RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
MBD4-205ENST00000505883 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
MBD4-205ENST00000505883 SAFB2Q14151 953 aaKnown RBP eCLIP23.69■■□□□ 1.38
MBD4-205ENST00000505883 POGKQ9P215 609 aa23.68■■□□□ 1.38
MBD4-205ENST00000505883 C1orf167Q5SNV9 1468 aa23.68■■□□□ 1.38
MBD4-205ENST00000505883 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
MBD4-205ENST00000505883 DLC1Q96QB1 1528 aa23.67■■□□□ 1.38
MBD4-205ENST00000505883 ORAI2Q96SN7 254 aa23.65■■□□□ 1.38
MBD4-205ENST00000505883 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
MBD4-205ENST00000505883 NUTM2FA1L443 756 aa23.63■■□□□ 1.37
MBD4-205ENST00000505883 PHLPP1O60346 1717 aa23.62■■□□□ 1.37
MBD4-205ENST00000505883 DDX17Q92841 729 aaKnown RBP23.62■■□□□ 1.37
MBD4-205ENST00000505883 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
MBD4-205ENST00000505883 DISP3Q9P2K9 1392 aa23.61■■□□□ 1.37
MBD4-205ENST00000505883 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
MBD4-205ENST00000505883 ESCO1Q5FWF5 840 aa23.6■■□□□ 1.37
MBD4-205ENST00000505883 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
MBD4-205ENST00000505883 COL16A1Q07092 1604 aaPredicted RBP23.59■■□□□ 1.37
MBD4-205ENST00000505883 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.37
MBD4-205ENST00000505883 MINK1Q8N4C8 1332 aaPredicted RBP23.58■■□□□ 1.36
MBD4-205ENST00000505883 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
MBD4-205ENST00000505883 JCADQ9P266 1359 aa23.56■■□□□ 1.36
MBD4-205ENST00000505883 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
MBD4-205ENST00000505883 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
MBD4-205ENST00000505883 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
MBD4-205ENST00000505883 ARHGEF28Q8N1W1 1705 aaKnown RBP23.52■■□□□ 1.36
MBD4-205ENST00000505883 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
MBD4-205ENST00000505883 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
MBD4-205ENST00000505883 ADGRB2O60241 1585 aa23.51■■□□□ 1.35
MBD4-205ENST00000505883 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
MBD4-205ENST00000505883 FOXO3O43524 673 aa23.5■■□□□ 1.35
MBD4-205ENST00000505883 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
MBD4-205ENST00000505883 SOS2Q07890 1332 aaPredicted RBP23.5■■□□□ 1.35
MBD4-205ENST00000505883 MSH5O43196 834 aa23.49■■□□□ 1.35
MBD4-205ENST00000505883 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
MBD4-205ENST00000505883 PHF8Q9UPP1 1060 aa23.47■■□□□ 1.35
MBD4-205ENST00000505883 XPCQ01831 940 aaPredicted RBP23.46■■□□□ 1.35
MBD4-205ENST00000505883 SPATA31A6Q5VVP1 1343 aa23.46■■□□□ 1.35
MBD4-205ENST00000505883 ANKARQ7Z5J8 1434 aa23.46■■□□□ 1.35
MBD4-205ENST00000505883 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
MBD4-205ENST00000505883 CENPJQ9HC77 1338 aaPredicted RBP23.46■■□□□ 1.35
MBD4-205ENST00000505883 PRR36Q9H6K5 1346 aa23.45■■□□□ 1.34
MBD4-205ENST00000505883 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
MBD4-205ENST00000505883 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
MBD4-205ENST00000505883 GPRASP1Q5JY77 1395 aa23.43■■□□□ 1.34
MBD4-205ENST00000505883 CCER1Q8TC90 406 aaPredicted RBP23.43■■□□□ 1.34
MBD4-205ENST00000505883 PXDNQ92626 1479 aa23.43■■□□□ 1.34
MBD4-205ENST00000505883 PNPLA6Q8IY17 1366 aa23.42■■□□□ 1.34
MBD4-205ENST00000505883 SHPRHQ149N8 1683 aa23.42■■□□□ 1.34
MBD4-205ENST00000505883 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
MBD4-205ENST00000505883 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
MBD4-205ENST00000505883 TULP4Q9NRJ4 1543 aa23.42■■□□□ 1.34
MBD4-205ENST00000505883 NUTM2BA6NNL0 878 aaPredicted RBP23.41■■□□□ 1.34
MBD4-205ENST00000505883 NUTM2EB1AL46 878 aaPredicted RBP23.41■■□□□ 1.34
MBD4-205ENST00000505883 NUTM2AQ8IVF1 878 aaPredicted RBP23.41■■□□□ 1.34
MBD4-205ENST00000505883 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
MBD4-205ENST00000505883 KRT28Q7Z3Y7 464 aa23.4■■□□□ 1.34
MBD4-205ENST00000505883 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
MBD4-205ENST00000505883 LRP6O75581 1613 aa23.4■■□□□ 1.34
MBD4-205ENST00000505883 KIF1AQ12756 1690 aa23.39■■□□□ 1.34
MBD4-205ENST00000505883 RALGAPBQ86X10 1494 aa23.39■■□□□ 1.34
MBD4-205ENST00000505883 ILDR2Q71H61 639 aa23.39■■□□□ 1.33
MBD4-205ENST00000505883 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
MBD4-205ENST00000505883 PSME1Q06323 249 aa23.37■■□□□ 1.33
MBD4-205ENST00000505883 RGS17Q9UGC6 210 aaPredicted RBP23.37■■□□□ 1.33
MBD4-205ENST00000505883 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
MBD4-205ENST00000505883 TIMELESSQ9UNS1 1208 aa23.36■■□□□ 1.33
MBD4-205ENST00000505883 ATP7BP35670 1465 aa23.36■■□□□ 1.33
MBD4-205ENST00000505883 SRPK2P78362 688 aaKnown RBP23.34■■□□□ 1.33
MBD4-205ENST00000505883 CABP2Q9NPB3 220 aa23.34■■□□□ 1.33
MBD4-205ENST00000505883 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.33
MBD4-205ENST00000505883 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
MBD4-205ENST00000505883 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
MBD4-205ENST00000505883 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
MBD4-205ENST00000505883 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
MBD4-205ENST00000505883 SBNO1A3KN83 1393 aa23.29■■□□□ 1.32
MBD4-205ENST00000505883 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
MBD4-205ENST00000505883 TNS3Q68CZ2 1445 aa23.28■■□□□ 1.32
MBD4-205ENST00000505883 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
MBD4-205ENST00000505883 LMOD2Q6P5Q4 547 aa23.27■■□□□ 1.32
MBD4-205ENST00000505883 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
MBD4-205ENST00000505883 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
MBD4-205ENST00000505883 ACEP12821 1306 aa23.26■■□□□ 1.31
MBD4-205ENST00000505883 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
MBD4-205ENST00000505883 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
MBD4-205ENST00000505883 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
MBD4-205ENST00000505883 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
MBD4-205ENST00000505883 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
MBD4-205ENST00000505883 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
MBD4-205ENST00000505883 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
MBD4-205ENST00000505883 CABP1Q9NZU7 370 aa23.23■■□□□ 1.31
MBD4-205ENST00000505883 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
MBD4-205ENST00000505883 AFF2P51816 1311 aa23.22■■□□□ 1.31
MBD4-205ENST00000505883 ARHGEF10O15013 1369 aa23.22■■□□□ 1.31
MBD4-205ENST00000505883 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
MBD4-205ENST00000505883 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
MBD4-205ENST00000505883 CABLES1Q8TDN4 633 aa23.21■■□□□ 1.31
MBD4-205ENST00000505883 NGLY1Q96IV0 654 aa23.21■■□□□ 1.31
MBD4-205ENST00000505883 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
MBD4-205ENST00000505883 TESK2Q96S53 571 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms