RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SIRT1Q96EB6 747 aa28.62■■■□□ 2.17
SNX25-204ENST00000506896 CLSPNQ9HAW4 1339 aa28.61■■■□□ 2.17
SNX25-204ENST00000506896 C1orf167Q5SNV9 1468 aa28.59■■■□□ 2.17
SNX25-204ENST00000506896 JCADQ9P266 1359 aa28.59■■■□□ 2.17
SNX25-204ENST00000506896 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
SNX25-204ENST00000506896 KIAA1210Q9ULL0 1709 aa28.57■■■□□ 2.16
SNX25-204ENST00000506896 TONSLQ96HA7 1378 aa28.57■■■□□ 2.16
SNX25-204ENST00000506896 NHSL1Q5SYE7 1610 aa28.57■■■□□ 2.16
SNX25-204ENST00000506896 PLEKHH1Q9ULM0 1364 aa28.56■■■□□ 2.16
SNX25-204ENST00000506896 CDC42BPGQ6DT37 1551 aa28.54■■■□□ 2.16
SNX25-204ENST00000506896 ORAI2Q96SN7 254 aa28.52■■■□□ 2.16
SNX25-204ENST00000506896 DLC1Q96QB1 1528 aa28.52■■■□□ 2.16
SNX25-204ENST00000506896 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.15
SNX25-204ENST00000506896 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
SNX25-204ENST00000506896 SHPRHQ149N8 1683 aa28.49■■■□□ 2.15
SNX25-204ENST00000506896 RGS17Q9UGC6 210 aaPredicted RBP28.49■■■□□ 2.15
SNX25-204ENST00000506896 SPATA31A6Q5VVP1 1343 aa28.46■■■□□ 2.15
SNX25-204ENST00000506896 CCER1Q8TC90 406 aaPredicted RBP28.46■■■□□ 2.15
SNX25-204ENST00000506896 LRRC59Q96AG4 307 aaKnown RBP28.46■■■□□ 2.15
SNX25-204ENST00000506896 TRAK1Q9UPV9 953 aa28.45■■■□□ 2.14
SNX25-204ENST00000506896 PRAM1Q96QH2 718 aa28.44■■■□□ 2.14
SNX25-204ENST00000506896 POGKQ9P215 609 aa28.43■■■□□ 2.14
SNX25-204ENST00000506896 SOS2Q07890 1332 aaPredicted RBP28.43■■■□□ 2.14
SNX25-204ENST00000506896 NBPF1Q3BBV0 1214 aa28.42■■■□□ 2.14
SNX25-204ENST00000506896 TIMELESSQ9UNS1 1208 aa28.42■■■□□ 2.14
SNX25-204ENST00000506896 FMN2Q9NZ56 1722 aa28.42■■■□□ 2.14
SNX25-204ENST00000506896 TRPM1Q7Z4N2 1603 aa28.41■■■□□ 2.14
SNX25-204ENST00000506896 SOCS7O14512 581 aa28.41■■■□□ 2.14
SNX25-204ENST00000506896 ESCO1Q5FWF5 840 aa28.41■■■□□ 2.14
SNX25-204ENST00000506896 LRP6O75581 1613 aa28.4■■■□□ 2.14
SNX25-204ENST00000506896 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
SNX25-204ENST00000506896 SAFB2Q14151 953 aaKnown RBP eCLIP28.38■■■□□ 2.13
SNX25-204ENST00000506896 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
SNX25-204ENST00000506896 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
SNX25-204ENST00000506896 ARHGEF28Q8N1W1 1705 aaKnown RBP28.36■■■□□ 2.13
SNX25-204ENST00000506896 RGPD8O14715 1765 aaPredicted RBP28.35■■■□□ 2.13
SNX25-204ENST00000506896 PNPLA6Q8IY17 1366 aa28.35■■■□□ 2.13
SNX25-204ENST00000506896 NPHP3Q7Z494 1330 aa28.33■■■□□ 2.13
SNX25-204ENST00000506896 FOXO3O43524 673 aa28.32■■■□□ 2.12
SNX25-204ENST00000506896 POTEAQ6S8J7 498 aa28.32■■■□□ 2.12
SNX25-204ENST00000506896 GPRASP1Q5JY77 1395 aa28.32■■■□□ 2.12
SNX25-204ENST00000506896 ADGRB2O60241 1585 aa28.32■■■□□ 2.12
SNX25-204ENST00000506896 RALGAPBQ86X10 1494 aa28.31■■■□□ 2.12
SNX25-204ENST00000506896 PXDNQ92626 1479 aa28.3■■■□□ 2.12
SNX25-204ENST00000506896 NUTM2BA6NNL0 878 aaPredicted RBP28.29■■■□□ 2.12
SNX25-204ENST00000506896 NUTM2EB1AL46 878 aaPredicted RBP28.29■■■□□ 2.12
SNX25-204ENST00000506896 NUTM2AQ8IVF1 878 aaPredicted RBP28.29■■■□□ 2.12
SNX25-204ENST00000506896 KIF1AQ12756 1690 aa28.27■■■□□ 2.12
SNX25-204ENST00000506896 USP32Q8NFA0 1604 aa28.26■■■□□ 2.11
SNX25-204ENST00000506896 MINK1Q8N4C8 1332 aaPredicted RBP28.26■■■□□ 2.11
SNX25-204ENST00000506896 MEX3CQ5U5Q3 659 aaKnown RBP28.26■■■□□ 2.11
SNX25-204ENST00000506896 HIRIP3Q9BW71 556 aaPredicted RBP28.26■■■□□ 2.11
SNX25-204ENST00000506896 EIF3AQ14152 1382 aaKnown RBP28.25■■■□□ 2.11
SNX25-204ENST00000506896 CENPJQ9HC77 1338 aaPredicted RBP28.25■■■□□ 2.11
SNX25-204ENST00000506896 PHF8Q9UPP1 1060 aa28.25■■■□□ 2.11
SNX25-204ENST00000506896 ANKARQ7Z5J8 1434 aa28.25■■■□□ 2.11
SNX25-204ENST00000506896 XPCQ01831 940 aaPredicted RBP28.24■■■□□ 2.11
SNX25-204ENST00000506896 CARD11Q9BXL7 1154 aa28.24■■■□□ 2.11
SNX25-204ENST00000506896 COL22A1Q8NFW1 1626 aaPredicted RBP28.23■■■□□ 2.11
SNX25-204ENST00000506896 WASLO00401 505 aaPredicted RBP28.23■■■□□ 2.11
SNX25-204ENST00000506896 KRT28Q7Z3Y7 464 aa28.2■■■□□ 2.1
SNX25-204ENST00000506896 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
SNX25-204ENST00000506896 ZNF772Q68DY9 489 aaPredicted RBP28.19■■■□□ 2.1
SNX25-204ENST00000506896 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
SNX25-204ENST00000506896 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
SNX25-204ENST00000506896 QRICH2Q9H0J4 1663 aa28.16■■■□□ 2.1
SNX25-204ENST00000506896 PMFBP1Q8TBY8 1022 aa28.15■■■□□ 2.1
SNX25-204ENST00000506896 AFF2P51816 1311 aa28.14■■■□□ 2.09
SNX25-204ENST00000506896 ADAMTS2O95450 1211 aa28.13■■■□□ 2.09
SNX25-204ENST00000506896 PSME1Q06323 249 aa28.13■■■□□ 2.09
SNX25-204ENST00000506896 C8orf37Q96NL8 207 aa28.12■■■□□ 2.09
SNX25-204ENST00000506896 CDK19Q9BWU1 502 aa28.12■■■□□ 2.09
SNX25-204ENST00000506896 SBNO1A3KN83 1393 aa28.11■■■□□ 2.09
SNX25-204ENST00000506896 NUDT16Q96DE0 195 aaKnown RBP28.1■■■□□ 2.09
SNX25-204ENST00000506896 SBNO2Q9Y2G9 1366 aa28.09■■■□□ 2.09
SNX25-204ENST00000506896 ATP7BP35670 1465 aa28.08■■■□□ 2.09
SNX25-204ENST00000506896 NGLY1Q96IV0 654 aa28.08■■■□□ 2.09
SNX25-204ENST00000506896 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
SNX25-204ENST00000506896 EVC2Q86UK5 1308 aa28.07■■■□□ 2.08
SNX25-204ENST00000506896 MARF1Q9Y4F3 1742 aaKnown RBP28.06■■■□□ 2.08
SNX25-204ENST00000506896 FNBP4Q8N3X1 1017 aaPredicted RBP28.06■■■□□ 2.08
SNX25-204ENST00000506896 ITSN1Q15811 1721 aa28.06■■■□□ 2.08
SNX25-204ENST00000506896 SRPK2P78362 688 aaKnown RBP28.05■■■□□ 2.08
SNX25-204ENST00000506896 TRPM3Q9HCF6 1732 aaPredicted RBP28.05■■■□□ 2.08
SNX25-204ENST00000506896 QTRT2Q9H974 415 aaKnown RBP28.03■■■□□ 2.08
SNX25-204ENST00000506896 CCDC61Q9Y6R9 512 aa28.03■■■□□ 2.08
SNX25-204ENST00000506896 SLC24A1O60721 1099 aa28.02■■■□□ 2.08
SNX25-204ENST00000506896 RXRBP28702 533 aa28.02■■■□□ 2.08
SNX25-204ENST00000506896 NGDNQ8NEJ9 315 aaKnown RBP28.02■■■□□ 2.08
SNX25-204ENST00000506896 TOPAZ1Q8N9V7 1692 aa28■■■□□ 2.07
SNX25-204ENST00000506896 ARHGEF10O15013 1369 aa28■■■□□ 2.07
SNX25-204ENST00000506896 USP47Q96K76 1375 aa28■■■□□ 2.07
SNX25-204ENST00000506896 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
SNX25-204ENST00000506896 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
SNX25-204ENST00000506896 USP21Q9UK80 565 aa27.99■■■□□ 2.07
SNX25-204ENST00000506896 ALS2Q96Q42 1657 aa27.99■■■□□ 2.07
SNX25-204ENST00000506896 ST20-MTHFSA0A0A6YYL1 179 aa27.97■■■□□ 2.07
SNX25-204ENST00000506896 CABLES1Q8TDN4 633 aa27.97■■■□□ 2.07
SNX25-204ENST00000506896 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
SNX25-204ENST00000506896 RBM6P78332 1123 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms