RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
SFXN1-207ENST00000507395 PLEKHH1Q9ULM0 1364 aa26.09■■□□□ 1.77
SFXN1-207ENST00000507395 ORAI2Q96SN7 254 aa26.09■■□□□ 1.77
SFXN1-207ENST00000507395 STK26Q9P289 416 aa26.09■■□□□ 1.77
SFXN1-207ENST00000507395 CFAP70Q5T0N1 1121 aa26.07■■□□□ 1.76
SFXN1-207ENST00000507395 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
SFXN1-207ENST00000507395 SIRT1Q96EB6 747 aa26.05■■□□□ 1.76
SFXN1-207ENST00000507395 SOS2Q07890 1332 aaPredicted RBP26.04■■□□□ 1.76
SFXN1-207ENST00000507395 PNPLA6Q8IY17 1366 aa26.03■■□□□ 1.76
SFXN1-207ENST00000507395 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
SFXN1-207ENST00000507395 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
SFXN1-207ENST00000507395 FMN2Q9NZ56 1722 aa25.98■■□□□ 1.75
SFXN1-207ENST00000507395 DLC1Q96QB1 1528 aa25.96■■□□□ 1.75
SFXN1-207ENST00000507395 NUTM2BA6NNL0 878 aaPredicted RBP25.95■■□□□ 1.74
SFXN1-207ENST00000507395 NUTM2EB1AL46 878 aaPredicted RBP25.95■■□□□ 1.74
SFXN1-207ENST00000507395 NUTM2AQ8IVF1 878 aaPredicted RBP25.95■■□□□ 1.74
SFXN1-207ENST00000507395 DCAF11Q8TEB1 546 aa25.95■■□□□ 1.74
SFXN1-207ENST00000507395 PXDNQ92626 1479 aa25.94■■□□□ 1.74
SFXN1-207ENST00000507395 ESCO1Q5FWF5 840 aa25.94■■□□□ 1.74
SFXN1-207ENST00000507395 MEX3CQ5U5Q3 659 aaKnown RBP25.93■■□□□ 1.74
SFXN1-207ENST00000507395 STAC3Q96MF2 364 aa25.93■■□□□ 1.74
SFXN1-207ENST00000507395 NUTM2FA1L443 756 aa25.91■■□□□ 1.74
SFXN1-207ENST00000507395 KDM2AQ9Y2K7 1162 aa25.91■■□□□ 1.74
SFXN1-207ENST00000507395 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
SFXN1-207ENST00000507395 ZNF772Q68DY9 489 aaPredicted RBP25.9■■□□□ 1.74
SFXN1-207ENST00000507395 PRAM1Q96QH2 718 aa25.9■■□□□ 1.74
SFXN1-207ENST00000507395 NPHP3Q7Z494 1330 aa25.89■■□□□ 1.74
SFXN1-207ENST00000507395 FOXO3O43524 673 aa25.88■■□□□ 1.73
SFXN1-207ENST00000507395 RGPD8O14715 1765 aaPredicted RBP25.87■■□□□ 1.73
SFXN1-207ENST00000507395 ADGRB2O60241 1585 aa25.86■■□□□ 1.73
SFXN1-207ENST00000507395 AFF2P51816 1311 aa25.86■■□□□ 1.73
SFXN1-207ENST00000507395 KIF1AQ12756 1690 aa25.85■■□□□ 1.73
SFXN1-207ENST00000507395 USP32Q8NFA0 1604 aa25.85■■□□□ 1.73
SFXN1-207ENST00000507395 SAFB2Q14151 953 aaKnown RBP eCLIP25.84■■□□□ 1.73
SFXN1-207ENST00000507395 TRAK1Q9UPV9 953 aa25.84■■□□□ 1.73
SFXN1-207ENST00000507395 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
SFXN1-207ENST00000507395 C8orf37Q96NL8 207 aa25.81■■□□□ 1.72
SFXN1-207ENST00000507395 POGKQ9P215 609 aa25.8■■□□□ 1.72
SFXN1-207ENST00000507395 ARHGEF28Q8N1W1 1705 aaKnown RBP25.79■■□□□ 1.72
SFXN1-207ENST00000507395 ADAMTS2O95450 1211 aa25.78■■□□□ 1.72
SFXN1-207ENST00000507395 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
SFXN1-207ENST00000507395 ANKARQ7Z5J8 1434 aa25.78■■□□□ 1.72
SFXN1-207ENST00000507395 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
SFXN1-207ENST00000507395 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
SFXN1-207ENST00000507395 CDK12Q9NYV4 1490 aaPredicted RBP25.75■■□□□ 1.71
SFXN1-207ENST00000507395 RXRBP28702 533 aa25.75■■□□□ 1.71
SFXN1-207ENST00000507395 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
SFXN1-207ENST00000507395 PRR36Q9H6K5 1346 aa25.74■■□□□ 1.71
SFXN1-207ENST00000507395 FNBP4Q8N3X1 1017 aaPredicted RBP25.74■■□□□ 1.71
SFXN1-207ENST00000507395 HIRIP3Q9BW71 556 aaPredicted RBP25.74■■□□□ 1.71
SFXN1-207ENST00000507395 MARF1Q9Y4F3 1742 aaKnown RBP25.74■■□□□ 1.71
SFXN1-207ENST00000507395 MINK1Q8N4C8 1332 aaPredicted RBP25.73■■□□□ 1.71
SFXN1-207ENST00000507395 NGLY1Q96IV0 654 aa25.73■■□□□ 1.71
SFXN1-207ENST00000507395 QTRT2Q9H974 415 aaKnown RBP25.72■■□□□ 1.71
SFXN1-207ENST00000507395 TULP4Q9NRJ4 1543 aa25.71■■□□□ 1.71
SFXN1-207ENST00000507395 WASLO00401 505 aaPredicted RBP25.7■■□□□ 1.7
SFXN1-207ENST00000507395 NBPF1Q3BBV0 1214 aa25.69■■□□□ 1.7
SFXN1-207ENST00000507395 TNS3Q68CZ2 1445 aa25.69■■□□□ 1.7
SFXN1-207ENST00000507395 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
SFXN1-207ENST00000507395 PMFBP1Q8TBY8 1022 aa25.68■■□□□ 1.7
SFXN1-207ENST00000507395 BCL9LQ86UU0 1499 aa25.67■■□□□ 1.7
SFXN1-207ENST00000507395 RGS12O14924 1447 aa25.67■■□□□ 1.7
SFXN1-207ENST00000507395 RBM6P78332 1123 aaKnown RBP25.67■■□□□ 1.7
SFXN1-207ENST00000507395 USP21Q9UK80 565 aa25.67■■□□□ 1.7
SFXN1-207ENST00000507395 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
SFXN1-207ENST00000507395 SIN3AQ96ST3 1273 aa25.66■■□□□ 1.7
SFXN1-207ENST00000507395 ATRNO75882 1429 aa25.65■■□□□ 1.7
SFXN1-207ENST00000507395 PSME1Q06323 249 aa25.65■■□□□ 1.7
SFXN1-207ENST00000507395 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
SFXN1-207ENST00000507395 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
SFXN1-207ENST00000507395 ATP7BP35670 1465 aa25.64■■□□□ 1.69
SFXN1-207ENST00000507395 ABCA3Q99758 1704 aa25.63■■□□□ 1.69
SFXN1-207ENST00000507395 UPF1Q92900 1129 aaKnown RBP eCLIP25.61■■□□□ 1.69
SFXN1-207ENST00000507395 TRPC5Q9UL62 973 aaPredicted RBP25.61■■□□□ 1.69
SFXN1-207ENST00000507395 SLIT2O94813 1529 aa25.61■■□□□ 1.69
SFXN1-207ENST00000507395 ALS2Q96Q42 1657 aa25.61■■□□□ 1.69
SFXN1-207ENST00000507395 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
SFXN1-207ENST00000507395 CABLES1Q8TDN4 633 aa25.59■■□□□ 1.69
SFXN1-207ENST00000507395 ARHGEF10O15013 1369 aa25.58■■□□□ 1.69
SFXN1-207ENST00000507395 NUDT16Q96DE0 195 aaKnown RBP25.57■■□□□ 1.68
SFXN1-207ENST00000507395 CDK19Q9BWU1 502 aa25.57■■□□□ 1.68
SFXN1-207ENST00000507395 TOPAZ1Q8N9V7 1692 aa25.57■■□□□ 1.68
SFXN1-207ENST00000507395 ITSN1Q15811 1721 aa25.57■■□□□ 1.68
SFXN1-207ENST00000507395 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
SFXN1-207ENST00000507395 GPRASP1Q5JY77 1395 aa25.54■■□□□ 1.68
SFXN1-207ENST00000507395 CRYBG1Q9Y4K1 1723 aa25.53■■□□□ 1.68
SFXN1-207ENST00000507395 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
SFXN1-207ENST00000507395 UNC5CLQ8IV45 518 aa25.52■■□□□ 1.68
SFXN1-207ENST00000507395 LMOD2Q6P5Q4 547 aa25.51■■□□□ 1.67
SFXN1-207ENST00000507395 POLR3AO14802 1390 aaPredicted RBP25.51■■□□□ 1.67
SFXN1-207ENST00000507395 GLI3P10071 1580 aa25.51■■□□□ 1.67
SFXN1-207ENST00000507395 PLCH1Q4KWH8 1693 aa25.51■■□□□ 1.67
SFXN1-207ENST00000507395 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
SFXN1-207ENST00000507395 GJD4Q96KN9 370 aaPredicted RBP25.5■■□□□ 1.67
SFXN1-207ENST00000507395 CENPJQ9HC77 1338 aaPredicted RBP25.5■■□□□ 1.67
SFXN1-207ENST00000507395 NWD2Q9ULI1 1742 aa25.49■■□□□ 1.67
SFXN1-207ENST00000507395 QRICH2Q9H0J4 1663 aa25.48■■□□□ 1.67
SFXN1-207ENST00000507395 PLEKHG3A1L390 1219 aa25.48■■□□□ 1.67
SFXN1-207ENST00000507395 CCDC61Q9Y6R9 512 aa25.48■■□□□ 1.67
SFXN1-207ENST00000507395 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms