509436 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
NDFIP1-204ENST00000509436 RGPD1P0DJD0 1748 aa23.31■■□□□ 1.32
NDFIP1-204ENST00000509436 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
NDFIP1-204ENST00000509436 CCDC144AA2RUR9 1427 aa23.31■■□□□ 1.32
NDFIP1-204ENST00000509436 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
NDFIP1-204ENST00000509436 KRT27Q7Z3Y8 459 aa23.3■■□□□ 1.32
NDFIP1-204ENST00000509436 CDC42BPGQ6DT37 1551 aa23.3■■□□□ 1.32
NDFIP1-204ENST00000509436 PLCH1Q4KWH8 1693 aa23.29■■□□□ 1.32
NDFIP1-204ENST00000509436 VPS72Q15906 364 aa23.28■■□□□ 1.32
NDFIP1-204ENST00000509436 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
NDFIP1-204ENST00000509436 KIF1BO60333 1816 aa23.26■■□□□ 1.31
NDFIP1-204ENST00000509436 DISP2A7MBM2 1401 aa23.25■■□□□ 1.31
NDFIP1-204ENST00000509436 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
NDFIP1-204ENST00000509436 CLTCL1P53675 1640 aa23.25■■□□□ 1.31
NDFIP1-204ENST00000509436 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
NDFIP1-204ENST00000509436 ESCO1Q5FWF5 840 aa23.23■■□□□ 1.31
NDFIP1-204ENST00000509436 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
NDFIP1-204ENST00000509436 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
NDFIP1-204ENST00000509436 FOXO3O43524 673 aa23.22■■□□□ 1.31
NDFIP1-204ENST00000509436 EN1Q05925 392 aaPredicted RBP23.22■■□□□ 1.31
NDFIP1-204ENST00000509436 ZNF326Q5BKZ1 582 aaKnown RBP23.22■■□□□ 1.31
NDFIP1-204ENST00000509436 LRPPRCP42704 1394 aaKnown RBP23.22■■□□□ 1.31
NDFIP1-204ENST00000509436 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
NDFIP1-204ENST00000509436 ABCA3Q99758 1704 aa23.19■■□□□ 1.3
NDFIP1-204ENST00000509436 NRAPQ86VF7 1730 aa23.17■■□□□ 1.3
NDFIP1-204ENST00000509436 IFFO2Q5TF58 517 aa23.17■■□□□ 1.3
NDFIP1-204ENST00000509436 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
NDFIP1-204ENST00000509436 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
NDFIP1-204ENST00000509436 CCDC9Q9Y3X0 531 aaKnown RBP23.11■■□□□ 1.29
NDFIP1-204ENST00000509436 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
NDFIP1-204ENST00000509436 RREB1Q92766 1687 aa23.1■■□□□ 1.29
NDFIP1-204ENST00000509436 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
NDFIP1-204ENST00000509436 FMN2Q9NZ56 1722 aa23.1■■□□□ 1.29
NDFIP1-204ENST00000509436 L3MBTL2Q969R5 705 aa23.09■■□□□ 1.29
NDFIP1-204ENST00000509436 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
NDFIP1-204ENST00000509436 CAMKK2Q96RR4 588 aa23.08■■□□□ 1.29
NDFIP1-204ENST00000509436 TNS3Q68CZ2 1445 aa23.08■■□□□ 1.28
NDFIP1-204ENST00000509436 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
NDFIP1-204ENST00000509436 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
NDFIP1-204ENST00000509436 NUP188Q5SRE5 1749 aa23.07■■□□□ 1.28
NDFIP1-204ENST00000509436 UTRNP46939 3433 aa23.06■■□□□ 1.28
NDFIP1-204ENST00000509436 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
NDFIP1-204ENST00000509436 PARD3Q8TEW0 1356 aa23.05■■□□□ 1.28
NDFIP1-204ENST00000509436 NINLQ9Y2I6 1382 aa23.04■■□□□ 1.28
NDFIP1-204ENST00000509436 A0A0G2JS52 829 aa23.04■■□□□ 1.28
NDFIP1-204ENST00000509436 MYT1Q01538 1121 aa23.04■■□□□ 1.28
NDFIP1-204ENST00000509436 FAM182BQ5T319 152 aa23.04■■□□□ 1.28
NDFIP1-204ENST00000509436 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
NDFIP1-204ENST00000509436 IFT172Q9UG01 1749 aa23.03■■□□□ 1.28
NDFIP1-204ENST00000509436 VGFO15240 615 aaPredicted RBP23.03■■□□□ 1.28
NDFIP1-204ENST00000509436 FAM83GA6ND36 823 aa23.02■■□□□ 1.28
NDFIP1-204ENST00000509436 KRT28Q7Z3Y7 464 aa23.02■■□□□ 1.28
NDFIP1-204ENST00000509436 PPLO60437 1756 aa23.01■■□□□ 1.27
NDFIP1-204ENST00000509436 HAP1P54257 671 aaPredicted RBP23.01■■□□□ 1.27
NDFIP1-204ENST00000509436 DCAF11Q8TEB1 546 aa23.01■■□□□ 1.27
NDFIP1-204ENST00000509436 TECPR2O15040 1411 aa23■■□□□ 1.27
NDFIP1-204ENST00000509436 NUTM2FA1L443 756 aa23■■□□□ 1.27
NDFIP1-204ENST00000509436 STAC3Q96MF2 364 aa23■■□□□ 1.27
NDFIP1-204ENST00000509436 RPGRIP1LQ68CZ1 1315 aa23■■□□□ 1.27
NDFIP1-204ENST00000509436 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
NDFIP1-204ENST00000509436 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
NDFIP1-204ENST00000509436 DCAF8L1A6NGE4 600 aa22.98■■□□□ 1.27
NDFIP1-204ENST00000509436 ZNF784Q8NCA9 323 aaPredicted RBP22.98■■□□□ 1.27
NDFIP1-204ENST00000509436 KNDC1Q76NI1 1749 aa22.98■■□□□ 1.27
NDFIP1-204ENST00000509436 SBNO1A3KN83 1393 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms