RNA–Protein interactions for RNA: ENST00000506725.1

SLC1A3-209, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 1,137 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-209ENST00000506725 ADGBQ8N7X0 1667 aa14.37□□□□□ -0.11
SLC1A3-209ENST00000506725 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
SLC1A3-209ENST00000506725 MIA2Q96PC5 1412 aa14.37□□□□□ -0.11
SLC1A3-209ENST00000506725 LRP6O75581 1613 aa14.37□□□□□ -0.11
SLC1A3-209ENST00000506725 NUTM2BA6NNL0 878 aaPredicted RBP14.36□□□□□ -0.11
SLC1A3-209ENST00000506725 NUTM2EB1AL46 878 aaPredicted RBP14.36□□□□□ -0.11
SLC1A3-209ENST00000506725 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
SLC1A3-209ENST00000506725 NUTM2DQ5VT03 806 aaPredicted RBP14.36□□□□□ -0.11
SLC1A3-209ENST00000506725 NUTM2AQ8IVF1 878 aaPredicted RBP14.36□□□□□ -0.11
SLC1A3-209ENST00000506725 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
SLC1A3-209ENST00000506725 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
SLC1A3-209ENST00000506725 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
SLC1A3-209ENST00000506725 CFDP1Q9UEE9 299 aaPredicted RBP14.35□□□□□ -0.11
SLC1A3-209ENST00000506725 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
SLC1A3-209ENST00000506725 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
SLC1A3-209ENST00000506725 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
SLC1A3-209ENST00000506725 CAMK2BQ13554 666 aa14.34□□□□□ -0.11
SLC1A3-209ENST00000506725 ZNF777Q9ULD5 760 aaPredicted RBP14.34□□□□□ -0.11
SLC1A3-209ENST00000506725 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
SLC1A3-209ENST00000506725 SYCP2Q9BX26 1530 aa14.33□□□□□ -0.12
SLC1A3-209ENST00000506725 ZNF644Q9H582 1327 aaPredicted RBP14.33□□□□□ -0.12
SLC1A3-209ENST00000506725 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
SLC1A3-209ENST00000506725 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
SLC1A3-209ENST00000506725 RGS12O14924 1447 aa14.32□□□□□ -0.12
SLC1A3-209ENST00000506725 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
SLC1A3-209ENST00000506725 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
SLC1A3-209ENST00000506725 SHPRHQ149N8 1683 aa14.3□□□□□ -0.12
SLC1A3-209ENST00000506725 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
SLC1A3-209ENST00000506725 RBM6P78332 1123 aaKnown RBP14.3□□□□□ -0.12
SLC1A3-209ENST00000506725 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
SLC1A3-209ENST00000506725 LRP5O75197 1615 aa14.3□□□□□ -0.12
SLC1A3-209ENST00000506725 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
SLC1A3-209ENST00000506725 SMYD5Q6GMV2 418 aa14.29□□□□□ -0.12
SLC1A3-209ENST00000506725 MSH6P52701 1360 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 PLEKHH2Q8IVE3 1493 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 MBD5Q9P267 1494 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 SLAIN2Q9P270 581 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
SLC1A3-209ENST00000506725 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.12
SLC1A3-209ENST00000506725 AFF2P51816 1311 aa14.27□□□□□ -0.12
SLC1A3-209ENST00000506725 ZMYND10O75800 440 aa14.27□□□□□ -0.13
SLC1A3-209ENST00000506725 HRCP23327 699 aa14.26□□□□□ -0.13
SLC1A3-209ENST00000506725 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
SLC1A3-209ENST00000506725 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
SLC1A3-209ENST00000506725 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
SLC1A3-209ENST00000506725 NGLY1Q96IV0 654 aa14.26□□□□□ -0.13
SLC1A3-209ENST00000506725 ABCC3O15438 1527 aa14.24□□□□□ -0.13
SLC1A3-209ENST00000506725 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 TIE1P35590 1138 aa14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 TXNDC2Q86VQ3 553 aa14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 UBR1Q8IWV7 1749 aa14.23□□□□□ -0.13
SLC1A3-209ENST00000506725 PRDM15P57071 1507 aaPredicted RBP14.22□□□□□ -0.13
SLC1A3-209ENST00000506725 KCNA6P17658 529 aa14.22□□□□□ -0.13
SLC1A3-209ENST00000506725 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
SLC1A3-209ENST00000506725 EP400Q96L91 3159 aa14.22□□□□□ -0.13
SLC1A3-209ENST00000506725 NKTRP30414 1462 aaKnown RBP14.21□□□□□ -0.13
SLC1A3-209ENST00000506725 KIF3BO15066 747 aa14.21□□□□□ -0.13
SLC1A3-209ENST00000506725 DHX29Q7Z478 1369 aaKnown RBP14.21□□□□□ -0.14
SLC1A3-209ENST00000506725 SLIT1O75093 1534 aa14.2□□□□□ -0.14
SLC1A3-209ENST00000506725 TTLL13PA6NNM8 815 aa14.2□□□□□ -0.14
SLC1A3-209ENST00000506725 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
SLC1A3-209ENST00000506725 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
SLC1A3-209ENST00000506725 AHDC1Q5TGY3 1603 aaPredicted RBP14.19□□□□□ -0.14
SLC1A3-209ENST00000506725 PTPN23Q9H3S7 1636 aa14.19□□□□□ -0.14
SLC1A3-209ENST00000506725 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
SLC1A3-209ENST00000506725 LTKP29376 864 aa14.19□□□□□ -0.14
SLC1A3-209ENST00000506725 NEUROD2Q15784 382 aa14.19□□□□□ -0.14
SLC1A3-209ENST00000506725 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
SLC1A3-209ENST00000506725 NWD1Q149M9 1564 aa14.18□□□□□ -0.14
SLC1A3-209ENST00000506725 YY1P25490 414 aa14.18□□□□□ -0.14
SLC1A3-209ENST00000506725 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
SLC1A3-209ENST00000506725 PPP1R15BQ5SWA1 713 aa14.17□□□□□ -0.14
SLC1A3-209ENST00000506725 RSPH4AQ5TD94 716 aa14.17□□□□□ -0.14
SLC1A3-209ENST00000506725 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
SLC1A3-209ENST00000506725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLC1A3-209ENST00000506725 KDM5AP29375 1690 aaKnown RBP14.16□□□□□ -0.14
SLC1A3-209ENST00000506725 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
SLC1A3-209ENST00000506725 MLLT3P42568 568 aaPredicted RBP14.14□□□□□ -0.15
SLC1A3-209ENST00000506725 C8orf37Q96NL8 207 aa14.14□□□□□ -0.15
SLC1A3-209ENST00000506725 BMP2KQ9NSY1 1161 aaPredicted RBP14.14□□□□□ -0.15
SLC1A3-209ENST00000506725 NHSL1Q5SYE7 1610 aa14.13□□□□□ -0.15
SLC1A3-209ENST00000506725 ABCC5O15440 1437 aa14.13□□□□□ -0.15
SLC1A3-209ENST00000506725 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
SLC1A3-209ENST00000506725 TSPY4P0CV99 314 aa14.12□□□□□ -0.15
SLC1A3-209ENST00000506725 TSPY10P0CW01 314 aa14.12□□□□□ -0.15
SLC1A3-209ENST00000506725 CFAP65Q6ZU64 1925 aaKnown RBP14.11□□□□□ -0.15
SLC1A3-209ENST00000506725 DAPK1P53355 1430 aa14.11□□□□□ -0.15
SLC1A3-209ENST00000506725 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
SLC1A3-209ENST00000506725 RBM26Q5T8P6 1007 aaKnown RBP14.11□□□□□ -0.15
SLC1A3-209ENST00000506725 CROCC2H7BZ55 1655 aa14.1□□□□□ -0.15
SLC1A3-209ENST00000506725 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
SLC1A3-209ENST00000506725 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
SLC1A3-209ENST00000506725 TRIM35Q9UPQ4 493 aa14.09□□□□□ -0.15
SLC1A3-209ENST00000506725 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
SLC1A3-209ENST00000506725 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
SLC1A3-209ENST00000506725 DSG2Q14126 1118 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms