RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
NR1I3-225ENST00000508387 SPATA31A6Q5VVP1 1343 aa18.91■□□□□ 0.62
NR1I3-225ENST00000508387 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
NR1I3-225ENST00000508387 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
NR1I3-225ENST00000508387 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
NR1I3-225ENST00000508387 NUTM2FA1L443 756 aa18.89■□□□□ 0.61
NR1I3-225ENST00000508387 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
NR1I3-225ENST00000508387 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
NR1I3-225ENST00000508387 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.61
NR1I3-225ENST00000508387 PNPLA6Q8IY17 1366 aa18.89■□□□□ 0.61
NR1I3-225ENST00000508387 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
NR1I3-225ENST00000508387 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
NR1I3-225ENST00000508387 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
NR1I3-225ENST00000508387 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
NR1I3-225ENST00000508387 HRCP23327 699 aa18.85■□□□□ 0.61
NR1I3-225ENST00000508387 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
NR1I3-225ENST00000508387 PXDNQ92626 1479 aa18.84■□□□□ 0.61
NR1I3-225ENST00000508387 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.61
NR1I3-225ENST00000508387 SAFB2Q14151 953 aaKnown RBP eCLIP18.83■□□□□ 0.6
NR1I3-225ENST00000508387 ESCO1Q5FWF5 840 aa18.83■□□□□ 0.6
NR1I3-225ENST00000508387 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.6
NR1I3-225ENST00000508387 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
NR1I3-225ENST00000508387 DCAF11Q8TEB1 546 aa18.82■□□□□ 0.6
NR1I3-225ENST00000508387 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
NR1I3-225ENST00000508387 PRAM1Q96QH2 718 aa18.81■□□□□ 0.6
NR1I3-225ENST00000508387 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
NR1I3-225ENST00000508387 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
NR1I3-225ENST00000508387 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
NR1I3-225ENST00000508387 AFF2P51816 1311 aa18.78■□□□□ 0.6
NR1I3-225ENST00000508387 ARHGEF28Q8N1W1 1705 aaKnown RBP18.78■□□□□ 0.6
NR1I3-225ENST00000508387 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
NR1I3-225ENST00000508387 FOXO3O43524 673 aa18.77■□□□□ 0.6
NR1I3-225ENST00000508387 C8orf37Q96NL8 207 aa18.77■□□□□ 0.6
NR1I3-225ENST00000508387 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
NR1I3-225ENST00000508387 ADAMTS2O95450 1211 aa18.76■□□□□ 0.59
NR1I3-225ENST00000508387 SIRT1Q96EB6 747 aa18.76■□□□□ 0.59
NR1I3-225ENST00000508387 NPHP3Q7Z494 1330 aa18.75■□□□□ 0.59
NR1I3-225ENST00000508387 HIRIP3Q9BW71 556 aaPredicted RBP18.74■□□□□ 0.59
NR1I3-225ENST00000508387 ZNF772Q68DY9 489 aaPredicted RBP18.73■□□□□ 0.59
NR1I3-225ENST00000508387 MARF1Q9Y4F3 1742 aaKnown RBP18.72■□□□□ 0.59
NR1I3-225ENST00000508387 POGKQ9P215 609 aa18.72■□□□□ 0.59
NR1I3-225ENST00000508387 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
NR1I3-225ENST00000508387 PRR36Q9H6K5 1346 aa18.7■□□□□ 0.58
NR1I3-225ENST00000508387 KIAA1210Q9ULL0 1709 aa18.69■□□□□ 0.58
NR1I3-225ENST00000508387 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
NR1I3-225ENST00000508387 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
NR1I3-225ENST00000508387 ABCA3Q99758 1704 aa18.69■□□□□ 0.58
NR1I3-225ENST00000508387 RGS12O14924 1447 aa18.67■□□□□ 0.58
NR1I3-225ENST00000508387 TRPM3Q9HCF6 1732 aaPredicted RBP18.67■□□□□ 0.58
NR1I3-225ENST00000508387 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
NR1I3-225ENST00000508387 SPATA31A3Q5VYP0 1347 aa18.67■□□□□ 0.58
NR1I3-225ENST00000508387 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
NR1I3-225ENST00000508387 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
NR1I3-225ENST00000508387 NGLY1Q96IV0 654 aa18.66■□□□□ 0.58
NR1I3-225ENST00000508387 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
NR1I3-225ENST00000508387 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
NR1I3-225ENST00000508387 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
NR1I3-225ENST00000508387 RXRBP28702 533 aa18.65■□□□□ 0.58
NR1I3-225ENST00000508387 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
NR1I3-225ENST00000508387 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
NR1I3-225ENST00000508387 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
NR1I3-225ENST00000508387 ATP7BP35670 1465 aa18.63■□□□□ 0.57
NR1I3-225ENST00000508387 CDK12Q9NYV4 1490 aaPredicted RBP18.63■□□□□ 0.57
NR1I3-225ENST00000508387 WASLO00401 505 aaPredicted RBP18.62■□□□□ 0.57
NR1I3-225ENST00000508387 USP21Q9UK80 565 aa18.62■□□□□ 0.57
NR1I3-225ENST00000508387 TOPAZ1Q8N9V7 1692 aa18.62■□□□□ 0.57
NR1I3-225ENST00000508387 ALS2Q96Q42 1657 aa18.62■□□□□ 0.57
NR1I3-225ENST00000508387 ITSN1Q15811 1721 aa18.61■□□□□ 0.57
NR1I3-225ENST00000508387 BCL9LQ86UU0 1499 aa18.61■□□□□ 0.57
NR1I3-225ENST00000508387 CABLES1Q8TDN4 633 aa18.61■□□□□ 0.57
NR1I3-225ENST00000508387 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
NR1I3-225ENST00000508387 ATRNO75882 1429 aa18.6■□□□□ 0.57
NR1I3-225ENST00000508387 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
NR1I3-225ENST00000508387 PLCH1Q4KWH8 1693 aa18.6■□□□□ 0.57
NR1I3-225ENST00000508387 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
NR1I3-225ENST00000508387 FNBP4Q8N3X1 1017 aaPredicted RBP18.59■□□□□ 0.57
NR1I3-225ENST00000508387 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
NR1I3-225ENST00000508387 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.58■□□□□ 0.57
NR1I3-225ENST00000508387 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
NR1I3-225ENST00000508387 RBM6P78332 1123 aaKnown RBP18.58■□□□□ 0.56
NR1I3-225ENST00000508387 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
NR1I3-225ENST00000508387 LMOD2Q6P5Q4 547 aa18.58■□□□□ 0.56
NR1I3-225ENST00000508387 PSME1Q06323 249 aa18.57■□□□□ 0.56
NR1I3-225ENST00000508387 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
NR1I3-225ENST00000508387 SLIT2O94813 1529 aa18.56■□□□□ 0.56
NR1I3-225ENST00000508387 GLI3P10071 1580 aa18.55■□□□□ 0.56
NR1I3-225ENST00000508387 UPF1Q92900 1129 aaKnown RBP eCLIP18.55■□□□□ 0.56
NR1I3-225ENST00000508387 NUDT16Q96DE0 195 aaKnown RBP18.54■□□□□ 0.56
NR1I3-225ENST00000508387 CDK19Q9BWU1 502 aa18.54■□□□□ 0.56
NR1I3-225ENST00000508387 TRPC5Q9UL62 973 aaPredicted RBP18.54■□□□□ 0.56
NR1I3-225ENST00000508387 ARHGEF10O15013 1369 aa18.53■□□□□ 0.56
NR1I3-225ENST00000508387 NRAPQ86VF7 1730 aa18.52■□□□□ 0.56
NR1I3-225ENST00000508387 HAP1P54257 671 aaPredicted RBP18.51■□□□□ 0.55
NR1I3-225ENST00000508387 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
NR1I3-225ENST00000508387 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
NR1I3-225ENST00000508387 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
NR1I3-225ENST00000508387 NWD2Q9ULI1 1742 aa18.5■□□□□ 0.55
NR1I3-225ENST00000508387 RALGAPBQ86X10 1494 aa18.5■□□□□ 0.55
NR1I3-225ENST00000508387 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
NR1I3-225ENST00000508387 NBPF8Q3BBV2 869 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms