RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 C1orf167Q5SNV9 1468 aa26.42■■□□□ 1.82
CLDND1-220ENST00000508902 BRINP3Q76B58 766 aa26.42■■□□□ 1.82
CLDND1-220ENST00000508902 STAC3Q96MF2 364 aa26.42■■□□□ 1.82
CLDND1-220ENST00000508902 FMN2Q9NZ56 1722 aa26.42■■□□□ 1.82
CLDND1-220ENST00000508902 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
CLDND1-220ENST00000508902 MED1Q15648 1581 aaPredicted RBP26.4■■□□□ 1.82
CLDND1-220ENST00000508902 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.81
CLDND1-220ENST00000508902 SIRT1Q96EB6 747 aa26.38■■□□□ 1.81
CLDND1-220ENST00000508902 PCGF6Q9BYE7 350 aa26.38■■□□□ 1.81
CLDND1-220ENST00000508902 ADGRB2O60241 1585 aa26.37■■□□□ 1.81
CLDND1-220ENST00000508902 NBPF1Q3BBV0 1214 aa26.36■■□□□ 1.81
CLDND1-220ENST00000508902 PRAM1Q96QH2 718 aa26.36■■□□□ 1.81
CLDND1-220ENST00000508902 RGPD8O14715 1765 aaPredicted RBP26.35■■□□□ 1.81
CLDND1-220ENST00000508902 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
CLDND1-220ENST00000508902 DDX17Q92841 729 aaKnown RBP26.34■■□□□ 1.81
CLDND1-220ENST00000508902 USP32Q8NFA0 1604 aa26.33■■□□□ 1.81
CLDND1-220ENST00000508902 SAFB2Q14151 953 aaKnown RBP eCLIP26.32■■□□□ 1.8
CLDND1-220ENST00000508902 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
CLDND1-220ENST00000508902 SHPRHQ149N8 1683 aa26.28■■□□□ 1.8
CLDND1-220ENST00000508902 NBPF8Q3BBV2 869 aa26.28■■□□□ 1.8
CLDND1-220ENST00000508902 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
CLDND1-220ENST00000508902 DISP3Q9P2K9 1392 aa26.23■■□□□ 1.79
CLDND1-220ENST00000508902 POGKQ9P215 609 aa26.23■■□□□ 1.79
CLDND1-220ENST00000508902 LRP6O75581 1613 aa26.23■■□□□ 1.79
CLDND1-220ENST00000508902 MINK1Q8N4C8 1332 aaPredicted RBP26.22■■□□□ 1.79
CLDND1-220ENST00000508902 HIRIP3Q9BW71 556 aaPredicted RBP26.22■■□□□ 1.79
CLDND1-220ENST00000508902 PXDNQ92626 1479 aa26.22■■□□□ 1.79
CLDND1-220ENST00000508902 JCADQ9P266 1359 aa26.21■■□□□ 1.79
CLDND1-220ENST00000508902 KIF1AQ12756 1690 aa26.2■■□□□ 1.78
CLDND1-220ENST00000508902 PRR36Q9H6K5 1346 aa26.19■■□□□ 1.78
CLDND1-220ENST00000508902 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
CLDND1-220ENST00000508902 SOS2Q07890 1332 aaPredicted RBP26.18■■□□□ 1.78
CLDND1-220ENST00000508902 TULP4Q9NRJ4 1543 aa26.18■■□□□ 1.78
CLDND1-220ENST00000508902 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
CLDND1-220ENST00000508902 ESCO1Q5FWF5 840 aa26.17■■□□□ 1.78
CLDND1-220ENST00000508902 GPRASP1Q5JY77 1395 aa26.17■■□□□ 1.78
CLDND1-220ENST00000508902 RALGAPBQ86X10 1494 aa26.16■■□□□ 1.78
CLDND1-220ENST00000508902 ANKARQ7Z5J8 1434 aa26.15■■□□□ 1.78
CLDND1-220ENST00000508902 ILDR2Q71H61 639 aa26.15■■□□□ 1.78
CLDND1-220ENST00000508902 ATP7BP35670 1465 aa26.15■■□□□ 1.78
CLDND1-220ENST00000508902 TOPAZ1Q8N9V7 1692 aa26.15■■□□□ 1.78
CLDND1-220ENST00000508902 PNPLA6Q8IY17 1366 aa26.14■■□□□ 1.78
CLDND1-220ENST00000508902 ROCK2O75116 1388 aaKnown RBP26.13■■□□□ 1.77
CLDND1-220ENST00000508902 WASLO00401 505 aaPredicted RBP26.12■■□□□ 1.77
CLDND1-220ENST00000508902 COL22A1Q8NFW1 1626 aaPredicted RBP26.11■■□□□ 1.77
CLDND1-220ENST00000508902 FOXO3O43524 673 aa26.11■■□□□ 1.77
CLDND1-220ENST00000508902 XPCQ01831 940 aaPredicted RBP26.11■■□□□ 1.77
CLDND1-220ENST00000508902 RGS17Q9UGC6 210 aaPredicted RBP26.1■■□□□ 1.77
CLDND1-220ENST00000508902 SOCS7O14512 581 aa26.08■■□□□ 1.77
CLDND1-220ENST00000508902 NPHP3Q7Z494 1330 aa26.08■■□□□ 1.77
CLDND1-220ENST00000508902 CENPJQ9HC77 1338 aaPredicted RBP26.08■■□□□ 1.77
CLDND1-220ENST00000508902 ITSN1Q15811 1721 aa26.08■■□□□ 1.76
CLDND1-220ENST00000508902 TRPM3Q9HCF6 1732 aaPredicted RBP26.08■■□□□ 1.76
CLDND1-220ENST00000508902 LRRC59Q96AG4 307 aaKnown RBP26.06■■□□□ 1.76
CLDND1-220ENST00000508902 PHF8Q9UPP1 1060 aa26.06■■□□□ 1.76
CLDND1-220ENST00000508902 SPATA31A6Q5VVP1 1343 aa26.06■■□□□ 1.76
CLDND1-220ENST00000508902 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
CLDND1-220ENST00000508902 PMFBP1Q8TBY8 1022 aa26.03■■□□□ 1.76
CLDND1-220ENST00000508902 CDK19Q9BWU1 502 aa26.03■■□□□ 1.76
CLDND1-220ENST00000508902 EIF3AQ14152 1382 aaKnown RBP26.01■■□□□ 1.75
CLDND1-220ENST00000508902 ALS2Q96Q42 1657 aa26■■□□□ 1.75
CLDND1-220ENST00000508902 ABCA3Q99758 1704 aa26■■□□□ 1.75
CLDND1-220ENST00000508902 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
CLDND1-220ENST00000508902 KRT28Q7Z3Y7 464 aa25.98■■□□□ 1.75
CLDND1-220ENST00000508902 TNS3Q68CZ2 1445 aa25.97■■□□□ 1.75
CLDND1-220ENST00000508902 SPATA31A3Q5VYP0 1347 aa25.97■■□□□ 1.75
CLDND1-220ENST00000508902 NUTM2BA6NNL0 878 aaPredicted RBP25.97■■□□□ 1.75
CLDND1-220ENST00000508902 NUTM2EB1AL46 878 aaPredicted RBP25.97■■□□□ 1.75
CLDND1-220ENST00000508902 NUTM2AQ8IVF1 878 aaPredicted RBP25.97■■□□□ 1.75
CLDND1-220ENST00000508902 CARD11Q9BXL7 1154 aa25.96■■□□□ 1.75
CLDND1-220ENST00000508902 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
CLDND1-220ENST00000508902 PHF23Q9BUL5 403 aaPredicted RBP25.95■■□□□ 1.74
CLDND1-220ENST00000508902 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
CLDND1-220ENST00000508902 CABP2Q9NPB3 220 aa25.94■■□□□ 1.74
CLDND1-220ENST00000508902 SBNO1A3KN83 1393 aa25.94■■□□□ 1.74
CLDND1-220ENST00000508902 POTEAQ6S8J7 498 aa25.93■■□□□ 1.74
CLDND1-220ENST00000508902 POLR3AO14802 1390 aaPredicted RBP25.92■■□□□ 1.74
CLDND1-220ENST00000508902 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
CLDND1-220ENST00000508902 CCER1Q8TC90 406 aaPredicted RBP25.91■■□□□ 1.74
CLDND1-220ENST00000508902 PPIP5K1Q6PFW1 1433 aa25.89■■□□□ 1.74
CLDND1-220ENST00000508902 PLEKHG3A1L390 1219 aa25.88■■□□□ 1.73
CLDND1-220ENST00000508902 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
CLDND1-220ENST00000508902 SRPK2P78362 688 aaKnown RBP25.87■■□□□ 1.73
CLDND1-220ENST00000508902 PSME1Q06323 249 aa25.87■■□□□ 1.73
CLDND1-220ENST00000508902 ACEP12821 1306 aa25.87■■□□□ 1.73
CLDND1-220ENST00000508902 TIMELESSQ9UNS1 1208 aa25.86■■□□□ 1.73
CLDND1-220ENST00000508902 ADAMTS2O95450 1211 aa25.85■■□□□ 1.73
CLDND1-220ENST00000508902 MEX3CQ5U5Q3 659 aaKnown RBP25.85■■□□□ 1.73
CLDND1-220ENST00000508902 TESK2Q96S53 571 aa25.85■■□□□ 1.73
CLDND1-220ENST00000508902 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
CLDND1-220ENST00000508902 NGDNQ8NEJ9 315 aaKnown RBP25.84■■□□□ 1.73
CLDND1-220ENST00000508902 EVC2Q86UK5 1308 aa25.84■■□□□ 1.73
CLDND1-220ENST00000508902 CABLES1Q8TDN4 633 aa25.83■■□□□ 1.73
CLDND1-220ENST00000508902 AFF2P51816 1311 aa25.83■■□□□ 1.73
CLDND1-220ENST00000508902 C8orf37Q96NL8 207 aa25.82■■□□□ 1.72
CLDND1-220ENST00000508902 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
CLDND1-220ENST00000508902 NRKQ7Z2Y5 1582 aa25.81■■□□□ 1.72
CLDND1-220ENST00000508902 ARHGEF10O15013 1369 aa25.81■■□□□ 1.72
CLDND1-220ENST00000508902 USP47Q96K76 1375 aa25.81■■□□□ 1.72
CLDND1-220ENST00000508902 ST20-MTHFSA0A0A6YYL1 179 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms