RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 WAPLQ7Z5K2 1190 aa28.77■■■□□ 2.2
SFXN1-209ENST00000508290 NHSL1Q5SYE7 1610 aa28.73■■■□□ 2.19
SFXN1-209ENST00000508290 PLEKHH1Q9ULM0 1364 aa28.73■■■□□ 2.19
SFXN1-209ENST00000508290 KIAA1210Q9ULL0 1709 aa28.72■■■□□ 2.19
SFXN1-209ENST00000508290 SPATA31A6Q5VVP1 1343 aa28.71■■■□□ 2.19
SFXN1-209ENST00000508290 PRAM1Q96QH2 718 aa28.71■■■□□ 2.19
SFXN1-209ENST00000508290 PHF23Q9BUL5 403 aaPredicted RBP28.71■■■□□ 2.19
SFXN1-209ENST00000508290 POGKQ9P215 609 aa28.71■■■□□ 2.19
SFXN1-209ENST00000508290 LRRC59Q96AG4 307 aaKnown RBP28.69■■■□□ 2.18
SFXN1-209ENST00000508290 TRAK1Q9UPV9 953 aa28.66■■■□□ 2.18
SFXN1-209ENST00000508290 SHPRHQ149N8 1683 aa28.66■■■□□ 2.18
SFXN1-209ENST00000508290 ORAI2Q96SN7 254 aa28.65■■■□□ 2.18
SFXN1-209ENST00000508290 ADGRB2O60241 1585 aa28.65■■■□□ 2.18
SFXN1-209ENST00000508290 EIF3AQ14152 1382 aaKnown RBP28.64■■■□□ 2.18
SFXN1-209ENST00000508290 FMN2Q9NZ56 1722 aa28.64■■■□□ 2.18
SFXN1-209ENST00000508290 ESCO1Q5FWF5 840 aa28.64■■■□□ 2.18
SFXN1-209ENST00000508290 NPHP3Q7Z494 1330 aa28.64■■■□□ 2.17
SFXN1-209ENST00000508290 L3MBTL2Q969R5 705 aa28.63■■■□□ 2.17
SFXN1-209ENST00000508290 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
SFXN1-209ENST00000508290 SOS2Q07890 1332 aaPredicted RBP28.62■■■□□ 2.17
SFXN1-209ENST00000508290 ANKARQ7Z5J8 1434 aa28.6■■■□□ 2.17
SFXN1-209ENST00000508290 NEUROD1Q13562 356 aa28.59■■■□□ 2.17
SFXN1-209ENST00000508290 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
SFXN1-209ENST00000508290 KIF1AQ12756 1690 aa28.58■■■□□ 2.16
SFXN1-209ENST00000508290 ARHGEF28Q8N1W1 1705 aaKnown RBP28.55■■■□□ 2.16
SFXN1-209ENST00000508290 PNPLA6Q8IY17 1366 aa28.54■■■□□ 2.16
SFXN1-209ENST00000508290 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
SFXN1-209ENST00000508290 NUTM2FA1L443 756 aa28.53■■■□□ 2.16
SFXN1-209ENST00000508290 ILDR2Q71H61 639 aa28.53■■■□□ 2.16
SFXN1-209ENST00000508290 MINK1Q8N4C8 1332 aaPredicted RBP28.51■■■□□ 2.15
SFXN1-209ENST00000508290 FOXO3O43524 673 aa28.51■■■□□ 2.15
SFXN1-209ENST00000508290 PXDNQ92626 1479 aa28.51■■■□□ 2.15
SFXN1-209ENST00000508290 TONSLQ96HA7 1378 aa28.5■■■□□ 2.15
SFXN1-209ENST00000508290 WASLO00401 505 aaPredicted RBP28.5■■■□□ 2.15
SFXN1-209ENST00000508290 NBPF1Q3BBV0 1214 aa28.5■■■□□ 2.15
SFXN1-209ENST00000508290 MEX3CQ5U5Q3 659 aaKnown RBP28.5■■■□□ 2.15
SFXN1-209ENST00000508290 PHF8Q9UPP1 1060 aa28.5■■■□□ 2.15
SFXN1-209ENST00000508290 TULP4Q9NRJ4 1543 aa28.49■■■□□ 2.15
SFXN1-209ENST00000508290 LRP6O75581 1613 aa28.49■■■□□ 2.15
SFXN1-209ENST00000508290 HIRIP3Q9BW71 556 aaPredicted RBP28.46■■■□□ 2.15
SFXN1-209ENST00000508290 TRPM1Q7Z4N2 1603 aa28.46■■■□□ 2.15
SFXN1-209ENST00000508290 PSME1Q06323 249 aa28.45■■■□□ 2.14
SFXN1-209ENST00000508290 RGS17Q9UGC6 210 aaPredicted RBP28.44■■■□□ 2.14
SFXN1-209ENST00000508290 ROCK2O75116 1388 aaKnown RBP28.44■■■□□ 2.14
SFXN1-209ENST00000508290 CENPJQ9HC77 1338 aaPredicted RBP28.43■■■□□ 2.14
SFXN1-209ENST00000508290 COL22A1Q8NFW1 1626 aaPredicted RBP28.43■■■□□ 2.14
SFXN1-209ENST00000508290 NUTM2BA6NNL0 878 aaPredicted RBP28.42■■■□□ 2.14
SFXN1-209ENST00000508290 NUTM2EB1AL46 878 aaPredicted RBP28.42■■■□□ 2.14
SFXN1-209ENST00000508290 ZNF772Q68DY9 489 aaPredicted RBP28.42■■■□□ 2.14
SFXN1-209ENST00000508290 NUTM2AQ8IVF1 878 aaPredicted RBP28.42■■■□□ 2.14
SFXN1-209ENST00000508290 USP32Q8NFA0 1604 aa28.42■■■□□ 2.14
SFXN1-209ENST00000508290 SOCS7O14512 581 aa28.41■■■□□ 2.14
SFXN1-209ENST00000508290 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
SFXN1-209ENST00000508290 KRT28Q7Z3Y7 464 aa28.4■■■□□ 2.14
SFXN1-209ENST00000508290 SBNO1A3KN83 1393 aa28.39■■■□□ 2.14
SFXN1-209ENST00000508290 GPRASP1Q5JY77 1395 aa28.39■■■□□ 2.14
SFXN1-209ENST00000508290 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.13
SFXN1-209ENST00000508290 ATP7BP35670 1465 aa28.37■■■□□ 2.13
SFXN1-209ENST00000508290 PRR36Q9H6K5 1346 aa28.37■■■□□ 2.13
SFXN1-209ENST00000508290 XPCQ01831 940 aaPredicted RBP28.36■■■□□ 2.13
SFXN1-209ENST00000508290 RGPD8O14715 1765 aaPredicted RBP28.36■■■□□ 2.13
SFXN1-209ENST00000508290 TNS3Q68CZ2 1445 aa28.35■■■□□ 2.13
SFXN1-209ENST00000508290 ITSN1Q15811 1721 aa28.35■■■□□ 2.13
SFXN1-209ENST00000508290 NUDT16Q96DE0 195 aaKnown RBP28.35■■■□□ 2.13
SFXN1-209ENST00000508290 CDK19Q9BWU1 502 aa28.35■■■□□ 2.13
SFXN1-209ENST00000508290 ARHGEF10O15013 1369 aa28.35■■■□□ 2.13
SFXN1-209ENST00000508290 PMFBP1Q8TBY8 1022 aa28.33■■■□□ 2.13
SFXN1-209ENST00000508290 RALGAPBQ86X10 1494 aa28.33■■■□□ 2.13
SFXN1-209ENST00000508290 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
SFXN1-209ENST00000508290 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
SFXN1-209ENST00000508290 CCDC61Q9Y6R9 512 aa28.32■■■□□ 2.12
SFXN1-209ENST00000508290 POTEAQ6S8J7 498 aa28.31■■■□□ 2.12
SFXN1-209ENST00000508290 NGDNQ8NEJ9 315 aaKnown RBP28.31■■■□□ 2.12
SFXN1-209ENST00000508290 TIMELESSQ9UNS1 1208 aa28.31■■■□□ 2.12
SFXN1-209ENST00000508290 QRICH2Q9H0J4 1663 aa28.3■■■□□ 2.12
SFXN1-209ENST00000508290 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
SFXN1-209ENST00000508290 AFF2P51816 1311 aa28.28■■■□□ 2.12
SFXN1-209ENST00000508290 EVC2Q86UK5 1308 aa28.27■■■□□ 2.12
SFXN1-209ENST00000508290 ADAMTS2O95450 1211 aa28.27■■■□□ 2.12
SFXN1-209ENST00000508290 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
SFXN1-209ENST00000508290 NGLY1Q96IV0 654 aa28.27■■■□□ 2.12
SFXN1-209ENST00000508290 CARD11Q9BXL7 1154 aa28.27■■■□□ 2.12
SFXN1-209ENST00000508290 PLEKHG3A1L390 1219 aa28.26■■■□□ 2.11
SFXN1-209ENST00000508290 POLR3AO14802 1390 aaPredicted RBP28.25■■■□□ 2.11
SFXN1-209ENST00000508290 SBNO2Q9Y2G9 1366 aa28.25■■■□□ 2.11
SFXN1-209ENST00000508290 TOPAZ1Q8N9V7 1692 aa28.25■■■□□ 2.11
SFXN1-209ENST00000508290 FNBP4Q8N3X1 1017 aaPredicted RBP28.22■■■□□ 2.11
SFXN1-209ENST00000508290 TRPM3Q9HCF6 1732 aaPredicted RBP28.21■■■□□ 2.11
SFXN1-209ENST00000508290 HAP1P54257 671 aaPredicted RBP28.2■■■□□ 2.1
SFXN1-209ENST00000508290 LMOD2Q6P5Q4 547 aa28.2■■■□□ 2.1
SFXN1-209ENST00000508290 BRD4O60885 1362 aaPredicted RBP28.2■■■□□ 2.1
SFXN1-209ENST00000508290 SLC24A1O60721 1099 aa28.19■■■□□ 2.1
SFXN1-209ENST00000508290 ACEP12821 1306 aa28.18■■■□□ 2.1
SFXN1-209ENST00000508290 PPIP5K1Q6PFW1 1433 aa28.18■■■□□ 2.1
SFXN1-209ENST00000508290 RXRBP28702 533 aa28.18■■■□□ 2.1
SFXN1-209ENST00000508290 CDK12Q9NYV4 1490 aaPredicted RBP28.18■■■□□ 2.1
SFXN1-209ENST00000508290 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
SFXN1-209ENST00000508290 ALS2Q96Q42 1657 aa28.16■■■□□ 2.1
SFXN1-209ENST00000508290 MARF1Q9Y4F3 1742 aaKnown RBP28.16■■■□□ 2.1
SFXN1-209ENST00000508290 USP21Q9UK80 565 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms