RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
SSBP2-206ENST00000506960 RNF225M0QZC1 329 aaPredicted RBP9.57□□□□□ -0.88
SSBP2-206ENST00000506960 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
SSBP2-206ENST00000506960 GDF11O95390 407 aa9.56□□□□□ -0.88
SSBP2-206ENST00000506960 TRIM32Q13049 653 aa9.56□□□□□ -0.88
SSBP2-206ENST00000506960 THAP11Q96EK4 314 aa9.56□□□□□ -0.88
SSBP2-206ENST00000506960 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
SSBP2-206ENST00000506960 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
SSBP2-206ENST00000506960 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
SSBP2-206ENST00000506960 FAM160A2Q8N612 972 aaPredicted RBP9.55□□□□□ -0.88
SSBP2-206ENST00000506960 VEGFBP49765 207 aa9.54□□□□□ -0.88
SSBP2-206ENST00000506960 MORN1Q5T089 497 aa9.54□□□□□ -0.88
SSBP2-206ENST00000506960 P3H3Q8IVL6 736 aa9.53□□□□□ -0.88
SSBP2-206ENST00000506960 IGHA1P01876 353 aa9.52□□□□□ -0.89
SSBP2-206ENST00000506960 GSK3AP49840 483 aa9.52□□□□□ -0.89
SSBP2-206ENST00000506960 RASSF7Q02833 373 aa9.52□□□□□ -0.89
SSBP2-206ENST00000506960 PTGDRQ13258 359 aa9.52□□□□□ -0.89
SSBP2-206ENST00000506960 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
SSBP2-206ENST00000506960 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
SSBP2-206ENST00000506960 OATP04181 439 aa9.49□□□□□ -0.89
SSBP2-206ENST00000506960 VSIG8P0DPA2 414 aa9.49□□□□□ -0.89
SSBP2-206ENST00000506960 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
SSBP2-206ENST00000506960 SEMA3EO15041 775 aa9.47□□□□□ -0.89
SSBP2-206ENST00000506960 CAPN5O15484 640 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-206ENST00000506960 BRICD5Q6PL45 260 aa9.47□□□□□ -0.89
SSBP2-206ENST00000506960 FECHP22830 423 aa9.46□□□□□ -0.9
SSBP2-206ENST00000506960 WNT7BP56706 349 aa9.46□□□□□ -0.9
SSBP2-206ENST00000506960 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
SSBP2-206ENST00000506960 PRDM9Q9NQV7 894 aa9.46□□□□□ -0.9
SSBP2-206ENST00000506960 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
SSBP2-206ENST00000506960 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
SSBP2-206ENST00000506960 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
SSBP2-206ENST00000506960 BMP1P13497 986 aa9.44□□□□□ -0.9
SSBP2-206ENST00000506960 XP32Q5T750 250 aa9.44□□□□□ -0.9
SSBP2-206ENST00000506960 FUT2Q10981 343 aa9.43□□□□□ -0.9
SSBP2-206ENST00000506960 FOXK2Q01167 660 aa9.42□□□□□ -0.9
SSBP2-206ENST00000506960 GRIPAP1Q4V328 841 aa9.42□□□□□ -0.9
SSBP2-206ENST00000506960 MMP16P51512 607 aa9.41□□□□□ -0.9
SSBP2-206ENST00000506960 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
SSBP2-206ENST00000506960 PXYLP1Q8TE99 480 aa9.41□□□□□ -0.9
SSBP2-206ENST00000506960 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
SSBP2-206ENST00000506960 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-206ENST00000506960 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
SSBP2-206ENST00000506960 Q3C1V9 767 aa9.4□□□□□ -0.9
SSBP2-206ENST00000506960 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
SSBP2-206ENST00000506960 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
SSBP2-206ENST00000506960 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
SSBP2-206ENST00000506960 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
SSBP2-206ENST00000506960 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
SSBP2-206ENST00000506960 SCARF1Q14162 830 aa9.36□□□□□ -0.91
SSBP2-206ENST00000506960 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-206ENST00000506960 ADAMTS8Q9UP79 889 aa9.35□□□□□ -0.91
SSBP2-206ENST00000506960 FCHSD2O94868 740 aa9.34□□□□□ -0.91
SSBP2-206ENST00000506960 GCGRP47871 477 aa9.34□□□□□ -0.91
SSBP2-206ENST00000506960 SKOR1P84550 965 aa9.34□□□□□ -0.91
SSBP2-206ENST00000506960 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
SSBP2-206ENST00000506960 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
SSBP2-206ENST00000506960 RNF19BQ6ZMZ0 732 aa9.33□□□□□ -0.92
SSBP2-206ENST00000506960 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
SSBP2-206ENST00000506960 METTL3Q86U44 580 aaKnown RBP9.32□□□□□ -0.92
SSBP2-206ENST00000506960 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
SSBP2-206ENST00000506960 KANK3Q6NY19 840 aa9.31□□□□□ -0.92
SSBP2-206ENST00000506960 CCDC24Q8N4L8 307 aa9.31□□□□□ -0.92
SSBP2-206ENST00000506960 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
SSBP2-206ENST00000506960 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
SSBP2-206ENST00000506960 SIAH2O43255 324 aa9.3□□□□□ -0.92
SSBP2-206ENST00000506960 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
SSBP2-206ENST00000506960 GPR37O15354 613 aa9.29□□□□□ -0.92
SSBP2-206ENST00000506960 SMYD5Q6GMV2 418 aa9.29□□□□□ -0.92
SSBP2-206ENST00000506960 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
SSBP2-206ENST00000506960 HIC1Q14526 733 aa9.25□□□□□ -0.93
SSBP2-206ENST00000506960 PLEKHG3A1L390 1219 aa9.24□□□□□ -0.93
SSBP2-206ENST00000506960 IRS1P35568 1242 aa9.24□□□□□ -0.93
SSBP2-206ENST00000506960 MAN1A2O60476 641 aa9.23□□□□□ -0.93
SSBP2-206ENST00000506960 ADAM23O75077 832 aa9.23□□□□□ -0.93
SSBP2-206ENST00000506960 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
SSBP2-206ENST00000506960 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
SSBP2-206ENST00000506960 SCARF2Q96GP6 870 aaPredicted RBP9.22□□□□□ -0.93
SSBP2-206ENST00000506960 GNPATO15228 680 aa9.21□□□□□ -0.94
SSBP2-206ENST00000506960 MARSP56192 900 aaKnown RBP9.21□□□□□ -0.94
SSBP2-206ENST00000506960 PSMG3-AS1Q96PY0 264 aa9.21□□□□□ -0.94
SSBP2-206ENST00000506960 GPIHBP1Q8IV16 184 aa9.2□□□□□ -0.94
SSBP2-206ENST00000506960 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
SSBP2-206ENST00000506960 SOBPA7XYQ1 873 aa9.18□□□□□ -0.94
SSBP2-206ENST00000506960 MPNDQ8N594 471 aa9.18□□□□□ -0.94
SSBP2-206ENST00000506960 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
SSBP2-206ENST00000506960 CNTNAP3Q9BZ76 1288 aa9.18□□□□□ -0.94
SSBP2-206ENST00000506960 MSTNO14793 375 aa9.17□□□□□ -0.94
SSBP2-206ENST00000506960 ADH1CP00326 375 aa9.17□□□□□ -0.94
SSBP2-206ENST00000506960 ZNF385CQ66K41 422 aaPredicted RBP9.16□□□□□ -0.94
SSBP2-206ENST00000506960 NNTQ13423 1086 aa9.15□□□□□ -0.94
SSBP2-206ENST00000506960 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-206ENST00000506960 WDR4P57081 412 aaKnown RBP9.14□□□□□ -0.95
SSBP2-206ENST00000506960 TIMP2P16035 220 aa9.13□□□□□ -0.95
SSBP2-206ENST00000506960 JUNDP17535 347 aa9.13□□□□□ -0.95
SSBP2-206ENST00000506960 KRT76Q01546 638 aa9.13□□□□□ -0.95
SSBP2-206ENST00000506960 NLRP7Q8WX94 980 aa9.13□□□□□ -0.95
SSBP2-206ENST00000506960 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
SSBP2-206ENST00000506960 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-206ENST00000506960 UPP2O95045 317 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms