RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-220ENST00000506831 COL22A1Q8NFW1 1626 aaPredicted RBP16.91■□□□□ 0.3
CCHCR1-220ENST00000506831 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
CCHCR1-220ENST00000506831 TECPR2O15040 1411 aa16.9■□□□□ 0.3
CCHCR1-220ENST00000506831 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
CCHCR1-220ENST00000506831 SPATA31E1Q6ZUB1 1445 aa16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 USP21Q9UK80 565 aa16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 TRPC5Q9UL62 973 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
CCHCR1-220ENST00000506831 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CCHCR1-220ENST00000506831 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
CCHCR1-220ENST00000506831 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
CCHCR1-220ENST00000506831 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
CCHCR1-220ENST00000506831 MYOM2P54296 1465 aa16.86■□□□□ 0.29
CCHCR1-220ENST00000506831 PXDNQ92626 1479 aa16.86■□□□□ 0.29
CCHCR1-220ENST00000506831 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
CCHCR1-220ENST00000506831 ATRNO75882 1429 aa16.85■□□□□ 0.29
CCHCR1-220ENST00000506831 FOXO3O43524 673 aa16.84■□□□□ 0.29
CCHCR1-220ENST00000506831 WAPLQ7Z5K2 1190 aa16.84■□□□□ 0.29
CCHCR1-220ENST00000506831 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
CCHCR1-220ENST00000506831 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
CCHCR1-220ENST00000506831 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
CCHCR1-220ENST00000506831 STK26Q9P289 416 aa16.83■□□□□ 0.28
CCHCR1-220ENST00000506831 MARF1Q9Y4F3 1742 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-220ENST00000506831 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
CCHCR1-220ENST00000506831 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
CCHCR1-220ENST00000506831 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-220ENST00000506831 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-220ENST00000506831 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
CCHCR1-220ENST00000506831 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
CCHCR1-220ENST00000506831 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
CCHCR1-220ENST00000506831 PLEKHH1Q9ULM0 1364 aa16.78■□□□□ 0.28
CCHCR1-220ENST00000506831 SPATA31A3Q5VYP0 1347 aa16.78■□□□□ 0.28
CCHCR1-220ENST00000506831 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-220ENST00000506831 NUTM2FA1L443 756 aa16.77■□□□□ 0.28
CCHCR1-220ENST00000506831 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-220ENST00000506831 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
CCHCR1-220ENST00000506831 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-220ENST00000506831 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-220ENST00000506831 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
CCHCR1-220ENST00000506831 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
CCHCR1-220ENST00000506831 EP400Q96L91 3159 aa16.75■□□□□ 0.27
CCHCR1-220ENST00000506831 SLIT2O94813 1529 aa16.75■□□□□ 0.27
CCHCR1-220ENST00000506831 PSME1Q06323 249 aa16.74■□□□□ 0.27
CCHCR1-220ENST00000506831 SRCAPQ6ZRS2 3230 aa16.74■□□□□ 0.27
CCHCR1-220ENST00000506831 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
CCHCR1-220ENST00000506831 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
CCHCR1-220ENST00000506831 SBNO1A3KN83 1393 aa16.71■□□□□ 0.27
CCHCR1-220ENST00000506831 RGPD8O14715 1765 aaPredicted RBP16.71■□□□□ 0.27
CCHCR1-220ENST00000506831 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
CCHCR1-220ENST00000506831 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
CCHCR1-220ENST00000506831 ZRANB1Q9UGI0 708 aa16.7■□□□□ 0.26
CCHCR1-220ENST00000506831 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
CCHCR1-220ENST00000506831 PRAM1Q96QH2 718 aa16.69■□□□□ 0.26
CCHCR1-220ENST00000506831 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
CCHCR1-220ENST00000506831 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
CCHCR1-220ENST00000506831 ARHGEF10O15013 1369 aa16.68■□□□□ 0.26
CCHCR1-220ENST00000506831 GLI3P10071 1580 aa16.68■□□□□ 0.26
CCHCR1-220ENST00000506831 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-220ENST00000506831 VPS72Q15906 364 aa16.67■□□□□ 0.26
CCHCR1-220ENST00000506831 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
CCHCR1-220ENST00000506831 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-220ENST00000506831 POGKQ9P215 609 aa16.66■□□□□ 0.26
CCHCR1-220ENST00000506831 NWD2Q9ULI1 1742 aa16.65■□□□□ 0.26
CCHCR1-220ENST00000506831 ADGRB2O60241 1585 aa16.65■□□□□ 0.26
CCHCR1-220ENST00000506831 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 ADGRB1O14514 1584 aa16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.25
CCHCR1-220ENST00000506831 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
CCHCR1-220ENST00000506831 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
CCHCR1-220ENST00000506831 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
CCHCR1-220ENST00000506831 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
CCHCR1-220ENST00000506831 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
CCHCR1-220ENST00000506831 PLCH1Q4KWH8 1693 aa16.6■□□□□ 0.25
CCHCR1-220ENST00000506831 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
CCHCR1-220ENST00000506831 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
CCHCR1-220ENST00000506831 GPRASP1Q5JY77 1395 aa16.6■□□□□ 0.25
CCHCR1-220ENST00000506831 HRCP23327 699 aa16.59■□□□□ 0.25
CCHCR1-220ENST00000506831 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-220ENST00000506831 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-220ENST00000506831 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-220ENST00000506831 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-220ENST00000506831 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
CCHCR1-220ENST00000506831 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-220ENST00000506831 TULP4Q9NRJ4 1543 aa16.57■□□□□ 0.24
CCHCR1-220ENST00000506831 DCAF11Q8TEB1 546 aa16.57■□□□□ 0.24
CCHCR1-220ENST00000506831 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
CCHCR1-220ENST00000506831 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-220ENST00000506831 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
CCHCR1-220ENST00000506831 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-220ENST00000506831 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
CCHCR1-220ENST00000506831 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-220ENST00000506831 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
CCHCR1-220ENST00000506831 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms