RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 FER1L4A9Z1Z3 1794 aa8.68□□□□□ -1.02
SH3TC2-204ENST00000504091 CCDC82Q8N4S0 544 aa8.67□□□□□ -1.02
SH3TC2-204ENST00000504091 CGNL1Q0VF96 1302 aa8.67□□□□□ -1.02
SH3TC2-204ENST00000504091 KNSTRNQ9Y448 316 aa8.67□□□□□ -1.02
SH3TC2-204ENST00000504091 CENPJQ9HC77 1338 aaPredicted RBP8.67□□□□□ -1.02
SH3TC2-204ENST00000504091 ZNF142P52746 1687 aaPredicted RBP8.67□□□□□ -1.02
SH3TC2-204ENST00000504091 NAIPQ13075 1403 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 RWDD1Q9H446 243 aaPredicted RBP8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 CD109Q6YHK3 1445 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 C22orf23Q9BZE7 217 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 COG6Q9Y2V7 657 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 SMAP1Q8IYB5 467 aaPredicted RBP8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 AGLP35573 1532 aa8.66□□□□□ -1.02
SH3TC2-204ENST00000504091 FSD2A1L4K1 749 aa8.65□□□□□ -1.02
SH3TC2-204ENST00000504091 OFD1O75665 1012 aa8.65□□□□□ -1.02
SH3TC2-204ENST00000504091 ZNF777Q9ULD5 760 aaPredicted RBP8.65□□□□□ -1.02
SH3TC2-204ENST00000504091 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.02
SH3TC2-204ENST00000504091 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 MKRN3Q13064 507 aaKnown RBP8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 CHAF1AQ13111 956 aaPredicted RBP8.64□□□□□ -1.03
SH3TC2-204ENST00000504091 DMRT2Q9Y5R5 561 aa8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 SEC24BO95487 1268 aa8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 ZNF771Q7L3S4 317 aaPredicted RBP8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 DHX29Q7Z478 1369 aaKnown RBP8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
SH3TC2-204ENST00000504091 MIA2Q96PC5 1412 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 ADAMTS8Q9UP79 889 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 DYNC1I1O14576 645 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 CCDC146Q8IYE0 955 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 ZFYVE16Q7Z3T8 1539 aa8.62□□□□□ -1.03
SH3TC2-204ENST00000504091 RGL3Q3MIN7 710 aa8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 PANK1Q8TE04 598 aa8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 MYOM3Q5VTT5 1437 aa8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 BCAR3O75815 825 aa8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 CBX1P83916 185 aa8.61□□□□□ -1.03
SH3TC2-204ENST00000504091 ERBB4Q15303 1308 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 TERF1P54274 439 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 LRPPRCP42704 1394 aaKnown RBP8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 PANK3Q9H999 370 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 PDZRN3Q9UPQ7 1066 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 LTBP4Q8N2S1 1624 aa8.6□□□□□ -1.03
SH3TC2-204ENST00000504091 IGHDP01880 384 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 TMF1P82094 1093 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 SASS6Q6UVJ0 657 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 CCDC39Q9UFE4 941 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 RAPGEF6Q8TEU7 1601 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 E9PSI1 815 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 HSP90B1P14625 803 aaKnown RBP8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 PTPN23Q9H3S7 1636 aa8.59□□□□□ -1.03
SH3TC2-204ENST00000504091 KDM5CP41229 1560 aa8.59□□□□□ -1.04
SH3TC2-204ENST00000504091 PLA2R1Q13018 1463 aa8.59□□□□□ -1.04
SH3TC2-204ENST00000504091 CAVIN1Q6NZI2 390 aaKnown RBP8.59□□□□□ -1.04
SH3TC2-204ENST00000504091 TNPO1Q92973 898 aaKnown RBP8.59□□□□□ -1.04
SH3TC2-204ENST00000504091 NAP1L2Q9ULW6 460 aaPredicted RBP8.59□□□□□ -1.04
SH3TC2-204ENST00000504091 ANTXR1Q9H6X2 564 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 NPATQ14207 1427 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 PTPRKQ15262 1439 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 YEATS2Q9ULM3 1422 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 APAF1O14727 1248 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 PDE3AQ14432 1141 aa8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 SETD1BQ9UPS6 1966 aaKnown RBP8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 HMGN5P82970 282 aaKnown RBP8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 CCDC94Q9BW85 323 aaPredicted RBP8.58□□□□□ -1.04
SH3TC2-204ENST00000504091 DUSP27Q5VZP5 1158 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 PRDM4Q9UKN5 801 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 MCTP1Q6DN14 999 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 CASKIN1Q8WXD9 1431 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 TAF3Q5VWG9 929 aa8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 CHMP4BQ9H444 224 aaKnown RBP8.57□□□□□ -1.04
SH3TC2-204ENST00000504091 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 ZC3H15Q8WU90 426 aaKnown RBP8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 SPOCK2Q92563 424 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 BCL2L13Q9BXK5 485 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 GTPBP4Q9BZE4 634 aaKnown RBP8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 CGNQ9P2M7 1197 aaKnown RBP8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 FYCO1Q9BQS8 1478 aa8.56□□□□□ -1.04
SH3TC2-204ENST00000504091 LETM1O95202 739 aaPredicted RBP8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 RIPK4P57078 832 aa8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 C9orf84Q5VXU9 1444 aa8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 KIF20AO95235 890 aa8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 GAS2L3Q86XJ1 694 aa8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 TNNT3P45378 269 aaPredicted RBP8.55□□□□□ -1.04
SH3TC2-204ENST00000504091 SLFN5Q08AF3 891 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms