RNA–Protein interactions for RNA: ENST00000505591.1

COL25A1-206, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 3

Gene COL25A1, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-206ENST00000505591 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
COL25A1-206ENST00000505591 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
COL25A1-206ENST00000505591 FNBP4Q8N3X1 1017 aaPredicted RBP18.81■□□□□ 0.6
COL25A1-206ENST00000505591 PPLO60437 1756 aa18.79■□□□□ 0.6
COL25A1-206ENST00000505591 CDC42BPGQ6DT37 1551 aa18.79■□□□□ 0.6
COL25A1-206ENST00000505591 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
COL25A1-206ENST00000505591 FOXD1Q16676 465 aa18.78■□□□□ 0.6
COL25A1-206ENST00000505591 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
COL25A1-206ENST00000505591 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
COL25A1-206ENST00000505591 MYOM2P54296 1465 aa18.76■□□□□ 0.59
COL25A1-206ENST00000505591 ATRNO75882 1429 aa18.75■□□□□ 0.59
COL25A1-206ENST00000505591 PXDNQ92626 1479 aa18.74■□□□□ 0.59
COL25A1-206ENST00000505591 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
COL25A1-206ENST00000505591 TECPR2O15040 1411 aa18.74■□□□□ 0.59
COL25A1-206ENST00000505591 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
COL25A1-206ENST00000505591 FOXO3O43524 673 aa18.72■□□□□ 0.59
COL25A1-206ENST00000505591 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
COL25A1-206ENST00000505591 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
COL25A1-206ENST00000505591 CCDC125Q86Z20 511 aa18.7■□□□□ 0.58
COL25A1-206ENST00000505591 STK26Q9P289 416 aa18.7■□□□□ 0.58
COL25A1-206ENST00000505591 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
COL25A1-206ENST00000505591 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
COL25A1-206ENST00000505591 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
COL25A1-206ENST00000505591 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
COL25A1-206ENST00000505591 XPCQ01831 940 aaPredicted RBP18.67■□□□□ 0.58
COL25A1-206ENST00000505591 GJD4Q96KN9 370 aaPredicted RBP18.67■□□□□ 0.58
COL25A1-206ENST00000505591 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
COL25A1-206ENST00000505591 MARF1Q9Y4F3 1742 aaKnown RBP18.66■□□□□ 0.58
COL25A1-206ENST00000505591 KNDC1Q76NI1 1749 aa18.66■□□□□ 0.58
COL25A1-206ENST00000505591 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
COL25A1-206ENST00000505591 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
COL25A1-206ENST00000505591 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
COL25A1-206ENST00000505591 KIF1AQ12756 1690 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 IFT172Q9UG01 1749 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 UNC5CLQ8IV45 518 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 MPHOSPH9Q99550 1183 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 SPATA31A3Q5VYP0 1347 aa18.64■□□□□ 0.57
COL25A1-206ENST00000505591 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
COL25A1-206ENST00000505591 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
COL25A1-206ENST00000505591 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
COL25A1-206ENST00000505591 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
COL25A1-206ENST00000505591 SLIT2O94813 1529 aa18.62■□□□□ 0.57
COL25A1-206ENST00000505591 FMN2Q9NZ56 1722 aa18.62■□□□□ 0.57
COL25A1-206ENST00000505591 PSME1Q06323 249 aa18.61■□□□□ 0.57
COL25A1-206ENST00000505591 KRT28Q7Z3Y7 464 aa18.61■□□□□ 0.57
COL25A1-206ENST00000505591 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
COL25A1-206ENST00000505591 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
COL25A1-206ENST00000505591 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
COL25A1-206ENST00000505591 PHF8Q9UPP1 1060 aa18.58■□□□□ 0.56
COL25A1-206ENST00000505591 TNS3Q68CZ2 1445 aa18.57■□□□□ 0.56
COL25A1-206ENST00000505591 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
COL25A1-206ENST00000505591 USP32Q8NFA0 1604 aa18.57■□□□□ 0.56
COL25A1-206ENST00000505591 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
COL25A1-206ENST00000505591 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
COL25A1-206ENST00000505591 GLI3P10071 1580 aa18.55■□□□□ 0.56
COL25A1-206ENST00000505591 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
COL25A1-206ENST00000505591 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
COL25A1-206ENST00000505591 VPS72Q15906 364 aa18.54■□□□□ 0.56
COL25A1-206ENST00000505591 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
COL25A1-206ENST00000505591 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.56
COL25A1-206ENST00000505591 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
COL25A1-206ENST00000505591 SEPT12Q8IYM1 358 aa18.51■□□□□ 0.55
COL25A1-206ENST00000505591 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
COL25A1-206ENST00000505591 NWD2Q9ULI1 1742 aa18.5■□□□□ 0.55
COL25A1-206ENST00000505591 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
COL25A1-206ENST00000505591 LMOD2Q6P5Q4 547 aa18.5■□□□□ 0.55
COL25A1-206ENST00000505591 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
COL25A1-206ENST00000505591 POGKQ9P215 609 aa18.5■□□□□ 0.55
COL25A1-206ENST00000505591 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
COL25A1-206ENST00000505591 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
COL25A1-206ENST00000505591 RGPD8O14715 1765 aaPredicted RBP18.48■□□□□ 0.55
COL25A1-206ENST00000505591 SAFB2Q14151 953 aaKnown RBP eCLIP18.48■□□□□ 0.55
COL25A1-206ENST00000505591 EIF3AQ14152 1382 aaKnown RBP18.47■□□□□ 0.55
COL25A1-206ENST00000505591 KRT27Q7Z3Y8 459 aa18.47■□□□□ 0.55
COL25A1-206ENST00000505591 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
COL25A1-206ENST00000505591 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
COL25A1-206ENST00000505591 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
COL25A1-206ENST00000505591 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
COL25A1-206ENST00000505591 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
COL25A1-206ENST00000505591 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
COL25A1-206ENST00000505591 ABCA3Q99758 1704 aa18.45■□□□□ 0.54
COL25A1-206ENST00000505591 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
COL25A1-206ENST00000505591 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
COL25A1-206ENST00000505591 A0A0G2JS52 829 aa18.42■□□□□ 0.54
COL25A1-206ENST00000505591 MYT1Q01538 1121 aa18.42■□□□□ 0.54
COL25A1-206ENST00000505591 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
COL25A1-206ENST00000505591 BTG4Q9NY30 223 aa18.41■□□□□ 0.54
COL25A1-206ENST00000505591 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
COL25A1-206ENST00000505591 BAG6P46379 1132 aa18.4■□□□□ 0.54
COL25A1-206ENST00000505591 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
COL25A1-206ENST00000505591 FAM98CQ17RN3 349 aaKnown RBP18.39■□□□□ 0.53
COL25A1-206ENST00000505591 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
COL25A1-206ENST00000505591 TRPM3Q9HCF6 1732 aaPredicted RBP18.39■□□□□ 0.53
COL25A1-206ENST00000505591 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
COL25A1-206ENST00000505591 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
COL25A1-206ENST00000505591 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
COL25A1-206ENST00000505591 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
COL25A1-206ENST00000505591 NGDNQ8NEJ9 315 aaKnown RBP18.37■□□□□ 0.53
COL25A1-206ENST00000505591 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms