RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 LRRC59Q96AG4 307 aaKnown RBP33.83■■■■□ 3.01
RETREG1-204ENST00000509048 YTHDC2Q9H6S0 1430 aaKnown RBP33.83■■■■□ 3.01
RETREG1-204ENST00000509048 WAPLQ7Z5K2 1190 aa33.81■■■■□ 3
RETREG1-204ENST00000509048 ORAI2Q96SN7 254 aa33.81■■■■□ 3
RETREG1-204ENST00000509048 PLEKHH1Q9ULM0 1364 aa33.77■■■■□ 3
RETREG1-204ENST00000509048 CFAP70Q5T0N1 1121 aa33.77■■■■□ 3
RETREG1-204ENST00000509048 MEX3CQ5U5Q3 659 aaKnown RBP33.76■■■□□ 2.99
RETREG1-204ENST00000509048 SIRT1Q96EB6 747 aa33.76■■■□□ 2.99
RETREG1-204ENST00000509048 PNPLA6Q8IY17 1366 aa33.75■■■□□ 2.99
RETREG1-204ENST00000509048 SOS2Q07890 1332 aaPredicted RBP33.75■■■□□ 2.99
RETREG1-204ENST00000509048 DHX57Q6P158 1386 aaKnown RBP33.73■■■□□ 2.99
RETREG1-204ENST00000509048 NUTM2BA6NNL0 878 aaPredicted RBP33.71■■■□□ 2.99
RETREG1-204ENST00000509048 NUTM2EB1AL46 878 aaPredicted RBP33.71■■■□□ 2.99
RETREG1-204ENST00000509048 NUTM2AQ8IVF1 878 aaPredicted RBP33.71■■■□□ 2.99
RETREG1-204ENST00000509048 ESCO1Q5FWF5 840 aa33.68■■■□□ 2.98
RETREG1-204ENST00000509048 ZNF772Q68DY9 489 aaPredicted RBP33.67■■■□□ 2.98
RETREG1-204ENST00000509048 ADGRB1O14514 1584 aa33.66■■■□□ 2.98
RETREG1-204ENST00000509048 STAC3Q96MF2 364 aa33.66■■■□□ 2.98
RETREG1-204ENST00000509048 FMN2Q9NZ56 1722 aa33.65■■■□□ 2.98
RETREG1-204ENST00000509048 DCAF11Q8TEB1 546 aa33.65■■■□□ 2.98
RETREG1-204ENST00000509048 DLC1Q96QB1 1528 aa33.64■■■□□ 2.98
RETREG1-204ENST00000509048 NPHP3Q7Z494 1330 aa33.64■■■□□ 2.98
RETREG1-204ENST00000509048 PXDNQ92626 1479 aa33.62■■■□□ 2.97
RETREG1-204ENST00000509048 NUTM2FA1L443 756 aa33.61■■■□□ 2.97
RETREG1-204ENST00000509048 KDM2AQ9Y2K7 1162 aa33.61■■■□□ 2.97
RETREG1-204ENST00000509048 PRAM1Q96QH2 718 aa33.6■■■□□ 2.97
RETREG1-204ENST00000509048 FOXO3O43524 673 aa33.58■■■□□ 2.97
RETREG1-204ENST00000509048 COL22A1Q8NFW1 1626 aaPredicted RBP33.57■■■□□ 2.97
RETREG1-204ENST00000509048 AFF2P51816 1311 aa33.57■■■□□ 2.97
RETREG1-204ENST00000509048 KIF1AQ12756 1690 aa33.55■■■□□ 2.96
RETREG1-204ENST00000509048 SAFB2Q14151 953 aaKnown RBP eCLIP33.53■■■□□ 2.96
RETREG1-204ENST00000509048 C8orf37Q96NL8 207 aa33.53■■■□□ 2.96
RETREG1-204ENST00000509048 POGKQ9P215 609 aa33.52■■■□□ 2.96
RETREG1-204ENST00000509048 TRAK1Q9UPV9 953 aa33.51■■■□□ 2.95
RETREG1-204ENST00000509048 ADGRB2O60241 1585 aa33.51■■■□□ 2.95
RETREG1-204ENST00000509048 XPCQ01831 940 aaPredicted RBP33.5■■■□□ 2.95
RETREG1-204ENST00000509048 ADAMTS2O95450 1211 aa33.49■■■□□ 2.95
RETREG1-204ENST00000509048 RGPD8O14715 1765 aaPredicted RBP33.47■■■□□ 2.95
RETREG1-204ENST00000509048 RXRBP28702 533 aa33.47■■■□□ 2.95
RETREG1-204ENST00000509048 ANKARQ7Z5J8 1434 aa33.45■■■□□ 2.94
RETREG1-204ENST00000509048 NGLY1Q96IV0 654 aa33.44■■■□□ 2.94
RETREG1-204ENST00000509048 PHF8Q9UPP1 1060 aa33.44■■■□□ 2.94
RETREG1-204ENST00000509048 CDK12Q9NYV4 1490 aaPredicted RBP33.44■■■□□ 2.94
RETREG1-204ENST00000509048 SPATA31A3Q5VYP0 1347 aa33.42■■■□□ 2.94
RETREG1-204ENST00000509048 USP32Q8NFA0 1604 aa33.42■■■□□ 2.94
RETREG1-204ENST00000509048 KRT28Q7Z3Y7 464 aa33.41■■■□□ 2.94
RETREG1-204ENST00000509048 QTRT2Q9H974 415 aaKnown RBP33.4■■■□□ 2.94
RETREG1-204ENST00000509048 MINK1Q8N4C8 1332 aaPredicted RBP33.38■■■□□ 2.93
RETREG1-204ENST00000509048 FNBP4Q8N3X1 1017 aaPredicted RBP33.38■■■□□ 2.93
RETREG1-204ENST00000509048 HIRIP3Q9BW71 556 aaPredicted RBP33.38■■■□□ 2.93
RETREG1-204ENST00000509048 ARHGEF28Q8N1W1 1705 aaKnown RBP33.38■■■□□ 2.93
RETREG1-204ENST00000509048 KIAA1210Q9ULL0 1709 aa33.38■■■□□ 2.93
RETREG1-204ENST00000509048 EIF3AQ14152 1382 aaKnown RBP33.35■■■□□ 2.93
RETREG1-204ENST00000509048 RBM6P78332 1123 aaKnown RBP33.35■■■□□ 2.93
RETREG1-204ENST00000509048 TULP4Q9NRJ4 1543 aa33.34■■■□□ 2.93
RETREG1-204ENST00000509048 MARF1Q9Y4F3 1742 aaKnown RBP33.34■■■□□ 2.93
RETREG1-204ENST00000509048 PSME1Q06323 249 aa33.34■■■□□ 2.93
RETREG1-204ENST00000509048 TNS3Q68CZ2 1445 aa33.34■■■□□ 2.93
RETREG1-204ENST00000509048 WASLO00401 505 aaPredicted RBP33.33■■■□□ 2.93
RETREG1-204ENST00000509048 USP21Q9UK80 565 aa33.33■■■□□ 2.93
RETREG1-204ENST00000509048 SBNO1A3KN83 1393 aa33.33■■■□□ 2.93
RETREG1-204ENST00000509048 PRR36Q9H6K5 1346 aa33.3■■■□□ 2.92
RETREG1-204ENST00000509048 PMFBP1Q8TBY8 1022 aa33.3■■■□□ 2.92
RETREG1-204ENST00000509048 RGS12O14924 1447 aa33.29■■■□□ 2.92
RETREG1-204ENST00000509048 TRPC5Q9UL62 973 aaPredicted RBP33.28■■■□□ 2.92
RETREG1-204ENST00000509048 ATRNO75882 1429 aa33.27■■■□□ 2.92
RETREG1-204ENST00000509048 BCL9LQ86UU0 1499 aa33.26■■■□□ 2.92
RETREG1-204ENST00000509048 NBPF1Q3BBV0 1214 aa33.25■■■□□ 2.91
RETREG1-204ENST00000509048 ARHGEF10O15013 1369 aa33.24■■■□□ 2.91
RETREG1-204ENST00000509048 TRPM3Q9HCF6 1732 aaPredicted RBP33.22■■■□□ 2.91
RETREG1-204ENST00000509048 UPF1Q92900 1129 aaKnown RBP eCLIP33.22■■■□□ 2.91
RETREG1-204ENST00000509048 ATP7BP35670 1465 aa33.21■■■□□ 2.91
RETREG1-204ENST00000509048 L3MBTL2Q969R5 705 aa33.21■■■□□ 2.91
RETREG1-204ENST00000509048 SLIT2O94813 1529 aa33.19■■■□□ 2.9
RETREG1-204ENST00000509048 GPRASP1Q5JY77 1395 aa33.19■■■□□ 2.9
RETREG1-204ENST00000509048 SIN3AQ96ST3 1273 aa33.18■■■□□ 2.9
RETREG1-204ENST00000509048 ABCA3Q99758 1704 aa33.18■■■□□ 2.9
RETREG1-204ENST00000509048 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.18■■■□□ 2.9
RETREG1-204ENST00000509048 ITSN1Q15811 1721 aa33.17■■■□□ 2.9
RETREG1-204ENST00000509048 CABLES1Q8TDN4 633 aa33.17■■■□□ 2.9
RETREG1-204ENST00000509048 LMOD2Q6P5Q4 547 aa33.16■■■□□ 2.9
RETREG1-204ENST00000509048 NUDT16Q96DE0 195 aaKnown RBP33.16■■■□□ 2.9
RETREG1-204ENST00000509048 ALS2Q96Q42 1657 aa33.16■■■□□ 2.9
RETREG1-204ENST00000509048 CDK19Q9BWU1 502 aa33.15■■■□□ 2.9
RETREG1-204ENST00000509048 HAP1P54257 671 aaPredicted RBP33.14■■■□□ 2.9
RETREG1-204ENST00000509048 UNC5CLQ8IV45 518 aa33.13■■■□□ 2.89
RETREG1-204ENST00000509048 NGDNQ8NEJ9 315 aaKnown RBP33.13■■■□□ 2.89
RETREG1-204ENST00000509048 TOPAZ1Q8N9V7 1692 aa33.1■■■□□ 2.89
RETREG1-204ENST00000509048 GJD4Q96KN9 370 aaPredicted RBP33.1■■■□□ 2.89
RETREG1-204ENST00000509048 NEUROD1Q13562 356 aa33.09■■■□□ 2.89
RETREG1-204ENST00000509048 CENPJQ9HC77 1338 aaPredicted RBP33.08■■■□□ 2.89
RETREG1-204ENST00000509048 EP400Q96L91 3159 aa33.08■■■□□ 2.89
RETREG1-204ENST00000509048 TRPM1Q7Z4N2 1603 aa33.07■■■□□ 2.88
RETREG1-204ENST00000509048 PLEKHG5O94827 1062 aa33.07■■■□□ 2.88
RETREG1-204ENST00000509048 NWD2Q9ULI1 1742 aa33.06■■■□□ 2.88
RETREG1-204ENST00000509048 CCDC61Q9Y6R9 512 aa33.06■■■□□ 2.88
RETREG1-204ENST00000509048 PLCH1Q4KWH8 1693 aa33.06■■■□□ 2.88
RETREG1-204ENST00000509048 POLR3AO14802 1390 aaPredicted RBP33.06■■■□□ 2.88
RETREG1-204ENST00000509048 RALGAPBQ86X10 1494 aa33.04■■■□□ 2.88
RETREG1-204ENST00000509048 GLI3P10071 1580 aa33.03■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms