RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 AMOTL2Q9Y2J4 779 aa10.65□□□□□ -0.7
ITGA3-203ENST00000504417 ADGRB2O60241 1585 aa10.65□□□□□ -0.71
ITGA3-203ENST00000504417 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
ITGA3-203ENST00000504417 DLC1Q96QB1 1528 aa10.63□□□□□ -0.71
ITGA3-203ENST00000504417 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
ITGA3-203ENST00000504417 MARF1Q9Y4F3 1742 aaKnown RBP10.62□□□□□ -0.71
ITGA3-203ENST00000504417 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
ITGA3-203ENST00000504417 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
ITGA3-203ENST00000504417 COL22A1Q8NFW1 1626 aaPredicted RBP10.62□□□□□ -0.71
ITGA3-203ENST00000504417 BCANQ96GW7 911 aa10.61□□□□□ -0.71
ITGA3-203ENST00000504417 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
ITGA3-203ENST00000504417 KIF1AQ12756 1690 aa10.6□□□□□ -0.71
ITGA3-203ENST00000504417 LRP6O75581 1613 aa10.6□□□□□ -0.71
ITGA3-203ENST00000504417 C19orf44Q9H6X5 657 aa10.6□□□□□ -0.71
ITGA3-203ENST00000504417 C1orf167Q5SNV9 1468 aa10.6□□□□□ -0.71
ITGA3-203ENST00000504417 YTHDC2Q9H6S0 1430 aaKnown RBP10.59□□□□□ -0.71
ITGA3-203ENST00000504417 ABCA3Q99758 1704 aa10.59□□□□□ -0.71
ITGA3-203ENST00000504417 SLAIN2Q9P270 581 aa10.59□□□□□ -0.71
ITGA3-203ENST00000504417 ABCC11Q96J66 1382 aa10.59□□□□□ -0.71
ITGA3-203ENST00000504417 DISP3Q9P2K9 1392 aa10.59□□□□□ -0.71
ITGA3-203ENST00000504417 TOPAZ1Q8N9V7 1692 aa10.58□□□□□ -0.72
ITGA3-203ENST00000504417 ILDR2Q71H61 639 aa10.58□□□□□ -0.72
ITGA3-203ENST00000504417 TRPM1Q7Z4N2 1603 aa10.58□□□□□ -0.72
ITGA3-203ENST00000504417 PLEKHH1Q9ULM0 1364 aa10.57□□□□□ -0.72
ITGA3-203ENST00000504417 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
ITGA3-203ENST00000504417 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
ITGA3-203ENST00000504417 CRYBG1Q9Y4K1 1723 aa10.57□□□□□ -0.72
ITGA3-203ENST00000504417 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
ITGA3-203ENST00000504417 RGL3Q3MIN7 710 aa10.56□□□□□ -0.72
ITGA3-203ENST00000504417 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
ITGA3-203ENST00000504417 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
ITGA3-203ENST00000504417 PXDNQ92626 1479 aa10.55□□□□□ -0.72
ITGA3-203ENST00000504417 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
ITGA3-203ENST00000504417 JCADQ9P266 1359 aa10.54□□□□□ -0.72
ITGA3-203ENST00000504417 ALS2Q96Q42 1657 aa10.53□□□□□ -0.72
ITGA3-203ENST00000504417 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
ITGA3-203ENST00000504417 ATF3P18847 181 aa10.52□□□□□ -0.73
ITGA3-203ENST00000504417 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
ITGA3-203ENST00000504417 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
ITGA3-203ENST00000504417 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
ITGA3-203ENST00000504417 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.52□□□□□ -0.73
ITGA3-203ENST00000504417 TMEM132EQ6IEE7 984 aa10.51□□□□□ -0.73
ITGA3-203ENST00000504417 PNPLA6Q8IY17 1366 aa10.51□□□□□ -0.73
ITGA3-203ENST00000504417 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
ITGA3-203ENST00000504417 WAPLQ7Z5K2 1190 aa10.49□□□□□ -0.73
ITGA3-203ENST00000504417 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
ITGA3-203ENST00000504417 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
ITGA3-203ENST00000504417 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
ITGA3-203ENST00000504417 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
ITGA3-203ENST00000504417 SPATA31A6Q5VVP1 1343 aa10.48□□□□□ -0.73
ITGA3-203ENST00000504417 ANKARQ7Z5J8 1434 aa10.48□□□□□ -0.73
ITGA3-203ENST00000504417 ATP7BP35670 1465 aa10.48□□□□□ -0.73
ITGA3-203ENST00000504417 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
ITGA3-203ENST00000504417 PLCH1Q4KWH8 1693 aa10.47□□□□□ -0.73
ITGA3-203ENST00000504417 ORAI2Q96SN7 254 aa10.46□□□□□ -0.73
ITGA3-203ENST00000504417 STK26Q9P289 416 aa10.46□□□□□ -0.73
ITGA3-203ENST00000504417 NRAPQ86VF7 1730 aa10.46□□□□□ -0.74
ITGA3-203ENST00000504417 AKAP12Q02952 1782 aa10.46□□□□□ -0.74
ITGA3-203ENST00000504417 NWD2Q9ULI1 1742 aa10.45□□□□□ -0.74
ITGA3-203ENST00000504417 PHRF1Q9P1Y6 1649 aaKnown RBP10.45□□□□□ -0.74
ITGA3-203ENST00000504417 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
ITGA3-203ENST00000504417 PRR36Q9H6K5 1346 aa10.43□□□□□ -0.74
ITGA3-203ENST00000504417 SOCS7O14512 581 aa10.43□□□□□ -0.74
ITGA3-203ENST00000504417 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
ITGA3-203ENST00000504417 PRAM1Q96QH2 718 aa10.43□□□□□ -0.74
ITGA3-203ENST00000504417 NRKQ7Z2Y5 1582 aa10.43□□□□□ -0.74
ITGA3-203ENST00000504417 GPRASP1Q5JY77 1395 aa10.42□□□□□ -0.74
ITGA3-203ENST00000504417 POTEAQ6S8J7 498 aa10.42□□□□□ -0.74
ITGA3-203ENST00000504417 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
ITGA3-203ENST00000504417 NPHP3Q7Z494 1330 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 FKBP8Q14318 412 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
ITGA3-203ENST00000504417 BRWD3Q6RI45 1802 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 RALGAPBQ86X10 1494 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
ITGA3-203ENST00000504417 NBPF1Q3BBV0 1214 aa10.4□□□□□ -0.74
ITGA3-203ENST00000504417 LRRC59Q96AG4 307 aaKnown RBP10.4□□□□□ -0.74
ITGA3-203ENST00000504417 SIN3AQ96ST3 1273 aa10.4□□□□□ -0.74
ITGA3-203ENST00000504417 TRAK1Q9UPV9 953 aa10.4□□□□□ -0.74
ITGA3-203ENST00000504417 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
ITGA3-203ENST00000504417 SBNO1A3KN83 1393 aa10.39□□□□□ -0.75
ITGA3-203ENST00000504417 EP400Q96L91 3159 aa10.39□□□□□ -0.75
ITGA3-203ENST00000504417 L3MBTL2Q969R5 705 aa10.39□□□□□ -0.75
ITGA3-203ENST00000504417 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
ITGA3-203ENST00000504417 GLI3P10071 1580 aa10.38□□□□□ -0.75
ITGA3-203ENST00000504417 SLIT2O94813 1529 aa10.38□□□□□ -0.75
ITGA3-203ENST00000504417 PIK3C2AO00443 1686 aa10.38□□□□□ -0.75
ITGA3-203ENST00000504417 SPATA31A3Q5VYP0 1347 aa10.37□□□□□ -0.75
ITGA3-203ENST00000504417 COL14A1Q05707 1796 aaKnown RBP10.37□□□□□ -0.75
ITGA3-203ENST00000504417 ATRNO75882 1429 aa10.37□□□□□ -0.75
ITGA3-203ENST00000504417 TRIM26Q12899 539 aaPredicted RBP10.37□□□□□ -0.75
ITGA3-203ENST00000504417 SAFB2Q14151 953 aaKnown RBP eCLIP10.37□□□□□ -0.75
ITGA3-203ENST00000504417 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
ITGA3-203ENST00000504417 POLR3AO14802 1390 aaPredicted RBP10.37□□□□□ -0.75
ITGA3-203ENST00000504417 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
ITGA3-203ENST00000504417 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
ITGA3-203ENST00000504417 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
ITGA3-203ENST00000504417 FOXO3O43524 673 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms