RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
PDLIM7-211ENST00000504318 POTEAQ6S8J7 498 aa20.68■□□□□ 0.9
PDLIM7-211ENST00000504318 CFAP70Q5T0N1 1121 aa20.67■□□□□ 0.9
PDLIM7-211ENST00000504318 WAPLQ7Z5K2 1190 aa20.67■□□□□ 0.9
PDLIM7-211ENST00000504318 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-211ENST00000504318 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
PDLIM7-211ENST00000504318 ORAI2Q96SN7 254 aa20.66■□□□□ 0.9
PDLIM7-211ENST00000504318 DLC1Q96QB1 1528 aa20.65■□□□□ 0.9
PDLIM7-211ENST00000504318 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
PDLIM7-211ENST00000504318 PNPLA6Q8IY17 1366 aa20.64■□□□□ 0.89
PDLIM7-211ENST00000504318 SOS2Q07890 1332 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-211ENST00000504318 STK26Q9P289 416 aa20.64■□□□□ 0.89
PDLIM7-211ENST00000504318 PXDNQ92626 1479 aa20.61■□□□□ 0.89
PDLIM7-211ENST00000504318 COL22A1Q8NFW1 1626 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-211ENST00000504318 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-211ENST00000504318 RGPD8O14715 1765 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-211ENST00000504318 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
PDLIM7-211ENST00000504318 USP32Q8NFA0 1604 aa20.56■□□□□ 0.88
PDLIM7-211ENST00000504318 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
PDLIM7-211ENST00000504318 KIF1AQ12756 1690 aa20.54■□□□□ 0.88
PDLIM7-211ENST00000504318 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-211ENST00000504318 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
PDLIM7-211ENST00000504318 KIAA1210Q9ULL0 1709 aa20.53■□□□□ 0.88
PDLIM7-211ENST00000504318 ESCO1Q5FWF5 840 aa20.52■□□□□ 0.88
PDLIM7-211ENST00000504318 PRAM1Q96QH2 718 aa20.52■□□□□ 0.88
PDLIM7-211ENST00000504318 KDM2AQ9Y2K7 1162 aa20.51■□□□□ 0.87
PDLIM7-211ENST00000504318 NPHP3Q7Z494 1330 aa20.51■□□□□ 0.87
PDLIM7-211ENST00000504318 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-211ENST00000504318 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-211ENST00000504318 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-211ENST00000504318 NUTM2FA1L443 756 aa20.49■□□□□ 0.87
PDLIM7-211ENST00000504318 FOXO3O43524 673 aa20.48■□□□□ 0.87
PDLIM7-211ENST00000504318 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-211ENST00000504318 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-211ENST00000504318 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-211ENST00000504318 TRAK1Q9UPV9 953 aa20.47■□□□□ 0.87
PDLIM7-211ENST00000504318 ANKARQ7Z5J8 1434 aa20.46■□□□□ 0.87
PDLIM7-211ENST00000504318 SAFB2Q14151 953 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM7-211ENST00000504318 AFF2P51816 1311 aa20.46■□□□□ 0.87
PDLIM7-211ENST00000504318 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-211ENST00000504318 TULP4Q9NRJ4 1543 aa20.43■□□□□ 0.86
PDLIM7-211ENST00000504318 TRPM3Q9HCF6 1732 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-211ENST00000504318 PRR36Q9H6K5 1346 aa20.43■□□□□ 0.86
PDLIM7-211ENST00000504318 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-211ENST00000504318 SPATA31A3Q5VYP0 1347 aa20.42■□□□□ 0.86
PDLIM7-211ENST00000504318 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
PDLIM7-211ENST00000504318 PHF8Q9UPP1 1060 aa20.41■□□□□ 0.86
PDLIM7-211ENST00000504318 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
PDLIM7-211ENST00000504318 POGKQ9P215 609 aa20.4■□□□□ 0.86
PDLIM7-211ENST00000504318 TNS3Q68CZ2 1445 aa20.39■□□□□ 0.85
PDLIM7-211ENST00000504318 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
PDLIM7-211ENST00000504318 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-211ENST00000504318 ATP7BP35670 1465 aa20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 SBNO1A3KN83 1393 aa20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 MINK1Q8N4C8 1332 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 ADAMTS2O95450 1211 aa20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 ALS2Q96Q42 1657 aa20.38■□□□□ 0.85
PDLIM7-211ENST00000504318 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
PDLIM7-211ENST00000504318 WASLO00401 505 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-211ENST00000504318 KRT28Q7Z3Y7 464 aa20.37■□□□□ 0.85
PDLIM7-211ENST00000504318 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
PDLIM7-211ENST00000504318 SIN3AQ96ST3 1273 aa20.36■□□□□ 0.85
PDLIM7-211ENST00000504318 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-211ENST00000504318 RGS12O14924 1447 aa20.36■□□□□ 0.85
PDLIM7-211ENST00000504318 ATRNO75882 1429 aa20.36■□□□□ 0.85
PDLIM7-211ENST00000504318 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
PDLIM7-211ENST00000504318 RXRBP28702 533 aa20.35■□□□□ 0.85
PDLIM7-211ENST00000504318 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
PDLIM7-211ENST00000504318 CRYBG1Q9Y4K1 1723 aa20.35■□□□□ 0.85
PDLIM7-211ENST00000504318 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
PDLIM7-211ENST00000504318 SLIT2O94813 1529 aa20.33■□□□□ 0.85
PDLIM7-211ENST00000504318 QTRT2Q9H974 415 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-211ENST00000504318 EIF3AQ14152 1382 aaKnown RBP20.33■□□□□ 0.84
PDLIM7-211ENST00000504318 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
PDLIM7-211ENST00000504318 NGLY1Q96IV0 654 aa20.32■□□□□ 0.84
PDLIM7-211ENST00000504318 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-211ENST00000504318 USP21Q9UK80 565 aa20.3■□□□□ 0.84
PDLIM7-211ENST00000504318 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
PDLIM7-211ENST00000504318 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
PDLIM7-211ENST00000504318 ARHGEF10O15013 1369 aa20.27■□□□□ 0.84
PDLIM7-211ENST00000504318 PSME1Q06323 249 aa20.27■□□□□ 0.84
PDLIM7-211ENST00000504318 GLI3P10071 1580 aa20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 CABLES1Q8TDN4 633 aa20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 NUDT16Q96DE0 195 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 NWD2Q9ULI1 1742 aa20.26■□□□□ 0.83
PDLIM7-211ENST00000504318 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDLIM7-211ENST00000504318 CDK19Q9BWU1 502 aa20.25■□□□□ 0.83
PDLIM7-211ENST00000504318 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
PDLIM7-211ENST00000504318 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
PDLIM7-211ENST00000504318 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
PDLIM7-211ENST00000504318 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-211ENST00000504318 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
PDLIM7-211ENST00000504318 RALGAPBQ86X10 1494 aa20.2■□□□□ 0.82
PDLIM7-211ENST00000504318 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
PDLIM7-211ENST00000504318 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
PDLIM7-211ENST00000504318 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-211ENST00000504318 GJD4Q96KN9 370 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms