RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 ADGRB2O60241 1585 aa17.89■□□□□ 0.45
PTPN20-218ENST00000508357 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
PTPN20-218ENST00000508357 SLAIN2Q9P270 581 aa17.88■□□□□ 0.45
PTPN20-218ENST00000508357 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
PTPN20-218ENST00000508357 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
PTPN20-218ENST00000508357 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
PTPN20-218ENST00000508357 C1orf167Q5SNV9 1468 aa17.87■□□□□ 0.45
PTPN20-218ENST00000508357 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
PTPN20-218ENST00000508357 MSH5O43196 834 aa17.86■□□□□ 0.45
PTPN20-218ENST00000508357 ATF3P18847 181 aa17.86■□□□□ 0.45
PTPN20-218ENST00000508357 NHSL1Q5SYE7 1610 aa17.86■□□□□ 0.45
PTPN20-218ENST00000508357 PHLPP1O60346 1717 aa17.85■□□□□ 0.45
PTPN20-218ENST00000508357 SIRT1Q96EB6 747 aa17.85■□□□□ 0.45
PTPN20-218ENST00000508357 PRAM1Q96QH2 718 aa17.85■□□□□ 0.45
PTPN20-218ENST00000508357 TONSLQ96HA7 1378 aa17.84■□□□□ 0.45
PTPN20-218ENST00000508357 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
PTPN20-218ENST00000508357 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
PTPN20-218ENST00000508357 BRINP3Q76B58 766 aa17.83■□□□□ 0.44
PTPN20-218ENST00000508357 USP32Q8NFA0 1604 aa17.83■□□□□ 0.44
PTPN20-218ENST00000508357 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
PTPN20-218ENST00000508357 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPN20-218ENST00000508357 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
PTPN20-218ENST00000508357 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
PTPN20-218ENST00000508357 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
PTPN20-218ENST00000508357 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
PTPN20-218ENST00000508357 ORAI2Q96SN7 254 aa17.77■□□□□ 0.44
PTPN20-218ENST00000508357 MED1Q15648 1581 aaPredicted RBP17.77■□□□□ 0.44
PTPN20-218ENST00000508357 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
PTPN20-218ENST00000508357 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
PTPN20-218ENST00000508357 POGKQ9P215 609 aa17.76■□□□□ 0.43
PTPN20-218ENST00000508357 TULP4Q9NRJ4 1543 aa17.76■□□□□ 0.43
PTPN20-218ENST00000508357 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
PTPN20-218ENST00000508357 KIF1AQ12756 1690 aa17.75■□□□□ 0.43
PTPN20-218ENST00000508357 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
PTPN20-218ENST00000508357 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
PTPN20-218ENST00000508357 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
PTPN20-218ENST00000508357 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
PTPN20-218ENST00000508357 ATP7BP35670 1465 aa17.73■□□□□ 0.43
PTPN20-218ENST00000508357 PXDNQ92626 1479 aa17.73■□□□□ 0.43
PTPN20-218ENST00000508357 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
PTPN20-218ENST00000508357 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
PTPN20-218ENST00000508357 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
PTPN20-218ENST00000508357 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
PTPN20-218ENST00000508357 LRP6O75581 1613 aa17.69■□□□□ 0.42
PTPN20-218ENST00000508357 JCADQ9P266 1359 aa17.68■□□□□ 0.42
PTPN20-218ENST00000508357 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
PTPN20-218ENST00000508357 ESCO1Q5FWF5 840 aa17.68■□□□□ 0.42
PTPN20-218ENST00000508357 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
PTPN20-218ENST00000508357 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
PTPN20-218ENST00000508357 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
PTPN20-218ENST00000508357 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
PTPN20-218ENST00000508357 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
PTPN20-218ENST00000508357 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
PTPN20-218ENST00000508357 TRPM3Q9HCF6 1732 aaPredicted RBP17.64■□□□□ 0.41
PTPN20-218ENST00000508357 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
PTPN20-218ENST00000508357 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
PTPN20-218ENST00000508357 NPHP3Q7Z494 1330 aa17.63■□□□□ 0.41
PTPN20-218ENST00000508357 FOXO3O43524 673 aa17.62■□□□□ 0.41
PTPN20-218ENST00000508357 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
PTPN20-218ENST00000508357 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
PTPN20-218ENST00000508357 SBNO2Q9Y2G9 1366 aa17.62■□□□□ 0.41
PTPN20-218ENST00000508357 ALS2Q96Q42 1657 aa17.59■□□□□ 0.41
PTPN20-218ENST00000508357 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
PTPN20-218ENST00000508357 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
PTPN20-218ENST00000508357 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
PTPN20-218ENST00000508357 DISP3Q9P2K9 1392 aa17.58■□□□□ 0.4
PTPN20-218ENST00000508357 TNS3Q68CZ2 1445 aa17.57■□□□□ 0.4
PTPN20-218ENST00000508357 USP47Q96K76 1375 aa17.57■□□□□ 0.4
PTPN20-218ENST00000508357 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
PTPN20-218ENST00000508357 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
PTPN20-218ENST00000508357 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
PTPN20-218ENST00000508357 POLR3AO14802 1390 aaPredicted RBP17.56■□□□□ 0.4
PTPN20-218ENST00000508357 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
PTPN20-218ENST00000508357 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
PTPN20-218ENST00000508357 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
PTPN20-218ENST00000508357 TESK2Q96S53 571 aa17.55■□□□□ 0.4
PTPN20-218ENST00000508357 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
PTPN20-218ENST00000508357 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
PTPN20-218ENST00000508357 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
PTPN20-218ENST00000508357 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
PTPN20-218ENST00000508357 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
PTPN20-218ENST00000508357 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
PTPN20-218ENST00000508357 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-218ENST00000508357 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
PTPN20-218ENST00000508357 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.39
PTPN20-218ENST00000508357 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
PTPN20-218ENST00000508357 ACEP12821 1306 aa17.5■□□□□ 0.39
PTPN20-218ENST00000508357 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
PTPN20-218ENST00000508357 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
PTPN20-218ENST00000508357 NUTM2BA6NNL0 878 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-218ENST00000508357 NUTM2EB1AL46 878 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-218ENST00000508357 NUTM2AQ8IVF1 878 aaPredicted RBP17.49■□□□□ 0.39
PTPN20-218ENST00000508357 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
PTPN20-218ENST00000508357 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
PTPN20-218ENST00000508357 MON2Q7Z3U7 1717 aa17.48■□□□□ 0.39
PTPN20-218ENST00000508357 PSME1Q06323 249 aa17.48■□□□□ 0.39
PTPN20-218ENST00000508357 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
PTPN20-218ENST00000508357 USP6P35125 1406 aa17.47■□□□□ 0.39
PTPN20-218ENST00000508357 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
PTPN20-218ENST00000508357 CABP1Q9NZU7 370 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms