RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 SPATA31E1Q6ZUB1 1445 aa34.26■■■■□ 3.07
SSBP2-203ENST00000504174 ADAMTS2O95450 1211 aa34.25■■■■□ 3.07
SSBP2-203ENST00000504174 NGLY1Q96IV0 654 aa34.25■■■■□ 3.07
SSBP2-203ENST00000504174 QTRT2Q9H974 415 aaKnown RBP34.25■■■■□ 3.07
SSBP2-203ENST00000504174 ACIN1Q9UKV3 1341 aaKnown RBP34.24■■■■□ 3.07
SSBP2-203ENST00000504174 RBM6P78332 1123 aaKnown RBP34.22■■■■□ 3.07
SSBP2-203ENST00000504174 ESCO1Q5FWF5 840 aa34.22■■■■□ 3.07
SSBP2-203ENST00000504174 STK26Q9P289 416 aa34.22■■■■□ 3.07
SSBP2-203ENST00000504174 NPHP3Q7Z494 1330 aa34.2■■■■□ 3.07
SSBP2-203ENST00000504174 LRPPRCP42704 1394 aaKnown RBP34.2■■■■□ 3.07
SSBP2-203ENST00000504174 TECPR2O15040 1411 aa34.19■■■■□ 3.06
SSBP2-203ENST00000504174 KNDC1Q76NI1 1749 aa34.17■■■■□ 3.06
SSBP2-203ENST00000504174 COL22A1Q8NFW1 1626 aaPredicted RBP34.17■■■■□ 3.06
SSBP2-203ENST00000504174 PIK3C2GO75747 1445 aa34.15■■■■□ 3.06
SSBP2-203ENST00000504174 ABCC11Q96J66 1382 aa34.15■■■■□ 3.06
SSBP2-203ENST00000504174 WAPLQ7Z5K2 1190 aa34.15■■■■□ 3.06
SSBP2-203ENST00000504174 RGS12O14924 1447 aa34.14■■■■□ 3.06
SSBP2-203ENST00000504174 TMEM132EQ6IEE7 984 aa34.13■■■■□ 3.05
SSBP2-203ENST00000504174 USP21Q9UK80 565 aa34.13■■■■□ 3.05
SSBP2-203ENST00000504174 PXDNQ92626 1479 aa34.1■■■■□ 3.05
SSBP2-203ENST00000504174 FOXO3O43524 673 aa34.1■■■■□ 3.05
SSBP2-203ENST00000504174 NUTM2FA1L443 756 aa34.09■■■■□ 3.05
SSBP2-203ENST00000504174 TRPC5Q9UL62 973 aaPredicted RBP34.09■■■■□ 3.05
SSBP2-203ENST00000504174 YTHDC2Q9H6S0 1430 aaKnown RBP34.09■■■■□ 3.05
SSBP2-203ENST00000504174 FNBP4Q8N3X1 1017 aaPredicted RBP34.06■■■■□ 3.04
SSBP2-203ENST00000504174 PLEKHH1Q9ULM0 1364 aa34.06■■■■□ 3.04
SSBP2-203ENST00000504174 MYOM2P54296 1465 aa34.06■■■■□ 3.04
SSBP2-203ENST00000504174 FMN2Q9NZ56 1722 aa34.05■■■■□ 3.04
SSBP2-203ENST00000504174 XPCQ01831 940 aaPredicted RBP34.05■■■■□ 3.04
SSBP2-203ENST00000504174 SIRT1Q96EB6 747 aa34.03■■■■□ 3.04
SSBP2-203ENST00000504174 MARF1Q9Y4F3 1742 aaKnown RBP34.03■■■■□ 3.04
SSBP2-203ENST00000504174 KIF1AQ12756 1690 aa34.03■■■■□ 3.04
SSBP2-203ENST00000504174 C14orf93Q9H972 538 aaKnown RBP34.02■■■■□ 3.04
SSBP2-203ENST00000504174 DHX57Q6P158 1386 aaKnown RBP34.01■■■■□ 3.04
SSBP2-203ENST00000504174 NRXN1Q9ULB1 1477 aa33.99■■■■□ 3.03
SSBP2-203ENST00000504174 ATRNO75882 1429 aa33.98■■■■□ 3.03
SSBP2-203ENST00000504174 ATAD2Q6PL18 1390 aa33.97■■■■□ 3.03
SSBP2-203ENST00000504174 CFAP70Q5T0N1 1121 aa33.96■■■■□ 3.03
SSBP2-203ENST00000504174 RAB3GAP2Q9H2M9 1393 aa33.93■■■■□ 3.02
SSBP2-203ENST00000504174 SPATA31A3Q5VYP0 1347 aa33.92■■■■□ 3.02
SSBP2-203ENST00000504174 BCL9LQ86UU0 1499 aa33.91■■■■□ 3.02
SSBP2-203ENST00000504174 KRT28Q7Z3Y7 464 aa33.91■■■■□ 3.02
SSBP2-203ENST00000504174 RGPD8O14715 1765 aaPredicted RBP33.9■■■■□ 3.02
SSBP2-203ENST00000504174 PHF8Q9UPP1 1060 aa33.89■■■■□ 3.02
SSBP2-203ENST00000504174 PSME1Q06323 249 aa33.88■■■■□ 3.01
SSBP2-203ENST00000504174 PRAM1Q96QH2 718 aa33.88■■■■□ 3.01
SSBP2-203ENST00000504174 SAFB2Q14151 953 aaKnown RBP eCLIP33.87■■■■□ 3.01
SSBP2-203ENST00000504174 POGKQ9P215 609 aa33.86■■■■□ 3.01
SSBP2-203ENST00000504174 DLC1Q96QB1 1528 aa33.85■■■■□ 3.01
SSBP2-203ENST00000504174 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.85■■■■□ 3.01
SSBP2-203ENST00000504174 HAP1P54257 671 aaPredicted RBP33.84■■■■□ 3.01
SSBP2-203ENST00000504174 GJD4Q96KN9 370 aaPredicted RBP33.84■■■■□ 3.01
SSBP2-203ENST00000504174 TNS3Q68CZ2 1445 aa33.82■■■■□ 3
SSBP2-203ENST00000504174 USP32Q8NFA0 1604 aa33.82■■■■□ 3
SSBP2-203ENST00000504174 UNC5CLQ8IV45 518 aa33.8■■■■□ 3
SSBP2-203ENST00000504174 SLIT2O94813 1529 aa33.79■■■■□ 3
SSBP2-203ENST00000504174 SBNO1A3KN83 1393 aa33.78■■■■□ 3
SSBP2-203ENST00000504174 ANKARQ7Z5J8 1434 aa33.78■■■■□ 3
SSBP2-203ENST00000504174 ADGRB2O60241 1585 aa33.77■■■■□ 3
SSBP2-203ENST00000504174 LMOD2Q6P5Q4 547 aa33.76■■■□□ 2.99
SSBP2-203ENST00000504174 ADGRB1O14514 1584 aa33.76■■■□□ 2.99
SSBP2-203ENST00000504174 ARHGEF10O15013 1369 aa33.75■■■□□ 2.99
SSBP2-203ENST00000504174 TRAK1Q9UPV9 953 aa33.75■■■□□ 2.99
SSBP2-203ENST00000504174 KDM2AQ9Y2K7 1162 aa33.74■■■□□ 2.99
SSBP2-203ENST00000504174 CCDC125Q86Z20 511 aa33.73■■■□□ 2.99
SSBP2-203ENST00000504174 DCAF11Q8TEB1 546 aa33.73■■■□□ 2.99
SSBP2-203ENST00000504174 RALGAPBQ86X10 1494 aa33.72■■■□□ 2.99
SSBP2-203ENST00000504174 STAC3Q96MF2 364 aa33.72■■■□□ 2.99
SSBP2-203ENST00000504174 EIF3AQ14152 1382 aaKnown RBP33.72■■■□□ 2.99
SSBP2-203ENST00000504174 PLEKHG5O94827 1062 aa33.71■■■□□ 2.99
SSBP2-203ENST00000504174 PMFBP1Q8TBY8 1022 aa33.71■■■□□ 2.99
SSBP2-203ENST00000504174 CABLES1Q8TDN4 633 aa33.71■■■□□ 2.99
SSBP2-203ENST00000504174 GLI3P10071 1580 aa33.71■■■□□ 2.99
SSBP2-203ENST00000504174 HIRIP3Q9BW71 556 aaPredicted RBP33.69■■■□□ 2.98
SSBP2-203ENST00000504174 ABCA3Q99758 1704 aa33.68■■■□□ 2.98
SSBP2-203ENST00000504174 PLCH1Q4KWH8 1693 aa33.68■■■□□ 2.98
SSBP2-203ENST00000504174 NWD2Q9ULI1 1742 aa33.67■■■□□ 2.98
SSBP2-203ENST00000504174 MINK1Q8N4C8 1332 aaPredicted RBP33.67■■■□□ 2.98
SSBP2-203ENST00000504174 HRCP23327 699 aa33.66■■■□□ 2.98
SSBP2-203ENST00000504174 GPRASP1Q5JY77 1395 aa33.65■■■□□ 2.98
SSBP2-203ENST00000504174 VPS72Q15906 364 aa33.64■■■□□ 2.98
SSBP2-203ENST00000504174 TULP4Q9NRJ4 1543 aa33.63■■■□□ 2.97
SSBP2-203ENST00000504174 CCDC9Q9Y3X0 531 aaKnown RBP33.63■■■□□ 2.97
SSBP2-203ENST00000504174 ZRANB1Q9UGI0 708 aa33.62■■■□□ 2.97
SSBP2-203ENST00000504174 TRPM3Q9HCF6 1732 aaPredicted RBP33.61■■■□□ 2.97
SSBP2-203ENST00000504174 WASLO00401 505 aaPredicted RBP33.6■■■□□ 2.97
SSBP2-203ENST00000504174 BRWD3Q6RI45 1802 aa33.58■■■□□ 2.97
SSBP2-203ENST00000504174 PRR36Q9H6K5 1346 aa33.57■■■□□ 2.97
SSBP2-203ENST00000504174 SEPT12Q8IYM1 358 aa33.57■■■□□ 2.96
SSBP2-203ENST00000504174 ALS2Q96Q42 1657 aa33.56■■■□□ 2.96
SSBP2-203ENST00000504174 FAM83GA6ND36 823 aa33.56■■■□□ 2.96
SSBP2-203ENST00000504174 EP400Q96L91 3159 aa33.56■■■□□ 2.96
SSBP2-203ENST00000504174 BLMP54132 1417 aaPredicted RBP33.55■■■□□ 2.96
SSBP2-203ENST00000504174 NGDNQ8NEJ9 315 aaKnown RBP33.55■■■□□ 2.96
SSBP2-203ENST00000504174 ARHGEF28Q8N1W1 1705 aaKnown RBP33.54■■■□□ 2.96
SSBP2-203ENST00000504174 ITSN1Q15811 1721 aa33.53■■■□□ 2.96
SSBP2-203ENST00000504174 ONECUT3O60422 494 aaPredicted RBP33.51■■■□□ 2.95
SSBP2-203ENST00000504174 SF3B2Q13435 895 aaKnown RBP33.51■■■□□ 2.95
SSBP2-203ENST00000504174 COL14A1Q05707 1796 aaKnown RBP33.5■■■□□ 2.95
SSBP2-203ENST00000504174 PAK3O75914 559 aaPredicted RBP33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms