RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
RCN1-202ENST00000506388 LTBP4Q8N2S1 1624 aa18.68■□□□□ 0.58
RCN1-202ENST00000506388 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
RCN1-202ENST00000506388 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
RCN1-202ENST00000506388 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
RCN1-202ENST00000506388 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
RCN1-202ENST00000506388 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
RCN1-202ENST00000506388 LRRC7Q96NW7 1537 aa18.67■□□□□ 0.58
RCN1-202ENST00000506388 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
RCN1-202ENST00000506388 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
RCN1-202ENST00000506388 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
RCN1-202ENST00000506388 DCCP43146 1447 aa18.65■□□□□ 0.58
RCN1-202ENST00000506388 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
RCN1-202ENST00000506388 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
RCN1-202ENST00000506388 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
RCN1-202ENST00000506388 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
RCN1-202ENST00000506388 WASLO00401 505 aaPredicted RBP18.62■□□□□ 0.57
RCN1-202ENST00000506388 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
RCN1-202ENST00000506388 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
RCN1-202ENST00000506388 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
RCN1-202ENST00000506388 C11orf95C9JLR9 678 aaPredicted RBP18.61■□□□□ 0.57
RCN1-202ENST00000506388 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
RCN1-202ENST00000506388 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
RCN1-202ENST00000506388 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
RCN1-202ENST00000506388 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
RCN1-202ENST00000506388 ANKARQ7Z5J8 1434 aa18.59■□□□□ 0.57
RCN1-202ENST00000506388 ATAD2Q6PL18 1390 aa18.58■□□□□ 0.57
RCN1-202ENST00000506388 NINLQ9Y2I6 1382 aa18.58■□□□□ 0.57
RCN1-202ENST00000506388 CDK19Q9BWU1 502 aa18.58■□□□□ 0.57
RCN1-202ENST00000506388 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
RCN1-202ENST00000506388 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
RCN1-202ENST00000506388 MYOM1P52179 1685 aa18.56■□□□□ 0.56
RCN1-202ENST00000506388 TOPAZ1Q8N9V7 1692 aa18.56■□□□□ 0.56
RCN1-202ENST00000506388 MSH6P52701 1360 aa18.56■□□□□ 0.56
RCN1-202ENST00000506388 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
RCN1-202ENST00000506388 ATP7BP35670 1465 aa18.56■□□□□ 0.56
RCN1-202ENST00000506388 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
RCN1-202ENST00000506388 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
RCN1-202ENST00000506388 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
RCN1-202ENST00000506388 CCDC61Q9Y6R9 512 aa18.52■□□□□ 0.56
RCN1-202ENST00000506388 RGPD8O14715 1765 aaPredicted RBP18.52■□□□□ 0.56
RCN1-202ENST00000506388 NUDT16Q96DE0 195 aaKnown RBP18.51■□□□□ 0.55
RCN1-202ENST00000506388 RBM33Q96EV2 1170 aaKnown RBP18.51■□□□□ 0.55
RCN1-202ENST00000506388 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
RCN1-202ENST00000506388 PRR36Q9H6K5 1346 aa18.5■□□□□ 0.55
RCN1-202ENST00000506388 MST1RQ04912 1400 aa18.5■□□□□ 0.55
RCN1-202ENST00000506388 ATF3P18847 181 aa18.5■□□□□ 0.55
RCN1-202ENST00000506388 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
RCN1-202ENST00000506388 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
RCN1-202ENST00000506388 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
RCN1-202ENST00000506388 PPIP5K1Q6PFW1 1433 aa18.46■□□□□ 0.55
RCN1-202ENST00000506388 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
RCN1-202ENST00000506388 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
RCN1-202ENST00000506388 ANKRD36BQ8N2N9 1353 aa18.45■□□□□ 0.54
RCN1-202ENST00000506388 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
RCN1-202ENST00000506388 CD163L1Q9NR16 1453 aa18.45■□□□□ 0.54
RCN1-202ENST00000506388 SLC12A5Q9H2X9 1139 aa18.44■□□□□ 0.54
RCN1-202ENST00000506388 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
RCN1-202ENST00000506388 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
RCN1-202ENST00000506388 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
RCN1-202ENST00000506388 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
RCN1-202ENST00000506388 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
RCN1-202ENST00000506388 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
RCN1-202ENST00000506388 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
RCN1-202ENST00000506388 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
RCN1-202ENST00000506388 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
RCN1-202ENST00000506388 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
RCN1-202ENST00000506388 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
RCN1-202ENST00000506388 PANK3Q9H999 370 aa18.39■□□□□ 0.53
RCN1-202ENST00000506388 PHF8Q9UPP1 1060 aa18.39■□□□□ 0.53
RCN1-202ENST00000506388 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
RCN1-202ENST00000506388 ACEP12821 1306 aa18.38■□□□□ 0.53
RCN1-202ENST00000506388 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
RCN1-202ENST00000506388 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
RCN1-202ENST00000506388 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
RCN1-202ENST00000506388 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
RCN1-202ENST00000506388 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
RCN1-202ENST00000506388 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
RCN1-202ENST00000506388 USP6P35125 1406 aa18.36■□□□□ 0.53
RCN1-202ENST00000506388 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
RCN1-202ENST00000506388 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
RCN1-202ENST00000506388 TOM1O60784 492 aa18.35■□□□□ 0.53
RCN1-202ENST00000506388 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
RCN1-202ENST00000506388 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
RCN1-202ENST00000506388 BRINP3Q76B58 766 aa18.34■□□□□ 0.53
RCN1-202ENST00000506388 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
RCN1-202ENST00000506388 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
RCN1-202ENST00000506388 PMFBP1Q8TBY8 1022 aa18.32■□□□□ 0.52
RCN1-202ENST00000506388 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
RCN1-202ENST00000506388 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
RCN1-202ENST00000506388 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
RCN1-202ENST00000506388 NSD2O96028 1365 aa18.32■□□□□ 0.52
RCN1-202ENST00000506388 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
RCN1-202ENST00000506388 NSD3Q9BZ95 1437 aa18.31■□□□□ 0.52
RCN1-202ENST00000506388 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
RCN1-202ENST00000506388 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
RCN1-202ENST00000506388 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
RCN1-202ENST00000506388 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
RCN1-202ENST00000506388 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
RCN1-202ENST00000506388 PXDNQ92626 1479 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms