RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
COPS4-206ENST00000509093 SBNO2Q9Y2G9 1366 aa14.88□□□□□ -0.03
COPS4-206ENST00000509093 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
COPS4-206ENST00000509093 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
COPS4-206ENST00000509093 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
COPS4-206ENST00000509093 METP08581 1390 aa14.86□□□□□ -0.03
COPS4-206ENST00000509093 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
COPS4-206ENST00000509093 SETD1AO15047 1707 aaKnown RBP14.86□□□□□ -0.03
COPS4-206ENST00000509093 KDM5AP29375 1690 aaKnown RBP14.86□□□□□ -0.03
COPS4-206ENST00000509093 MYOM1P52179 1685 aa14.86□□□□□ -0.03
COPS4-206ENST00000509093 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
COPS4-206ENST00000509093 CC2D1BQ5T0F9 858 aaKnown RBP14.85□□□□□ -0.03
COPS4-206ENST00000509093 TXNDC2Q86VQ3 553 aa14.85□□□□□ -0.03
COPS4-206ENST00000509093 NUDCQ9Y266 331 aa14.85□□□□□ -0.03
COPS4-206ENST00000509093 HDGFP51858 240 aaKnown RBP14.84□□□□□ -0.03
COPS4-206ENST00000509093 UBE2Q2Q8WVN8 375 aa14.83□□□□□ -0.03
COPS4-206ENST00000509093 TULP4Q9NRJ4 1543 aa14.83□□□□□ -0.03
COPS4-206ENST00000509093 MINK1Q8N4C8 1332 aaPredicted RBP14.83□□□□□ -0.04
COPS4-206ENST00000509093 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
COPS4-206ENST00000509093 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
COPS4-206ENST00000509093 PLEKHH1Q9ULM0 1364 aa14.83□□□□□ -0.04
COPS4-206ENST00000509093 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
COPS4-206ENST00000509093 POGKQ9P215 609 aa14.82□□□□□ -0.04
COPS4-206ENST00000509093 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
COPS4-206ENST00000509093 ADAMTS13Q76LX8 1427 aa14.81□□□□□ -0.04
COPS4-206ENST00000509093 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
COPS4-206ENST00000509093 SLC12A5Q9H2X9 1139 aa14.81□□□□□ -0.04
COPS4-206ENST00000509093 KTN1Q86UP2 1357 aaKnown RBP14.81□□□□□ -0.04
COPS4-206ENST00000509093 ARHGAP23Q9P227 1491 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 RALBP1Q15311 655 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 THEMISQ8N1K5 641 aaPredicted RBP14.8□□□□□ -0.04
COPS4-206ENST00000509093 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 SLC26A8Q96RN1 970 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 PARD3Q8TEW0 1356 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 SLIT1O75093 1534 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 PLEKHG1Q9ULL1 1385 aa14.8□□□□□ -0.04
COPS4-206ENST00000509093 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
COPS4-206ENST00000509093 NEFMP07197 916 aa14.79□□□□□ -0.04
COPS4-206ENST00000509093 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
COPS4-206ENST00000509093 KNSTRNQ9Y448 316 aa14.79□□□□□ -0.04
COPS4-206ENST00000509093 EID1Q9Y6B2 187 aa14.79□□□□□ -0.04
COPS4-206ENST00000509093 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
COPS4-206ENST00000509093 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
COPS4-206ENST00000509093 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.78□□□□□ -0.04
COPS4-206ENST00000509093 CEP170BQ9Y4F5 1589 aaPredicted RBP14.78□□□□□ -0.04
COPS4-206ENST00000509093 DLC1Q96QB1 1528 aa14.77□□□□□ -0.05
COPS4-206ENST00000509093 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
COPS4-206ENST00000509093 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
COPS4-206ENST00000509093 MED14O60244 1454 aa14.75□□□□□ -0.05
COPS4-206ENST00000509093 CDK19Q9BWU1 502 aa14.75□□□□□ -0.05
COPS4-206ENST00000509093 PTPRUQ92729 1446 aa14.74□□□□□ -0.05
COPS4-206ENST00000509093 PUS7Q96PZ0 661 aaKnown RBP14.74□□□□□ -0.05
COPS4-206ENST00000509093 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
COPS4-206ENST00000509093 ROBO2Q9HCK4 1378 aa14.74□□□□□ -0.05
COPS4-206ENST00000509093 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
COPS4-206ENST00000509093 TECPR2O15040 1411 aa14.72□□□□□ -0.05
COPS4-206ENST00000509093 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
COPS4-206ENST00000509093 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
COPS4-206ENST00000509093 NPM2Q86SE8 214 aaKnown RBP14.72□□□□□ -0.05
COPS4-206ENST00000509093 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
COPS4-206ENST00000509093 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
COPS4-206ENST00000509093 MS4A1P11836 297 aa14.71□□□□□ -0.06
COPS4-206ENST00000509093 PDE4AP27815 886 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 PPP2R1AP30153 589 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 CPS1P31327 1500 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 FAM135BQ49AJ0 1406 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
COPS4-206ENST00000509093 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
COPS4-206ENST00000509093 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
COPS4-206ENST00000509093 ZNF142P52746 1687 aaPredicted RBP14.69□□□□□ -0.06
COPS4-206ENST00000509093 NPC1L1Q9UHC9 1359 aa14.69□□□□□ -0.06
COPS4-206ENST00000509093 WASLO00401 505 aaPredicted RBP14.68□□□□□ -0.06
COPS4-206ENST00000509093 BACH2Q9BYV9 841 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 ATAD2Q6PL18 1390 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 ANKRD36BQ8N2N9 1353 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 ANKLE2Q86XL3 938 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 A0A1W2PP64 1363 aa14.68□□□□□ -0.06
COPS4-206ENST00000509093 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
COPS4-206ENST00000509093 CD163L1Q9NR16 1453 aa14.67□□□□□ -0.06
COPS4-206ENST00000509093 SETD1BQ9UPS6 1966 aaKnown RBP14.66□□□□□ -0.06
COPS4-206ENST00000509093 GSE1Q14687 1217 aa14.66□□□□□ -0.06
COPS4-206ENST00000509093 BRPF3Q9ULD4 1205 aa14.66□□□□□ -0.06
COPS4-206ENST00000509093 DDRGK1Q96HY6 314 aa14.66□□□□□ -0.06
COPS4-206ENST00000509093 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.65□□□□□ -0.06
COPS4-206ENST00000509093 RRP1P56182 461 aaKnown RBP14.65□□□□□ -0.06
COPS4-206ENST00000509093 NINLQ9Y2I6 1382 aa14.64□□□□□ -0.07
COPS4-206ENST00000509093 KCNA6P17658 529 aa14.64□□□□□ -0.07
COPS4-206ENST00000509093 TNNT2P45379 298 aaPredicted RBP14.64□□□□□ -0.07
COPS4-206ENST00000509093 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
COPS4-206ENST00000509093 DIP2AQ14689 1571 aa14.63□□□□□ -0.07
COPS4-206ENST00000509093 PRR36Q9H6K5 1346 aa14.63□□□□□ -0.07
COPS4-206ENST00000509093 CGNL1Q0VF96 1302 aa14.63□□□□□ -0.07
COPS4-206ENST00000509093 NUTM2FA1L443 756 aa14.62□□□□□ -0.07
COPS4-206ENST00000509093 MORC1Q86VD1 984 aa14.62□□□□□ -0.07
COPS4-206ENST00000509093 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
COPS4-206ENST00000509093 EXOC6Q8TAG9 804 aa14.61□□□□□ -0.07
COPS4-206ENST00000509093 PPIP5K1Q6PFW1 1433 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms