RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GJD4Q96KN9 370 aaPredicted RBP24.3■■□□□ 1.48
PDLIM7-213ENST00000505074 MYOM2P54296 1465 aa24.3■■□□□ 1.48
PDLIM7-213ENST00000505074 CLTCL1P53675 1640 aa24.28■■□□□ 1.48
PDLIM7-213ENST00000505074 ROBO2Q9HCK4 1378 aa24.28■■□□□ 1.48
PDLIM7-213ENST00000505074 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
PDLIM7-213ENST00000505074 NPHP3Q7Z494 1330 aa24.27■■□□□ 1.48
PDLIM7-213ENST00000505074 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
PDLIM7-213ENST00000505074 ESCO1Q5FWF5 840 aa24.23■■□□□ 1.47
PDLIM7-213ENST00000505074 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
PDLIM7-213ENST00000505074 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
PDLIM7-213ENST00000505074 PXDNQ92626 1479 aa24.22■■□□□ 1.47
PDLIM7-213ENST00000505074 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
PDLIM7-213ENST00000505074 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
PDLIM7-213ENST00000505074 SF3B2Q13435 895 aaKnown RBP24.21■■□□□ 1.47
PDLIM7-213ENST00000505074 LRP5O75197 1615 aa24.21■■□□□ 1.47
PDLIM7-213ENST00000505074 GLI3P10071 1580 aa24.2■■□□□ 1.46
PDLIM7-213ENST00000505074 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
PDLIM7-213ENST00000505074 UNC5CLQ8IV45 518 aa24.19■■□□□ 1.46
PDLIM7-213ENST00000505074 CDC42BPGQ6DT37 1551 aa24.19■■□□□ 1.46
PDLIM7-213ENST00000505074 RALGAPBQ86X10 1494 aa24.19■■□□□ 1.46
PDLIM7-213ENST00000505074 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
PDLIM7-213ENST00000505074 FOXO3O43524 673 aa24.18■■□□□ 1.46
PDLIM7-213ENST00000505074 DEFB132Q7Z7B7 95 aa24.18■■□□□ 1.46
PDLIM7-213ENST00000505074 XPCQ01831 940 aaPredicted RBP24.17■■□□□ 1.46
PDLIM7-213ENST00000505074 SLIT2O94813 1529 aa24.15■■□□□ 1.46
PDLIM7-213ENST00000505074 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
PDLIM7-213ENST00000505074 PPLO60437 1756 aa24.11■■□□□ 1.45
PDLIM7-213ENST00000505074 NAIPQ13075 1403 aa24.11■■□□□ 1.45
PDLIM7-213ENST00000505074 SEPT12Q8IYM1 358 aa24.1■■□□□ 1.45
PDLIM7-213ENST00000505074 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
PDLIM7-213ENST00000505074 NUTM2FA1L443 756 aa24.07■■□□□ 1.44
PDLIM7-213ENST00000505074 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
PDLIM7-213ENST00000505074 KIF1AQ12756 1690 aa24.06■■□□□ 1.44
PDLIM7-213ENST00000505074 NWD2Q9ULI1 1742 aa24.05■■□□□ 1.44
PDLIM7-213ENST00000505074 HAP1P54257 671 aaPredicted RBP24.05■■□□□ 1.44
PDLIM7-213ENST00000505074 VPS72Q15906 364 aa24.04■■□□□ 1.44
PDLIM7-213ENST00000505074 KRT27Q7Z3Y8 459 aa24.04■■□□□ 1.44
PDLIM7-213ENST00000505074 PLCH1Q4KWH8 1693 aa24.04■■□□□ 1.44
PDLIM7-213ENST00000505074 CCDC144AA2RUR9 1427 aa24.03■■□□□ 1.44
PDLIM7-213ENST00000505074 PSDA5PKW4 1024 aaPredicted RBP24.03■■□□□ 1.44
PDLIM7-213ENST00000505074 CCDC9Q9Y3X0 531 aaKnown RBP24.03■■□□□ 1.44
PDLIM7-213ENST00000505074 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
PDLIM7-213ENST00000505074 ONECUT3O60422 494 aaPredicted RBP24.02■■□□□ 1.44
PDLIM7-213ENST00000505074 BAG6P46379 1132 aa24.02■■□□□ 1.44
PDLIM7-213ENST00000505074 HRCP23327 699 aa24.01■■□□□ 1.43
PDLIM7-213ENST00000505074 KRT28Q7Z3Y7 464 aa24.01■■□□□ 1.43
PDLIM7-213ENST00000505074 WAPLQ7Z5K2 1190 aa24■■□□□ 1.43
PDLIM7-213ENST00000505074 STK26Q9P289 416 aa24■■□□□ 1.43
PDLIM7-213ENST00000505074 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
PDLIM7-213ENST00000505074 TECPR2O15040 1411 aa23.98■■□□□ 1.43
PDLIM7-213ENST00000505074 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
PDLIM7-213ENST00000505074 RGPD8O14715 1765 aaPredicted RBP23.96■■□□□ 1.43
PDLIM7-213ENST00000505074 TNS3Q68CZ2 1445 aa23.96■■□□□ 1.43
PDLIM7-213ENST00000505074 A0A0G2JS52 829 aa23.96■■□□□ 1.43
PDLIM7-213ENST00000505074 MYT1Q01538 1121 aa23.96■■□□□ 1.43
PDLIM7-213ENST00000505074 PSME1Q06323 249 aa23.96■■□□□ 1.43
PDLIM7-213ENST00000505074 CABLES1Q8TDN4 633 aa23.95■■□□□ 1.42
PDLIM7-213ENST00000505074 ABCA3Q99758 1704 aa23.95■■□□□ 1.42
PDLIM7-213ENST00000505074 RGPD1P0DJD0 1748 aa23.94■■□□□ 1.42
PDLIM7-213ENST00000505074 PLEKHG5O94827 1062 aa23.93■■□□□ 1.42
PDLIM7-213ENST00000505074 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
PDLIM7-213ENST00000505074 ABCC11Q96J66 1382 aa23.92■■□□□ 1.42
PDLIM7-213ENST00000505074 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
PDLIM7-213ENST00000505074 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
PDLIM7-213ENST00000505074 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
PDLIM7-213ENST00000505074 PHF8Q9UPP1 1060 aa23.9■■□□□ 1.42
PDLIM7-213ENST00000505074 EN1Q05925 392 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-213ENST00000505074 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
PDLIM7-213ENST00000505074 ARHGEF10O15013 1369 aa23.89■■□□□ 1.41
PDLIM7-213ENST00000505074 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
PDLIM7-213ENST00000505074 FAM98CQ17RN3 349 aaKnown RBP23.88■■□□□ 1.41
PDLIM7-213ENST00000505074 TMEM132EQ6IEE7 984 aa23.88■■□□□ 1.41
PDLIM7-213ENST00000505074 FAM83GA6ND36 823 aa23.87■■□□□ 1.41
PDLIM7-213ENST00000505074 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-213ENST00000505074 ANKRD30BQ9BXX2 1392 aa23.85■■□□□ 1.41
PDLIM7-213ENST00000505074 NRXN1Q9ULB1 1477 aa23.85■■□□□ 1.41
PDLIM7-213ENST00000505074 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
PDLIM7-213ENST00000505074 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
PDLIM7-213ENST00000505074 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
PDLIM7-213ENST00000505074 SIRT1Q96EB6 747 aa23.82■■□□□ 1.4
PDLIM7-213ENST00000505074 BTG4Q9NY30 223 aa23.82■■□□□ 1.4
PDLIM7-213ENST00000505074 COL14A1Q05707 1796 aaKnown RBP23.81■■□□□ 1.4
PDLIM7-213ENST00000505074 DISP2A7MBM2 1401 aa23.81■■□□□ 1.4
PDLIM7-213ENST00000505074 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
PDLIM7-213ENST00000505074 FAM182BQ5T319 152 aa23.79■■□□□ 1.4
PDLIM7-213ENST00000505074 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
PDLIM7-213ENST00000505074 EZH2Q15910 746 aaKnown RBP23.76■■□□□ 1.39
PDLIM7-213ENST00000505074 MPHOSPH9Q99550 1183 aa23.76■■□□□ 1.39
PDLIM7-213ENST00000505074 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
PDLIM7-213ENST00000505074 YY1P25490 414 aa23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 THSD7AQ9UPZ6 1657 aa23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 SPATA31A5Q5VU36 1347 aa23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 SPATA31A7Q8IWB4 1347 aa23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
PDLIM7-213ENST00000505074 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
PDLIM7-213ENST00000505074 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
PDLIM7-213ENST00000505074 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
PDLIM7-213ENST00000505074 SAFB2Q14151 953 aaKnown RBP eCLIP23.7■■□□□ 1.38
PDLIM7-213ENST00000505074 CAMKK2Q96RR4 588 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms