RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
NFKB1-204ENST00000504044 LRRC59Q96AG4 307 aaKnown RBP25.87■■□□□ 1.73
NFKB1-204ENST00000504044 PRAM1Q96QH2 718 aa25.86■■□□□ 1.73
NFKB1-204ENST00000504044 DLC1Q96QB1 1528 aa25.85■■□□□ 1.73
NFKB1-204ENST00000504044 COL16A1Q07092 1604 aaPredicted RBP25.85■■□□□ 1.73
NFKB1-204ENST00000504044 PLEKHH1Q9ULM0 1364 aa25.84■■□□□ 1.73
NFKB1-204ENST00000504044 ESCO1Q5FWF5 840 aa25.84■■□□□ 1.73
NFKB1-204ENST00000504044 TRAK1Q9UPV9 953 aa25.84■■□□□ 1.73
NFKB1-204ENST00000504044 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
NFKB1-204ENST00000504044 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
NFKB1-204ENST00000504044 NPHP3Q7Z494 1330 aa25.81■■□□□ 1.72
NFKB1-204ENST00000504044 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
NFKB1-204ENST00000504044 NEUROD1Q13562 356 aa25.79■■□□□ 1.72
NFKB1-204ENST00000504044 MEX3CQ5U5Q3 659 aaKnown RBP25.79■■□□□ 1.72
NFKB1-204ENST00000504044 EIF3AQ14152 1382 aaKnown RBP25.78■■□□□ 1.72
NFKB1-204ENST00000504044 NUTM2FA1L443 756 aa25.76■■□□□ 1.71
NFKB1-204ENST00000504044 ILDR2Q71H61 639 aa25.76■■□□□ 1.71
NFKB1-204ENST00000504044 NHSL1Q5SYE7 1610 aa25.76■■□□□ 1.71
NFKB1-204ENST00000504044 L3MBTL2Q969R5 705 aa25.75■■□□□ 1.71
NFKB1-204ENST00000504044 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
NFKB1-204ENST00000504044 SOS2Q07890 1332 aaPredicted RBP25.74■■□□□ 1.71
NFKB1-204ENST00000504044 DDX17Q92841 729 aaKnown RBP25.73■■□□□ 1.71
NFKB1-204ENST00000504044 SHPRHQ149N8 1683 aa25.72■■□□□ 1.71
NFKB1-204ENST00000504044 NUTM2BA6NNL0 878 aaPredicted RBP25.7■■□□□ 1.7
NFKB1-204ENST00000504044 NUTM2EB1AL46 878 aaPredicted RBP25.7■■□□□ 1.7
NFKB1-204ENST00000504044 FOXO3O43524 673 aa25.7■■□□□ 1.7
NFKB1-204ENST00000504044 NUTM2AQ8IVF1 878 aaPredicted RBP25.7■■□□□ 1.7
NFKB1-204ENST00000504044 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
NFKB1-204ENST00000504044 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
NFKB1-204ENST00000504044 KIAA1210Q9ULL0 1709 aa25.69■■□□□ 1.7
NFKB1-204ENST00000504044 PNPLA6Q8IY17 1366 aa25.69■■□□□ 1.7
NFKB1-204ENST00000504044 PHF8Q9UPP1 1060 aa25.68■■□□□ 1.7
NFKB1-204ENST00000504044 FMN2Q9NZ56 1722 aa25.68■■□□□ 1.7
NFKB1-204ENST00000504044 PSME1Q06323 249 aa25.67■■□□□ 1.7
NFKB1-204ENST00000504044 HIRIP3Q9BW71 556 aaPredicted RBP25.67■■□□□ 1.7
NFKB1-204ENST00000504044 TONSLQ96HA7 1378 aa25.67■■□□□ 1.7
NFKB1-204ENST00000504044 ADGRB2O60241 1585 aa25.66■■□□□ 1.7
NFKB1-204ENST00000504044 WASLO00401 505 aaPredicted RBP25.66■■□□□ 1.7
NFKB1-204ENST00000504044 SOCS7O14512 581 aa25.65■■□□□ 1.7
NFKB1-204ENST00000504044 ZNF772Q68DY9 489 aaPredicted RBP25.65■■□□□ 1.7
NFKB1-204ENST00000504044 KIF1AQ12756 1690 aa25.64■■□□□ 1.7
NFKB1-204ENST00000504044 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
NFKB1-204ENST00000504044 LRP6O75581 1613 aa25.62■■□□□ 1.69
NFKB1-204ENST00000504044 KRT28Q7Z3Y7 464 aa25.61■■□□□ 1.69
NFKB1-204ENST00000504044 RGS17Q9UGC6 210 aaPredicted RBP25.61■■□□□ 1.69
NFKB1-204ENST00000504044 ROCK2O75116 1388 aaKnown RBP25.6■■□□□ 1.69
NFKB1-204ENST00000504044 XPCQ01831 940 aaPredicted RBP25.6■■□□□ 1.69
NFKB1-204ENST00000504044 CENPJQ9HC77 1338 aaPredicted RBP25.6■■□□□ 1.69
NFKB1-204ENST00000504044 PXDNQ92626 1479 aa25.6■■□□□ 1.69
NFKB1-204ENST00000504044 TULP4Q9NRJ4 1543 aa25.59■■□□□ 1.69
NFKB1-204ENST00000504044 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
NFKB1-204ENST00000504044 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
NFKB1-204ENST00000504044 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
NFKB1-204ENST00000504044 C8orf37Q96NL8 207 aa25.55■■□□□ 1.68
NFKB1-204ENST00000504044 SPATA31A3Q5VYP0 1347 aa25.55■■□□□ 1.68
NFKB1-204ENST00000504044 NGDNQ8NEJ9 315 aaKnown RBP25.54■■□□□ 1.68
NFKB1-204ENST00000504044 CDK19Q9BWU1 502 aa25.54■■□□□ 1.68
NFKB1-204ENST00000504044 SBNO1A3KN83 1393 aa25.54■■□□□ 1.68
NFKB1-204ENST00000504044 ADAMTS2O95450 1211 aa25.53■■□□□ 1.68
NFKB1-204ENST00000504044 POTEAQ6S8J7 498 aa25.53■■□□□ 1.68
NFKB1-204ENST00000504044 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
NFKB1-204ENST00000504044 HAP1P54257 671 aaPredicted RBP25.52■■□□□ 1.68
NFKB1-204ENST00000504044 NUDT16Q96DE0 195 aaKnown RBP25.52■■□□□ 1.68
NFKB1-204ENST00000504044 AFF2P51816 1311 aa25.52■■□□□ 1.68
NFKB1-204ENST00000504044 ARHGEF10O15013 1369 aa25.52■■□□□ 1.68
NFKB1-204ENST00000504044 TNS3Q68CZ2 1445 aa25.52■■□□□ 1.68
NFKB1-204ENST00000504044 SRPK2P78362 688 aaKnown RBP25.5■■□□□ 1.67
NFKB1-204ENST00000504044 LMOD2Q6P5Q4 547 aa25.5■■□□□ 1.67
NFKB1-204ENST00000504044 PRR36Q9H6K5 1346 aa25.5■■□□□ 1.67
NFKB1-204ENST00000504044 COL22A1Q8NFW1 1626 aaPredicted RBP25.49■■□□□ 1.67
NFKB1-204ENST00000504044 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
NFKB1-204ENST00000504044 CCDC61Q9Y6R9 512 aa25.49■■□□□ 1.67
NFKB1-204ENST00000504044 TRPM1Q7Z4N2 1603 aa25.48■■□□□ 1.67
NFKB1-204ENST00000504044 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
NFKB1-204ENST00000504044 CARD11Q9BXL7 1154 aa25.47■■□□□ 1.67
NFKB1-204ENST00000504044 EVC2Q86UK5 1308 aa25.46■■□□□ 1.67
NFKB1-204ENST00000504044 USP32Q8NFA0 1604 aa25.46■■□□□ 1.67
NFKB1-204ENST00000504044 ATP7BP35670 1465 aa25.46■■□□□ 1.67
NFKB1-204ENST00000504044 RXRBP28702 533 aa25.45■■□□□ 1.66
NFKB1-204ENST00000504044 NBPF8Q3BBV2 869 aa25.45■■□□□ 1.66
NFKB1-204ENST00000504044 RGPD8O14715 1765 aaPredicted RBP25.42■■□□□ 1.66
NFKB1-204ENST00000504044 PAK3O75914 559 aaPredicted RBP25.42■■□□□ 1.66
NFKB1-204ENST00000504044 USP21Q9UK80 565 aa25.42■■□□□ 1.66
NFKB1-204ENST00000504044 ITSN1Q15811 1721 aa25.42■■□□□ 1.66
NFKB1-204ENST00000504044 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
NFKB1-204ENST00000504044 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
NFKB1-204ENST00000504044 PLEKHG3A1L390 1219 aa25.4■■□□□ 1.66
NFKB1-204ENST00000504044 FNBP4Q8N3X1 1017 aaPredicted RBP25.4■■□□□ 1.66
NFKB1-204ENST00000504044 QTRT2Q9H974 415 aaKnown RBP25.4■■□□□ 1.66
NFKB1-204ENST00000504044 TRPC5Q9UL62 973 aaPredicted RBP25.39■■□□□ 1.66
NFKB1-204ENST00000504044 RBM6P78332 1123 aaKnown RBP25.38■■□□□ 1.65
NFKB1-204ENST00000504044 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
NFKB1-204ENST00000504044 ACEP12821 1306 aa25.37■■□□□ 1.65
NFKB1-204ENST00000504044 QRICH2Q9H0J4 1663 aa25.37■■□□□ 1.65
NFKB1-204ENST00000504044 POLR3AO14802 1390 aaPredicted RBP25.37■■□□□ 1.65
NFKB1-204ENST00000504044 SLC24A1O60721 1099 aa25.36■■□□□ 1.65
NFKB1-204ENST00000504044 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
NFKB1-204ENST00000504044 PLEKHG5O94827 1062 aa25.35■■□□□ 1.65
NFKB1-204ENST00000504044 SBNO2Q9Y2G9 1366 aa25.34■■□□□ 1.65
NFKB1-204ENST00000504044 BRD4O60885 1362 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms