RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 DLC1Q96QB1 1528 aa34.18■■■■□ 3.06
CSNK1G3-204ENST00000508708 SIRT1Q96EB6 747 aa34.17■■■■□ 3.06
CSNK1G3-204ENST00000508708 KDM2AQ9Y2K7 1162 aa34.17■■■■□ 3.06
CSNK1G3-204ENST00000508708 SHPRHQ149N8 1683 aa34.12■■■■□ 3.05
CSNK1G3-204ENST00000508708 TRIM26Q12899 539 aaPredicted RBP34.1■■■■□ 3.05
CSNK1G3-204ENST00000508708 FMN2Q9NZ56 1722 aa34.09■■■■□ 3.05
CSNK1G3-204ENST00000508708 ORAI2Q96SN7 254 aa34.07■■■■□ 3.04
CSNK1G3-204ENST00000508708 DDX17Q92841 729 aaKnown RBP34.06■■■■□ 3.04
CSNK1G3-204ENST00000508708 KIAA1210Q9ULL0 1709 aa34.05■■■■□ 3.04
CSNK1G3-204ENST00000508708 PRAM1Q96QH2 718 aa34.04■■■■□ 3.04
CSNK1G3-204ENST00000508708 LRP6O75581 1613 aa34.04■■■■□ 3.04
CSNK1G3-204ENST00000508708 ADGRB2O60241 1585 aa34.03■■■■□ 3.04
CSNK1G3-204ENST00000508708 PHF23Q9BUL5 403 aaPredicted RBP34.02■■■■□ 3.04
CSNK1G3-204ENST00000508708 SPATA31A6Q5VVP1 1343 aa34.01■■■■□ 3.03
CSNK1G3-204ENST00000508708 ARHGEF28Q8N1W1 1705 aaKnown RBP33.99■■■■□ 3.03
CSNK1G3-204ENST00000508708 SIN3AQ96ST3 1273 aa33.99■■■■□ 3.03
CSNK1G3-204ENST00000508708 RGS17Q9UGC6 210 aaPredicted RBP33.99■■■■□ 3.03
CSNK1G3-204ENST00000508708 TRAK1Q9UPV9 953 aa33.99■■■■□ 3.03
CSNK1G3-204ENST00000508708 SOS2Q07890 1332 aaPredicted RBP33.98■■■■□ 3.03
CSNK1G3-204ENST00000508708 SAFB2Q14151 953 aaKnown RBP eCLIP33.96■■■■□ 3.03
CSNK1G3-204ENST00000508708 ESCO1Q5FWF5 840 aa33.94■■■■□ 3.02
CSNK1G3-204ENST00000508708 L3MBTL2Q969R5 705 aa33.94■■■■□ 3.02
CSNK1G3-204ENST00000508708 LRRC59Q96AG4 307 aaKnown RBP33.94■■■■□ 3.02
CSNK1G3-204ENST00000508708 PNPLA6Q8IY17 1366 aa33.94■■■■□ 3.02
CSNK1G3-204ENST00000508708 PXDNQ92626 1479 aa33.94■■■■□ 3.02
CSNK1G3-204ENST00000508708 NUTM2FA1L443 756 aa33.93■■■■□ 3.02
CSNK1G3-204ENST00000508708 POGKQ9P215 609 aa33.93■■■■□ 3.02
CSNK1G3-204ENST00000508708 KIF1AQ12756 1690 aa33.92■■■■□ 3.02
CSNK1G3-204ENST00000508708 USP32Q8NFA0 1604 aa33.9■■■■□ 3.02
CSNK1G3-204ENST00000508708 NPHP3Q7Z494 1330 aa33.89■■■■□ 3.02
CSNK1G3-204ENST00000508708 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
CSNK1G3-204ENST00000508708 NBPF1Q3BBV0 1214 aa33.87■■■■□ 3.01
CSNK1G3-204ENST00000508708 ANKARQ7Z5J8 1434 aa33.87■■■■□ 3.01
CSNK1G3-204ENST00000508708 NEUROD1Q13562 356 aa33.85■■■■□ 3.01
CSNK1G3-204ENST00000508708 COL22A1Q8NFW1 1626 aaPredicted RBP33.83■■■■□ 3.01
CSNK1G3-204ENST00000508708 FOXO3O43524 673 aa33.83■■■■□ 3.01
CSNK1G3-204ENST00000508708 TRPM1Q7Z4N2 1603 aa33.82■■■■□ 3.01
CSNK1G3-204ENST00000508708 MINK1Q8N4C8 1332 aaPredicted RBP33.82■■■■□ 3.01
CSNK1G3-204ENST00000508708 HIRIP3Q9BW71 556 aaPredicted RBP33.82■■■■□ 3
CSNK1G3-204ENST00000508708 TULP4Q9NRJ4 1543 aa33.82■■■■□ 3
CSNK1G3-204ENST00000508708 SOCS7O14512 581 aa33.8■■■■□ 3
CSNK1G3-204ENST00000508708 POTEAQ6S8J7 498 aa33.78■■■■□ 3
CSNK1G3-204ENST00000508708 EIF3AQ14152 1382 aaKnown RBP33.77■■■■□ 3
CSNK1G3-204ENST00000508708 NUTM2BA6NNL0 878 aaPredicted RBP33.77■■■■□ 3
CSNK1G3-204ENST00000508708 NUTM2EB1AL46 878 aaPredicted RBP33.77■■■■□ 3
CSNK1G3-204ENST00000508708 XPCQ01831 940 aaPredicted RBP33.77■■■■□ 3
CSNK1G3-204ENST00000508708 NUTM2AQ8IVF1 878 aaPredicted RBP33.77■■■■□ 3
CSNK1G3-204ENST00000508708 PHF8Q9UPP1 1060 aa33.77■■■■□ 3
CSNK1G3-204ENST00000508708 PRR36Q9H6K5 1346 aa33.77■■■■□ 3
CSNK1G3-204ENST00000508708 WASLO00401 505 aaPredicted RBP33.76■■■□□ 2.99
CSNK1G3-204ENST00000508708 MEX3CQ5U5Q3 659 aaKnown RBP33.75■■■□□ 2.99
CSNK1G3-204ENST00000508708 ATP7BP35670 1465 aa33.73■■■□□ 2.99
CSNK1G3-204ENST00000508708 SPATA31A3Q5VYP0 1347 aa33.69■■■□□ 2.98
CSNK1G3-204ENST00000508708 KRT28Q7Z3Y7 464 aa33.67■■■□□ 2.98
CSNK1G3-204ENST00000508708 NBPF8Q3BBV2 869 aa33.66■■■□□ 2.98
CSNK1G3-204ENST00000508708 TNS3Q68CZ2 1445 aa33.66■■■□□ 2.98
CSNK1G3-204ENST00000508708 ITSN1Q15811 1721 aa33.65■■■□□ 2.98
CSNK1G3-204ENST00000508708 TOPAZ1Q8N9V7 1692 aa33.65■■■□□ 2.98
CSNK1G3-204ENST00000508708 QRICH2Q9H0J4 1663 aa33.65■■■□□ 2.98
CSNK1G3-204ENST00000508708 PMFBP1Q8TBY8 1022 aa33.65■■■□□ 2.98
CSNK1G3-204ENST00000508708 SBNO1A3KN83 1393 aa33.64■■■□□ 2.98
CSNK1G3-204ENST00000508708 ROCK2O75116 1388 aaKnown RBP33.64■■■□□ 2.98
CSNK1G3-204ENST00000508708 GPRASP1Q5JY77 1395 aa33.64■■■□□ 2.98
CSNK1G3-204ENST00000508708 CENPJQ9HC77 1338 aaPredicted RBP33.64■■■□□ 2.98
CSNK1G3-204ENST00000508708 TRPM3Q9HCF6 1732 aaPredicted RBP33.64■■■□□ 2.98
CSNK1G3-204ENST00000508708 TONSLQ96HA7 1378 aa33.63■■■□□ 2.97
CSNK1G3-204ENST00000508708 ZNF772Q68DY9 489 aaPredicted RBP33.63■■■□□ 2.97
CSNK1G3-204ENST00000508708 AFF2P51816 1311 aa33.62■■■□□ 2.97
CSNK1G3-204ENST00000508708 ADAMTS2O95450 1211 aa33.6■■■□□ 2.97
CSNK1G3-204ENST00000508708 C8orf37Q96NL8 207 aa33.6■■■□□ 2.97
CSNK1G3-204ENST00000508708 CDK19Q9BWU1 502 aa33.6■■■□□ 2.97
CSNK1G3-204ENST00000508708 NUDT16Q96DE0 195 aaKnown RBP33.59■■■□□ 2.97
CSNK1G3-204ENST00000508708 RALGAPBQ86X10 1494 aa33.58■■■□□ 2.97
CSNK1G3-204ENST00000508708 PSME1Q06323 249 aa33.58■■■□□ 2.97
CSNK1G3-204ENST00000508708 MARF1Q9Y4F3 1742 aaKnown RBP33.57■■■□□ 2.96
CSNK1G3-204ENST00000508708 ALS2Q96Q42 1657 aa33.55■■■□□ 2.96
CSNK1G3-204ENST00000508708 ABCA3Q99758 1704 aa33.55■■■□□ 2.96
CSNK1G3-204ENST00000508708 ARHGEF10O15013 1369 aa33.53■■■□□ 2.96
CSNK1G3-204ENST00000508708 POLR3AO14802 1390 aaPredicted RBP33.5■■■□□ 2.95
CSNK1G3-204ENST00000508708 FNBP4Q8N3X1 1017 aaPredicted RBP33.49■■■□□ 2.95
CSNK1G3-204ENST00000508708 NGLY1Q96IV0 654 aa33.49■■■□□ 2.95
CSNK1G3-204ENST00000508708 CCDC61Q9Y6R9 512 aa33.49■■■□□ 2.95
CSNK1G3-204ENST00000508708 NGDNQ8NEJ9 315 aaKnown RBP33.48■■■□□ 2.95
CSNK1G3-204ENST00000508708 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
CSNK1G3-204ENST00000508708 PLEKHG3A1L390 1219 aa33.45■■■□□ 2.95
CSNK1G3-204ENST00000508708 CDK12Q9NYV4 1490 aaPredicted RBP33.44■■■□□ 2.94
CSNK1G3-204ENST00000508708 CABP2Q9NPB3 220 aa33.44■■■□□ 2.94
CSNK1G3-204ENST00000508708 CRYBG1Q9Y4K1 1723 aa33.44■■■□□ 2.94
CSNK1G3-204ENST00000508708 SRPK2P78362 688 aaKnown RBP33.43■■■□□ 2.94
CSNK1G3-204ENST00000508708 CABLES1Q8TDN4 633 aa33.43■■■□□ 2.94
CSNK1G3-204ENST00000508708 PPIP5K1Q6PFW1 1433 aa33.43■■■□□ 2.94
CSNK1G3-204ENST00000508708 BCL9LQ86UU0 1499 aa33.43■■■□□ 2.94
CSNK1G3-204ENST00000508708 SBNO2Q9Y2G9 1366 aa33.42■■■□□ 2.94
CSNK1G3-204ENST00000508708 RXRBP28702 533 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 LMOD2Q6P5Q4 547 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 CARD11Q9BXL7 1154 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 USP21Q9UK80 565 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 ACEP12821 1306 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 SLIT2O94813 1529 aa33.41■■■□□ 2.94
CSNK1G3-204ENST00000508708 ATRNO75882 1429 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms