RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 PRDM9Q9NQV7 894 aa9.68□□□□□ -0.86
SMN2-205ENST00000505346 GCGRP47871 477 aa9.67□□□□□ -0.86
SMN2-205ENST00000505346 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
SMN2-205ENST00000505346 KIFC2Q96AC6 838 aa9.67□□□□□ -0.86
SMN2-205ENST00000505346 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
SMN2-205ENST00000505346 MSS51Q4VC12 460 aa9.66□□□□□ -0.86
SMN2-205ENST00000505346 MRGPRX2Q96LB1 330 aa9.66□□□□□ -0.86
SMN2-205ENST00000505346 TRIM32Q13049 653 aa9.65□□□□□ -0.86
SMN2-205ENST00000505346 J3QL48 77 aa9.64□□□□□ -0.87
SMN2-205ENST00000505346 SEMA3EO15041 775 aa9.64□□□□□ -0.87
SMN2-205ENST00000505346 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
SMN2-205ENST00000505346 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
SMN2-205ENST00000505346 REPIN1Q9BWE0 567 aaKnown RBP9.64□□□□□ -0.87
SMN2-205ENST00000505346 GNPATO15228 680 aa9.62□□□□□ -0.87
SMN2-205ENST00000505346 Q3C1V9 767 aa9.62□□□□□ -0.87
SMN2-205ENST00000505346 TSHZ2Q9NRE2 1034 aa9.62□□□□□ -0.87
SMN2-205ENST00000505346 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
SMN2-205ENST00000505346 HPS1Q92902 700 aa9.61□□□□□ -0.87
SMN2-205ENST00000505346 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
SMN2-205ENST00000505346 SMYD5Q6GMV2 418 aa9.59□□□□□ -0.87
SMN2-205ENST00000505346 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
SMN2-205ENST00000505346 MMP16P51512 607 aa9.58□□□□□ -0.88
SMN2-205ENST00000505346 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
SMN2-205ENST00000505346 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
SMN2-205ENST00000505346 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
SMN2-205ENST00000505346 NXF1Q9UBU9 619 aaKnown RBP9.56□□□□□ -0.88
SMN2-205ENST00000505346 USB1Q9BQ65 265 aaKnown RBP9.55□□□□□ -0.88
SMN2-205ENST00000505346 WNT7BP56706 349 aa9.54□□□□□ -0.88
SMN2-205ENST00000505346 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
SMN2-205ENST00000505346 IRF7Q92985 503 aa9.53□□□□□ -0.88
SMN2-205ENST00000505346 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
SMN2-205ENST00000505346 ALDH1A1P00352 501 aa9.52□□□□□ -0.89
SMN2-205ENST00000505346 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
SMN2-205ENST00000505346 GMPRP36959 345 aa9.51□□□□□ -0.89
SMN2-205ENST00000505346 PHOX2BQ99453 314 aa9.51□□□□□ -0.89
SMN2-205ENST00000505346 TESPA1A2RU30 521 aaPredicted RBP9.5□□□□□ -0.89
SMN2-205ENST00000505346 SKOR1P84550 965 aa9.49□□□□□ -0.89
SMN2-205ENST00000505346 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
SMN2-205ENST00000505346 KDM4AO75164 1064 aa9.48□□□□□ -0.89
SMN2-205ENST00000505346 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
SMN2-205ENST00000505346 GPR37O15354 613 aa9.47□□□□□ -0.89
SMN2-205ENST00000505346 CAPN5O15484 640 aaPredicted RBP9.47□□□□□ -0.89
SMN2-205ENST00000505346 WASF2Q9Y6W5 498 aa9.47□□□□□ -0.89
SMN2-205ENST00000505346 CD46P15529 392 aa9.45□□□□□ -0.9
SMN2-205ENST00000505346 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
SMN2-205ENST00000505346 BMP1P13497 986 aa9.44□□□□□ -0.9
SMN2-205ENST00000505346 VEGFBP49765 207 aa9.44□□□□□ -0.9
SMN2-205ENST00000505346 USP46P62068 366 aa9.44□□□□□ -0.9
SMN2-205ENST00000505346 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
SMN2-205ENST00000505346 H3BM21 787 aa9.42□□□□□ -0.9
SMN2-205ENST00000505346 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
SMN2-205ENST00000505346 SIAH2O43255 324 aa9.41□□□□□ -0.9
SMN2-205ENST00000505346 JUNDP17535 347 aa9.4□□□□□ -0.9
SMN2-205ENST00000505346 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
SMN2-205ENST00000505346 HLA-CQ95604 372 aa9.39□□□□□ -0.91
SMN2-205ENST00000505346 ZFP42Q96MM3 310 aa9.38□□□□□ -0.91
SMN2-205ENST00000505346 NUDT12Q9BQG2 462 aa9.38□□□□□ -0.91
SMN2-205ENST00000505346 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
SMN2-205ENST00000505346 HOXA2O43364 376 aa9.37□□□□□ -0.91
SMN2-205ENST00000505346 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
SMN2-205ENST00000505346 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
SMN2-205ENST00000505346 SCARF1Q14162 830 aa9.34□□□□□ -0.91
SMN2-205ENST00000505346 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
SMN2-205ENST00000505346 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
SMN2-205ENST00000505346 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
SMN2-205ENST00000505346 SH3BP2P78314 561 aa9.33□□□□□ -0.92
SMN2-205ENST00000505346 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
SMN2-205ENST00000505346 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
SMN2-205ENST00000505346 MAP2K5Q13163 448 aa9.31□□□□□ -0.92
SMN2-205ENST00000505346 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
SMN2-205ENST00000505346 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
SMN2-205ENST00000505346 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
SMN2-205ENST00000505346 MS4A1P11836 297 aa9.3□□□□□ -0.92
SMN2-205ENST00000505346 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
SMN2-205ENST00000505346 IRF6O14896 467 aa9.29□□□□□ -0.92
SMN2-205ENST00000505346 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
SMN2-205ENST00000505346 NNTQ13423 1086 aa9.28□□□□□ -0.92
SMN2-205ENST00000505346 PURBQ96QR8 312 aaKnown RBP9.28□□□□□ -0.92
SMN2-205ENST00000505346 VSIG8P0DPA2 414 aa9.27□□□□□ -0.93
SMN2-205ENST00000505346 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
SMN2-205ENST00000505346 BAP1Q92560 729 aa9.27□□□□□ -0.93
SMN2-205ENST00000505346 UNC93B1Q9H1C4 597 aa9.27□□□□□ -0.93
SMN2-205ENST00000505346 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
SMN2-205ENST00000505346 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
SMN2-205ENST00000505346 LINC01559Q495D7 138 aa9.26□□□□□ -0.93
SMN2-205ENST00000505346 MPNDQ8N594 471 aa9.26□□□□□ -0.93
SMN2-205ENST00000505346 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
SMN2-205ENST00000505346 ADH1CP00326 375 aa9.25□□□□□ -0.93
SMN2-205ENST00000505346 FDX1P10109 184 aa9.25□□□□□ -0.93
SMN2-205ENST00000505346 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
SMN2-205ENST00000505346 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
SMN2-205ENST00000505346 PTPRNQ16849 979 aa9.25□□□□□ -0.93
SMN2-205ENST00000505346 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
SMN2-205ENST00000505346 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
SMN2-205ENST00000505346 CLCN1P35523 988 aa9.24□□□□□ -0.93
SMN2-205ENST00000505346 GPCPD1Q9NPB8 672 aa9.24□□□□□ -0.93
SMN2-205ENST00000505346 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
SMN2-205ENST00000505346 MAN1A2O60476 641 aa9.23□□□□□ -0.93
SMN2-205ENST00000505346 TIMP2P16035 220 aa9.23□□□□□ -0.93
SMN2-205ENST00000505346 KCNH2Q12809 1159 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms