RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 IQGAP3Q86VI3 1631 aa14.22□□□□□ -0.13
CAST-220ENST00000508117 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
CAST-220ENST00000508117 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
CAST-220ENST00000508117 CCDC125Q86Z20 511 aa14.18□□□□□ -0.14
CAST-220ENST00000508117 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
CAST-220ENST00000508117 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
CAST-220ENST00000508117 FNBP4Q8N3X1 1017 aaPredicted RBP14.17□□□□□ -0.14
CAST-220ENST00000508117 TRPC5Q9UL62 973 aaPredicted RBP14.17□□□□□ -0.14
CAST-220ENST00000508117 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
CAST-220ENST00000508117 METP08581 1390 aa14.17□□□□□ -0.14
CAST-220ENST00000508117 ROCK1Q13464 1354 aa14.17□□□□□ -0.14
CAST-220ENST00000508117 SOS2Q07890 1332 aaPredicted RBP14.16□□□□□ -0.14
CAST-220ENST00000508117 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
CAST-220ENST00000508117 C1orf167Q5SNV9 1468 aa14.16□□□□□ -0.14
CAST-220ENST00000508117 ATRNO75882 1429 aa14.15□□□□□ -0.14
CAST-220ENST00000508117 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
CAST-220ENST00000508117 USP21Q9UK80 565 aa14.15□□□□□ -0.14
CAST-220ENST00000508117 COL22A1Q8NFW1 1626 aaPredicted RBP14.15□□□□□ -0.14
CAST-220ENST00000508117 ADAMTS2O95450 1211 aa14.14□□□□□ -0.15
CAST-220ENST00000508117 EP400Q96L91 3159 aa14.14□□□□□ -0.15
CAST-220ENST00000508117 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
CAST-220ENST00000508117 NUP155O75694 1391 aa14.12□□□□□ -0.15
CAST-220ENST00000508117 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
CAST-220ENST00000508117 RBM42Q9BTD8 480 aaKnown RBP14.11□□□□□ -0.15
CAST-220ENST00000508117 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
CAST-220ENST00000508117 MYOM2P54296 1465 aa14.09□□□□□ -0.15
CAST-220ENST00000508117 BCL9LQ86UU0 1499 aa14.09□□□□□ -0.15
CAST-220ENST00000508117 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
CAST-220ENST00000508117 ZNF326Q5BKZ1 582 aaKnown RBP14.08□□□□□ -0.16
CAST-220ENST00000508117 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
CAST-220ENST00000508117 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.07□□□□□ -0.16
CAST-220ENST00000508117 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
CAST-220ENST00000508117 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
CAST-220ENST00000508117 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
CAST-220ENST00000508117 HFM1A2PYH4 1435 aa14.05□□□□□ -0.16
CAST-220ENST00000508117 BLMP54132 1417 aaPredicted RBP14.05□□□□□ -0.16
CAST-220ENST00000508117 KIF1BO60333 1816 aa14.04□□□□□ -0.16
CAST-220ENST00000508117 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
CAST-220ENST00000508117 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
CAST-220ENST00000508117 PXDNQ92626 1479 aa14.03□□□□□ -0.16
CAST-220ENST00000508117 LRP5O75197 1615 aa14.03□□□□□ -0.16
CAST-220ENST00000508117 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
CAST-220ENST00000508117 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
CAST-220ENST00000508117 ATXN8OSP0DMR3 200 aa14.01□□□□□ -0.17
CAST-220ENST00000508117 POTEHQ6S545 545 aa14.01□□□□□ -0.17
CAST-220ENST00000508117 SLIT2O94813 1529 aa14□□□□□ -0.17
CAST-220ENST00000508117 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
CAST-220ENST00000508117 GLI3P10071 1580 aa14□□□□□ -0.17
CAST-220ENST00000508117 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CAST-220ENST00000508117 UNC5CLQ8IV45 518 aa13.99□□□□□ -0.17
CAST-220ENST00000508117 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
CAST-220ENST00000508117 ESCO1Q5FWF5 840 aa13.98□□□□□ -0.17
CAST-220ENST00000508117 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
CAST-220ENST00000508117 FOXO3O43524 673 aa13.96□□□□□ -0.17
CAST-220ENST00000508117 ONECUT3O60422 494 aaPredicted RBP13.95□□□□□ -0.18
CAST-220ENST00000508117 SF3B2Q13435 895 aaKnown RBP13.95□□□□□ -0.18
CAST-220ENST00000508117 DEFB132Q7Z7B7 95 aa13.95□□□□□ -0.18
CAST-220ENST00000508117 PPLO60437 1756 aa13.94□□□□□ -0.18
CAST-220ENST00000508117 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
CAST-220ENST00000508117 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
CAST-220ENST00000508117 TECPR2O15040 1411 aa13.93□□□□□ -0.18
CAST-220ENST00000508117 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
CAST-220ENST00000508117 KIF1AQ12756 1690 aa13.92□□□□□ -0.18
CAST-220ENST00000508117 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
CAST-220ENST00000508117 NAIPQ13075 1403 aa13.92□□□□□ -0.18
CAST-220ENST00000508117 VPS72Q15906 364 aa13.92□□□□□ -0.18
CAST-220ENST00000508117 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
CAST-220ENST00000508117 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
CAST-220ENST00000508117 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
CAST-220ENST00000508117 ITGAEP38570 1179 aa13.89□□□□□ -0.19
CAST-220ENST00000508117 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
CAST-220ENST00000508117 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
CAST-220ENST00000508117 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
CAST-220ENST00000508117 HRCP23327 699 aa13.88□□□□□ -0.19
CAST-220ENST00000508117 BAG6P46379 1132 aa13.88□□□□□ -0.19
CAST-220ENST00000508117 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
CAST-220ENST00000508117 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
CAST-220ENST00000508117 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
CAST-220ENST00000508117 PSME1Q06323 249 aa13.85□□□□□ -0.19
CAST-220ENST00000508117 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
CAST-220ENST00000508117 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
CAST-220ENST00000508117 SBNO1A3KN83 1393 aa13.84□□□□□ -0.19
CAST-220ENST00000508117 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
CAST-220ENST00000508117 DISP2A7MBM2 1401 aa13.84□□□□□ -0.19
CAST-220ENST00000508117 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
CAST-220ENST00000508117 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
CAST-220ENST00000508117 NUTM2FA1L443 756 aa13.83□□□□□ -0.2
CAST-220ENST00000508117 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
CAST-220ENST00000508117 RGPD1P0DJD0 1748 aa13.83□□□□□ -0.2
CAST-220ENST00000508117 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CAST-220ENST00000508117 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
CAST-220ENST00000508117 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
CAST-220ENST00000508117 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
CAST-220ENST00000508117 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
CAST-220ENST00000508117 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
CAST-220ENST00000508117 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
CAST-220ENST00000508117 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
CAST-220ENST00000508117 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
CAST-220ENST00000508117 STK26Q9P289 416 aa13.81□□□□□ -0.2
CAST-220ENST00000508117 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms