RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
SNCA-211ENST00000508895 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
SNCA-211ENST00000508895 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
SNCA-211ENST00000508895 LRP6O75581 1613 aa12.73□□□□□ -0.37
SNCA-211ENST00000508895 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
SNCA-211ENST00000508895 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
SNCA-211ENST00000508895 LAMC1P11047 1609 aa12.7□□□□□ -0.38
SNCA-211ENST00000508895 NUTM2FA1L443 756 aa12.7□□□□□ -0.38
SNCA-211ENST00000508895 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
SNCA-211ENST00000508895 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
SNCA-211ENST00000508895 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
SNCA-211ENST00000508895 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
SNCA-211ENST00000508895 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
SNCA-211ENST00000508895 SAFB2Q14151 953 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNCA-211ENST00000508895 JCADQ9P266 1359 aa12.67□□□□□ -0.38
SNCA-211ENST00000508895 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
SNCA-211ENST00000508895 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
SNCA-211ENST00000508895 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
SNCA-211ENST00000508895 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
SNCA-211ENST00000508895 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
SNCA-211ENST00000508895 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
SNCA-211ENST00000508895 DLC1Q96QB1 1528 aa12.64□□□□□ -0.39
SNCA-211ENST00000508895 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SNCA-211ENST00000508895 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
SNCA-211ENST00000508895 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
SNCA-211ENST00000508895 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
SNCA-211ENST00000508895 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
SNCA-211ENST00000508895 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SNCA-211ENST00000508895 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-211ENST00000508895 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-211ENST00000508895 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
SNCA-211ENST00000508895 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-211ENST00000508895 HIRIP3Q9BW71 556 aaPredicted RBP12.62□□□□□ -0.39
SNCA-211ENST00000508895 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
SNCA-211ENST00000508895 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
SNCA-211ENST00000508895 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
SNCA-211ENST00000508895 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
SNCA-211ENST00000508895 FOXO3O43524 673 aa12.6□□□□□ -0.39
SNCA-211ENST00000508895 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
SNCA-211ENST00000508895 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
SNCA-211ENST00000508895 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.4
SNCA-211ENST00000508895 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SNCA-211ENST00000508895 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
SNCA-211ENST00000508895 POGKQ9P215 609 aa12.57□□□□□ -0.4
SNCA-211ENST00000508895 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
SNCA-211ENST00000508895 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
SNCA-211ENST00000508895 TRPM3Q9HCF6 1732 aaPredicted RBP12.55□□□□□ -0.4
SNCA-211ENST00000508895 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
SNCA-211ENST00000508895 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
SNCA-211ENST00000508895 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
SNCA-211ENST00000508895 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
SNCA-211ENST00000508895 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNCA-211ENST00000508895 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 ABCA3Q99758 1704 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 ATP7BP35670 1465 aa12.53□□□□□ -0.4
SNCA-211ENST00000508895 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
SNCA-211ENST00000508895 MARF1Q9Y4F3 1742 aaKnown RBP12.52□□□□□ -0.41
SNCA-211ENST00000508895 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
SNCA-211ENST00000508895 AFF2P51816 1311 aa12.52□□□□□ -0.41
SNCA-211ENST00000508895 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.41
SNCA-211ENST00000508895 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
SNCA-211ENST00000508895 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
SNCA-211ENST00000508895 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
SNCA-211ENST00000508895 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
SNCA-211ENST00000508895 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
SNCA-211ENST00000508895 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SNCA-211ENST00000508895 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
SNCA-211ENST00000508895 CRYBG1Q9Y4K1 1723 aa12.49□□□□□ -0.41
SNCA-211ENST00000508895 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
SNCA-211ENST00000508895 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
SNCA-211ENST00000508895 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
SNCA-211ENST00000508895 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
SNCA-211ENST00000508895 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
SNCA-211ENST00000508895 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.42
SNCA-211ENST00000508895 SBNO1A3KN83 1393 aa12.45□□□□□ -0.42
SNCA-211ENST00000508895 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
SNCA-211ENST00000508895 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
SNCA-211ENST00000508895 PSME1Q06323 249 aa12.45□□□□□ -0.42
SNCA-211ENST00000508895 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
SNCA-211ENST00000508895 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
SNCA-211ENST00000508895 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
SNCA-211ENST00000508895 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
SNCA-211ENST00000508895 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
SNCA-211ENST00000508895 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
SNCA-211ENST00000508895 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
SNCA-211ENST00000508895 RGS12O14924 1447 aa12.44□□□□□ -0.42
SNCA-211ENST00000508895 ACEP12821 1306 aa12.43□□□□□ -0.42
SNCA-211ENST00000508895 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
SNCA-211ENST00000508895 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
SNCA-211ENST00000508895 ATRNO75882 1429 aa12.43□□□□□ -0.42
SNCA-211ENST00000508895 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
SNCA-211ENST00000508895 SLIT2O94813 1529 aa12.42□□□□□ -0.42
SNCA-211ENST00000508895 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
SNCA-211ENST00000508895 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
SNCA-211ENST00000508895 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
SNCA-211ENST00000508895 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
SNCA-211ENST00000508895 RXRBP28702 533 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms