RNA–Protein interactions for RNA: ENST00000506178.1

SLC1A3-208, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-208ENST00000506178 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
SLC1A3-208ENST00000506178 MYOM2P54296 1465 aa15.28■□□□□ 0.04
SLC1A3-208ENST00000506178 ATRNO75882 1429 aa15.28■□□□□ 0.04
SLC1A3-208ENST00000506178 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
SLC1A3-208ENST00000506178 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
SLC1A3-208ENST00000506178 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.03
SLC1A3-208ENST00000506178 PXDNQ92626 1479 aa15.27■□□□□ 0.03
SLC1A3-208ENST00000506178 EP400Q96L91 3159 aa15.26■□□□□ 0.03
SLC1A3-208ENST00000506178 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
SLC1A3-208ENST00000506178 TRPC5Q9UL62 973 aaPredicted RBP15.26■□□□□ 0.03
SLC1A3-208ENST00000506178 PPLO60437 1756 aa15.26■□□□□ 0.03
SLC1A3-208ENST00000506178 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
SLC1A3-208ENST00000506178 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
SLC1A3-208ENST00000506178 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
SLC1A3-208ENST00000506178 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
SLC1A3-208ENST00000506178 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
SLC1A3-208ENST00000506178 FOXO3O43524 673 aa15.22■□□□□ 0.03
SLC1A3-208ENST00000506178 ESCO1Q5FWF5 840 aa15.22■□□□□ 0.03
SLC1A3-208ENST00000506178 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
SLC1A3-208ENST00000506178 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.02
SLC1A3-208ENST00000506178 NPHP3Q7Z494 1330 aa15.2■□□□□ 0.02
SLC1A3-208ENST00000506178 TECPR2O15040 1411 aa15.2■□□□□ 0.02
SLC1A3-208ENST00000506178 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
SLC1A3-208ENST00000506178 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
SLC1A3-208ENST00000506178 NUTM2FA1L443 756 aa15.19■□□□□ 0.02
SLC1A3-208ENST00000506178 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
SLC1A3-208ENST00000506178 GJD4Q96KN9 370 aaPredicted RBP15.18■□□□□ 0.02
SLC1A3-208ENST00000506178 STK26Q9P289 416 aa15.18■□□□□ 0.02
SLC1A3-208ENST00000506178 GLI3P10071 1580 aa15.17■□□□□ 0.02
SLC1A3-208ENST00000506178 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
SLC1A3-208ENST00000506178 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
SLC1A3-208ENST00000506178 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
SLC1A3-208ENST00000506178 SLIT2O94813 1529 aa15.16■□□□□ 0.02
SLC1A3-208ENST00000506178 SPATA31A3Q5VYP0 1347 aa15.15■□□□□ 0.02
SLC1A3-208ENST00000506178 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 RGL3Q3MIN7 710 aa15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
SLC1A3-208ENST00000506178 PIK3C2GO75747 1445 aa15.13■□□□□ 0.01
SLC1A3-208ENST00000506178 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
SLC1A3-208ENST00000506178 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
SLC1A3-208ENST00000506178 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
SLC1A3-208ENST00000506178 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
SLC1A3-208ENST00000506178 KRT28Q7Z3Y7 464 aa15.11■□□□□ 0.01
SLC1A3-208ENST00000506178 ANKRD30BQ9BXX2 1392 aa15.11■□□□□ 0.01
SLC1A3-208ENST00000506178 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
SLC1A3-208ENST00000506178 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
SLC1A3-208ENST00000506178 BRWD3Q6RI45 1802 aa15.1■□□□□ 0.01
SLC1A3-208ENST00000506178 USP32Q8NFA0 1604 aa15.1■□□□□ 0.01
SLC1A3-208ENST00000506178 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
SLC1A3-208ENST00000506178 RGPD8O14715 1765 aaPredicted RBP15.08■□□□□ 0.01
SLC1A3-208ENST00000506178 DEFB132Q7Z7B7 95 aa15.08■□□□□ 0
SLC1A3-208ENST00000506178 SIRT1Q96EB6 747 aa15.08■□□□□ 0
SLC1A3-208ENST00000506178 KIF1AQ12756 1690 aa15.08■□□□□ 0
SLC1A3-208ENST00000506178 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0
SLC1A3-208ENST00000506178 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
SLC1A3-208ENST00000506178 SEPT12Q8IYM1 358 aa15.07■□□□□ 0
SLC1A3-208ENST00000506178 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
SLC1A3-208ENST00000506178 NRXN1Q9ULB1 1477 aa15.07■□□□□ 0
SLC1A3-208ENST00000506178 VPS72Q15906 364 aa15.06■□□□□ 0
SLC1A3-208ENST00000506178 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
SLC1A3-208ENST00000506178 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
SLC1A3-208ENST00000506178 CFAP70Q5T0N1 1121 aa15.05■□□□□ -0
SLC1A3-208ENST00000506178 ABCA3Q99758 1704 aa15.04■□□□□ -0
SLC1A3-208ENST00000506178 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
SLC1A3-208ENST00000506178 FAM83GA6ND36 823 aa15.04■□□□□ -0
SLC1A3-208ENST00000506178 SBNO1A3KN83 1393 aa15.03■□□□□ -0
SLC1A3-208ENST00000506178 PLEKHG5O94827 1062 aa15.03■□□□□ -0
SLC1A3-208ENST00000506178 SAFB2Q14151 953 aaKnown RBP eCLIP15.02■□□□□ -0
SLC1A3-208ENST00000506178 PRAM1Q96QH2 718 aa15.02■□□□□ -0
SLC1A3-208ENST00000506178 NWD2Q9ULI1 1742 aa15.01□□□□□ -0.01
SLC1A3-208ENST00000506178 PSME1Q06323 249 aa15□□□□□ -0.01
SLC1A3-208ENST00000506178 KRT27Q7Z3Y8 459 aa15□□□□□ -0.01
SLC1A3-208ENST00000506178 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
SLC1A3-208ENST00000506178 NRAPQ86VF7 1730 aa14.99□□□□□ -0.01
SLC1A3-208ENST00000506178 TRPM3Q9HCF6 1732 aaPredicted RBP14.99□□□□□ -0.01
SLC1A3-208ENST00000506178 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
SLC1A3-208ENST00000506178 PRR36Q9H6K5 1346 aa14.98□□□□□ -0.01
SLC1A3-208ENST00000506178 ADGRB1O14514 1584 aa14.98□□□□□ -0.01
SLC1A3-208ENST00000506178 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
SLC1A3-208ENST00000506178 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
SLC1A3-208ENST00000506178 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
SLC1A3-208ENST00000506178 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
SLC1A3-208ENST00000506178 ADGRB2O60241 1585 aa14.96□□□□□ -0.01
SLC1A3-208ENST00000506178 ANKARQ7Z5J8 1434 aa14.96□□□□□ -0.01
SLC1A3-208ENST00000506178 CCDC9Q9Y3X0 531 aaKnown RBP14.96□□□□□ -0.01
SLC1A3-208ENST00000506178 ALS2Q96Q42 1657 aa14.96□□□□□ -0.01
SLC1A3-208ENST00000506178 LRP5O75197 1615 aa14.95□□□□□ -0.02
SLC1A3-208ENST00000506178 FAM98CQ17RN3 349 aaKnown RBP14.95□□□□□ -0.02
SLC1A3-208ENST00000506178 FAM182BQ5T319 152 aa14.95□□□□□ -0.02
SLC1A3-208ENST00000506178 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
SLC1A3-208ENST00000506178 BTG4Q9NY30 223 aa14.95□□□□□ -0.02
SLC1A3-208ENST00000506178 PSDA5PKW4 1024 aaPredicted RBP14.94□□□□□ -0.02
SLC1A3-208ENST00000506178 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
SLC1A3-208ENST00000506178 HRCP23327 699 aa14.93□□□□□ -0.02
SLC1A3-208ENST00000506178 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
SLC1A3-208ENST00000506178 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
SLC1A3-208ENST00000506178 POGKQ9P215 609 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms