RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 DLC1Q96QB1 1528 aa21.23■□□□□ 0.99
DSP-203ENST00000506617 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
DSP-203ENST00000506617 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
DSP-203ENST00000506617 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
DSP-203ENST00000506617 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
DSP-203ENST00000506617 FMN2Q9NZ56 1722 aa21.17■□□□□ 0.98
DSP-203ENST00000506617 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
DSP-203ENST00000506617 C1orf167Q5SNV9 1468 aa21.16■□□□□ 0.98
DSP-203ENST00000506617 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
DSP-203ENST00000506617 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
DSP-203ENST00000506617 NHSL1Q5SYE7 1610 aa21.15■□□□□ 0.98
DSP-203ENST00000506617 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
DSP-203ENST00000506617 TRAK1Q9UPV9 953 aa21.15■□□□□ 0.98
DSP-203ENST00000506617 BRINP3Q76B58 766 aa21.14■□□□□ 0.97
DSP-203ENST00000506617 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
DSP-203ENST00000506617 ADGRB2O60241 1585 aa21.13■□□□□ 0.97
DSP-203ENST00000506617 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
DSP-203ENST00000506617 POGKQ9P215 609 aa21.11■□□□□ 0.97
DSP-203ENST00000506617 RGPD8O14715 1765 aaPredicted RBP21.1■□□□□ 0.97
DSP-203ENST00000506617 MED1Q15648 1581 aaPredicted RBP21.09■□□□□ 0.97
DSP-203ENST00000506617 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
DSP-203ENST00000506617 NUTM2FA1L443 756 aa21.06■□□□□ 0.96
DSP-203ENST00000506617 ORAI2Q96SN7 254 aa21.06■□□□□ 0.96
DSP-203ENST00000506617 USP32Q8NFA0 1604 aa21.05■□□□□ 0.96
DSP-203ENST00000506617 NBPF8Q3BBV2 869 aa21.05■□□□□ 0.96
DSP-203ENST00000506617 MINK1Q8N4C8 1332 aaPredicted RBP21.04■□□□□ 0.96
DSP-203ENST00000506617 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
DSP-203ENST00000506617 KIF1AQ12756 1690 aa21.04■□□□□ 0.96
DSP-203ENST00000506617 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
DSP-203ENST00000506617 QRICH2Q9H0J4 1663 aa21.03■□□□□ 0.96
DSP-203ENST00000506617 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
DSP-203ENST00000506617 DDX17Q92841 729 aaKnown RBP21.03■□□□□ 0.96
DSP-203ENST00000506617 HIRIP3Q9BW71 556 aaPredicted RBP21.03■□□□□ 0.96
DSP-203ENST00000506617 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
DSP-203ENST00000506617 JCADQ9P266 1359 aa21.02■□□□□ 0.96
DSP-203ENST00000506617 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
DSP-203ENST00000506617 TULP4Q9NRJ4 1543 aa21■□□□□ 0.95
DSP-203ENST00000506617 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
DSP-203ENST00000506617 ANKARQ7Z5J8 1434 aa20.99■□□□□ 0.95
DSP-203ENST00000506617 ITSN1Q15811 1721 aa20.97■□□□□ 0.95
DSP-203ENST00000506617 CENPJQ9HC77 1338 aaPredicted RBP20.97■□□□□ 0.95
DSP-203ENST00000506617 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
DSP-203ENST00000506617 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
DSP-203ENST00000506617 PXDNQ92626 1479 aa20.95■□□□□ 0.94
DSP-203ENST00000506617 SOS2Q07890 1332 aaPredicted RBP20.95■□□□□ 0.94
DSP-203ENST00000506617 NPHP3Q7Z494 1330 aa20.95■□□□□ 0.94
DSP-203ENST00000506617 PRR36Q9H6K5 1346 aa20.95■□□□□ 0.94
DSP-203ENST00000506617 ATP7BP35670 1465 aa20.94■□□□□ 0.94
DSP-203ENST00000506617 TOPAZ1Q8N9V7 1692 aa20.93■□□□□ 0.94
DSP-203ENST00000506617 LRP6O75581 1613 aa20.93■□□□□ 0.94
DSP-203ENST00000506617 FOXO3O43524 673 aa20.92■□□□□ 0.94
DSP-203ENST00000506617 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
DSP-203ENST00000506617 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
DSP-203ENST00000506617 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
DSP-203ENST00000506617 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
DSP-203ENST00000506617 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
DSP-203ENST00000506617 SPATA31A6Q5VVP1 1343 aa20.9■□□□□ 0.94
DSP-203ENST00000506617 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
DSP-203ENST00000506617 COL22A1Q8NFW1 1626 aaPredicted RBP20.89■□□□□ 0.93
DSP-203ENST00000506617 PMFBP1Q8TBY8 1022 aa20.88■□□□□ 0.93
DSP-203ENST00000506617 NUDT16Q96DE0 195 aaKnown RBP20.86■□□□□ 0.93
DSP-203ENST00000506617 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
DSP-203ENST00000506617 TRPM3Q9HCF6 1732 aaPredicted RBP20.86■□□□□ 0.93
DSP-203ENST00000506617 SLC24A1O60721 1099 aa20.85■□□□□ 0.93
DSP-203ENST00000506617 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
DSP-203ENST00000506617 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.93
DSP-203ENST00000506617 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.93
DSP-203ENST00000506617 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.93
DSP-203ENST00000506617 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.93
DSP-203ENST00000506617 TNS3Q68CZ2 1445 aa20.82■□□□□ 0.92
DSP-203ENST00000506617 CABP2Q9NPB3 220 aa20.82■□□□□ 0.92
DSP-203ENST00000506617 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
DSP-203ENST00000506617 USP47Q96K76 1375 aa20.81■□□□□ 0.92
DSP-203ENST00000506617 SPATA31A3Q5VYP0 1347 aa20.8■□□□□ 0.92
DSP-203ENST00000506617 EVC2Q86UK5 1308 aa20.8■□□□□ 0.92
DSP-203ENST00000506617 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
DSP-203ENST00000506617 PSME1Q06323 249 aa20.8■□□□□ 0.92
DSP-203ENST00000506617 MEX3CQ5U5Q3 659 aaKnown RBP20.8■□□□□ 0.92
DSP-203ENST00000506617 SBNO1A3KN83 1393 aa20.8■□□□□ 0.92
DSP-203ENST00000506617 ABCA3Q99758 1704 aa20.79■□□□□ 0.92
DSP-203ENST00000506617 EIF4G2P78344 907 aaKnown RBP eCLIP20.79■□□□□ 0.92
DSP-203ENST00000506617 NGDNQ8NEJ9 315 aaKnown RBP20.79■□□□□ 0.92
DSP-203ENST00000506617 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
DSP-203ENST00000506617 PPIP5K1Q6PFW1 1433 aa20.78■□□□□ 0.92
DSP-203ENST00000506617 MARF1Q9Y4F3 1742 aaKnown RBP20.78■□□□□ 0.92
DSP-203ENST00000506617 RGS17Q9UGC6 210 aaPredicted RBP20.77■□□□□ 0.92
DSP-203ENST00000506617 POLR3AO14802 1390 aaPredicted RBP20.76■□□□□ 0.91
DSP-203ENST00000506617 PLEKHG3A1L390 1219 aa20.75■□□□□ 0.91
DSP-203ENST00000506617 ILDR2Q71H61 639 aa20.75■□□□□ 0.91
DSP-203ENST00000506617 ACEP12821 1306 aa20.75■□□□□ 0.91
DSP-203ENST00000506617 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
DSP-203ENST00000506617 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
DSP-203ENST00000506617 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
DSP-203ENST00000506617 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
DSP-203ENST00000506617 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
DSP-203ENST00000506617 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
DSP-203ENST00000506617 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
DSP-203ENST00000506617 TESK2Q96S53 571 aa20.72■□□□□ 0.91
DSP-203ENST00000506617 ATAD2Q6PL18 1390 aa20.72■□□□□ 0.91
DSP-203ENST00000506617 C8orf37Q96NL8 207 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms