RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MYOM2P54296 1465 aa24.2■■□□□ 1.47
CXCL1-202ENST00000509101 ATRNO75882 1429 aa24.2■■□□□ 1.46
CXCL1-202ENST00000509101 RPGRIP1LQ68CZ1 1315 aa24.2■■□□□ 1.46
CXCL1-202ENST00000509101 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
CXCL1-202ENST00000509101 PXDNQ92626 1479 aa24.19■■□□□ 1.46
CXCL1-202ENST00000509101 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
CXCL1-202ENST00000509101 EP400Q96L91 3159 aa24.18■■□□□ 1.46
CXCL1-202ENST00000509101 FNBP4Q8N3X1 1017 aaPredicted RBP24.17■■□□□ 1.46
CXCL1-202ENST00000509101 SRCAPQ6ZRS2 3230 aa24.16■■□□□ 1.46
CXCL1-202ENST00000509101 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
CXCL1-202ENST00000509101 KNDC1Q76NI1 1749 aa24.16■■□□□ 1.46
CXCL1-202ENST00000509101 SLC4A1APQ9BWU0 796 aaKnown RBP24.16■■□□□ 1.46
CXCL1-202ENST00000509101 ESCO1Q5FWF5 840 aa24.15■■□□□ 1.46
CXCL1-202ENST00000509101 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
CXCL1-202ENST00000509101 FMN2Q9NZ56 1722 aa24.13■■□□□ 1.45
CXCL1-202ENST00000509101 XPCQ01831 940 aaPredicted RBP24.12■■□□□ 1.45
CXCL1-202ENST00000509101 BCL9LQ86UU0 1499 aa24.12■■□□□ 1.45
CXCL1-202ENST00000509101 KIF1AQ12756 1690 aa24.11■■□□□ 1.45
CXCL1-202ENST00000509101 TECPR2O15040 1411 aa24.1■■□□□ 1.45
CXCL1-202ENST00000509101 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
CXCL1-202ENST00000509101 FOXO3O43524 673 aa24.09■■□□□ 1.45
CXCL1-202ENST00000509101 FOXD1Q16676 465 aa24.09■■□□□ 1.45
CXCL1-202ENST00000509101 NUTM2FA1L443 756 aa24.08■■□□□ 1.45
CXCL1-202ENST00000509101 CCDC144AA2RUR9 1427 aa24.08■■□□□ 1.44
CXCL1-202ENST00000509101 STK26Q9P289 416 aa24.07■■□□□ 1.44
CXCL1-202ENST00000509101 RGPD8O14715 1765 aaPredicted RBP24.06■■□□□ 1.44
CXCL1-202ENST00000509101 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
CXCL1-202ENST00000509101 WAPLQ7Z5K2 1190 aa24.06■■□□□ 1.44
CXCL1-202ENST00000509101 GLI3P10071 1580 aa24.06■■□□□ 1.44
CXCL1-202ENST00000509101 USP32Q8NFA0 1604 aa24.06■■□□□ 1.44
CXCL1-202ENST00000509101 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
CXCL1-202ENST00000509101 PLEKHH1Q9ULM0 1364 aa24.04■■□□□ 1.44
CXCL1-202ENST00000509101 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
CXCL1-202ENST00000509101 RGL3Q3MIN7 710 aa24.02■■□□□ 1.44
CXCL1-202ENST00000509101 GJD4Q96KN9 370 aaPredicted RBP24.02■■□□□ 1.44
CXCL1-202ENST00000509101 ZRANB1Q9UGI0 708 aa24.02■■□□□ 1.44
CXCL1-202ENST00000509101 ANKRD30BQ9BXX2 1392 aa24.02■■□□□ 1.44
CXCL1-202ENST00000509101 PIK3C2GO75747 1445 aa24.01■■□□□ 1.43
CXCL1-202ENST00000509101 ABCA3Q99758 1704 aa24.01■■□□□ 1.43
CXCL1-202ENST00000509101 SLIT2O94813 1529 aa24.01■■□□□ 1.43
CXCL1-202ENST00000509101 PLCH1Q4KWH8 1693 aa24.01■■□□□ 1.43
CXCL1-202ENST00000509101 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
CXCL1-202ENST00000509101 TMEM132EQ6IEE7 984 aa24■■□□□ 1.43
CXCL1-202ENST00000509101 ABCC11Q96J66 1382 aa24■■□□□ 1.43
CXCL1-202ENST00000509101 YTHDC2Q9H6S0 1430 aaKnown RBP23.99■■□□□ 1.43
CXCL1-202ENST00000509101 SPATA31A3Q5VYP0 1347 aa23.98■■□□□ 1.43
CXCL1-202ENST00000509101 NWD2Q9ULI1 1742 aa23.96■■□□□ 1.43
CXCL1-202ENST00000509101 CCDC125Q86Z20 511 aa23.96■■□□□ 1.43
CXCL1-202ENST00000509101 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
CXCL1-202ENST00000509101 TNS3Q68CZ2 1445 aa23.94■■□□□ 1.42
CXCL1-202ENST00000509101 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
CXCL1-202ENST00000509101 KRT28Q7Z3Y7 464 aa23.92■■□□□ 1.42
CXCL1-202ENST00000509101 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
CXCL1-202ENST00000509101 MPHOSPH9Q99550 1183 aa23.9■■□□□ 1.42
CXCL1-202ENST00000509101 PLEKHG5O94827 1062 aa23.89■■□□□ 1.41
CXCL1-202ENST00000509101 NRXN1Q9ULB1 1477 aa23.88■■□□□ 1.41
CXCL1-202ENST00000509101 PHF8Q9UPP1 1060 aa23.88■■□□□ 1.41
CXCL1-202ENST00000509101 CABLES1Q8TDN4 633 aa23.87■■□□□ 1.41
CXCL1-202ENST00000509101 NRAPQ86VF7 1730 aa23.87■■□□□ 1.41
CXCL1-202ENST00000509101 DEFB132Q7Z7B7 95 aa23.85■■□□□ 1.41
CXCL1-202ENST00000509101 SEPT12Q8IYM1 358 aa23.85■■□□□ 1.41
CXCL1-202ENST00000509101 TRPM3Q9HCF6 1732 aaPredicted RBP23.84■■□□□ 1.41
CXCL1-202ENST00000509101 SBNO1A3KN83 1393 aa23.84■■□□□ 1.41
CXCL1-202ENST00000509101 PSME1Q06323 249 aa23.84■■□□□ 1.41
CXCL1-202ENST00000509101 ADGRB2O60241 1585 aa23.83■■□□□ 1.41
CXCL1-202ENST00000509101 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
CXCL1-202ENST00000509101 SAFB2Q14151 953 aaKnown RBP eCLIP23.83■■□□□ 1.41
CXCL1-202ENST00000509101 VPS72Q15906 364 aa23.83■■□□□ 1.41
CXCL1-202ENST00000509101 LMOD2Q6P5Q4 547 aa23.83■■□□□ 1.41
CXCL1-202ENST00000509101 SIRT1Q96EB6 747 aa23.83■■□□□ 1.41
CXCL1-202ENST00000509101 C14orf93Q9H972 538 aaKnown RBP23.83■■□□□ 1.41
CXCL1-202ENST00000509101 CCDC9Q9Y3X0 531 aaKnown RBP23.83■■□□□ 1.41
CXCL1-202ENST00000509101 ARHGEF10O15013 1369 aa23.82■■□□□ 1.4
CXCL1-202ENST00000509101 CFAP70Q5T0N1 1121 aa23.82■■□□□ 1.4
CXCL1-202ENST00000509101 DLC1Q96QB1 1528 aa23.81■■□□□ 1.4
CXCL1-202ENST00000509101 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
CXCL1-202ENST00000509101 LRP5O75197 1615 aa23.81■■□□□ 1.4
CXCL1-202ENST00000509101 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
CXCL1-202ENST00000509101 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
CXCL1-202ENST00000509101 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
CXCL1-202ENST00000509101 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
CXCL1-202ENST00000509101 CRYBG1Q9Y4K1 1723 aa23.77■■□□□ 1.4
CXCL1-202ENST00000509101 PMFBP1Q8TBY8 1022 aa23.77■■□□□ 1.4
CXCL1-202ENST00000509101 KRT27Q7Z3Y8 459 aa23.76■■□□□ 1.39
CXCL1-202ENST00000509101 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
CXCL1-202ENST00000509101 A0A0G2JS52 829 aa23.75■■□□□ 1.39
CXCL1-202ENST00000509101 MYT1Q01538 1121 aa23.75■■□□□ 1.39
CXCL1-202ENST00000509101 POGKQ9P215 609 aa23.75■■□□□ 1.39
CXCL1-202ENST00000509101 RGPD1P0DJD0 1748 aa23.75■■□□□ 1.39
CXCL1-202ENST00000509101 ONECUT3O60422 494 aaPredicted RBP23.74■■□□□ 1.39
CXCL1-202ENST00000509101 FAM83GA6ND36 823 aa23.73■■□□□ 1.39
CXCL1-202ENST00000509101 TULP4Q9NRJ4 1543 aa23.71■■□□□ 1.39
CXCL1-202ENST00000509101 FAM98CQ17RN3 349 aaKnown RBP23.7■■□□□ 1.38
CXCL1-202ENST00000509101 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
CXCL1-202ENST00000509101 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
CXCL1-202ENST00000509101 ITSN1Q15811 1721 aa23.69■■□□□ 1.38
CXCL1-202ENST00000509101 TNS1Q9HBL0 1735 aaKnown RBP23.69■■□□□ 1.38
CXCL1-202ENST00000509101 THSD7AQ9UPZ6 1657 aa23.68■■□□□ 1.38
CXCL1-202ENST00000509101 EIF3AQ14152 1382 aaKnown RBP23.67■■□□□ 1.38
CXCL1-202ENST00000509101 GPRASP1Q5JY77 1395 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms