RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 PCDHGC3Q9UN70 934 aa8.93□□□□□ -0.98
SCLT1-206ENST00000503565 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 NDUFV2P19404 249 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 USP46P62068 366 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 TRIM26Q12899 539 aaPredicted RBP8.92□□□□□ -0.98
SCLT1-206ENST00000503565 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 FAM160A2Q8N612 972 aaPredicted RBP8.92□□□□□ -0.98
SCLT1-206ENST00000503565 CLUAP1Q96AJ1 413 aa8.92□□□□□ -0.98
SCLT1-206ENST00000503565 A6NJR5 290 aa8.91□□□□□ -0.98
SCLT1-206ENST00000503565 ADH1BP00325 375 aa8.91□□□□□ -0.98
SCLT1-206ENST00000503565 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
SCLT1-206ENST00000503565 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
SCLT1-206ENST00000503565 SALL2Q9Y467 1007 aaPredicted RBP8.9□□□□□ -0.98
SCLT1-206ENST00000503565 MCM6Q14566 821 aa8.89□□□□□ -0.99
SCLT1-206ENST00000503565 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
SCLT1-206ENST00000503565 EMID1Q96A84 441 aaPredicted RBP8.89□□□□□ -0.99
SCLT1-206ENST00000503565 SPSB2Q99619 263 aa8.89□□□□□ -0.99
SCLT1-206ENST00000503565 TRAK2O60296 914 aa8.88□□□□□ -0.99
SCLT1-206ENST00000503565 S1PR4O95977 384 aa8.88□□□□□ -0.99
SCLT1-206ENST00000503565 HRCP23327 699 aa8.88□□□□□ -0.99
SCLT1-206ENST00000503565 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
SCLT1-206ENST00000503565 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
SCLT1-206ENST00000503565 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
SCLT1-206ENST00000503565 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
SCLT1-206ENST00000503565 PRDM9Q9NQV7 894 aa8.87□□□□□ -0.99
SCLT1-206ENST00000503565 FMNL1O95466 1100 aaPredicted RBP8.86□□□□□ -0.99
SCLT1-206ENST00000503565 FDX1P10109 184 aa8.86□□□□□ -0.99
SCLT1-206ENST00000503565 MYSM1Q5VVJ2 828 aa8.86□□□□□ -0.99
SCLT1-206ENST00000503565 PCDHB15Q9Y5E8 787 aa8.86□□□□□ -0.99
SCLT1-206ENST00000503565 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
SCLT1-206ENST00000503565 RSBN1LQ6PCB5 846 aaPredicted RBP8.85□□□□□ -0.99
SCLT1-206ENST00000503565 SLC6A16Q9GZN6 736 aa8.85□□□□□ -0.99
SCLT1-206ENST00000503565 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
SCLT1-206ENST00000503565 SPTLC1O15269 473 aa8.84□□□□□ -0.99
SCLT1-206ENST00000503565 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
SCLT1-206ENST00000503565 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
SCLT1-206ENST00000503565 PROCA1Q8NCQ7 364 aaPredicted RBP8.84□□□□□ -0.99
SCLT1-206ENST00000503565 Q3C1V9 767 aa8.83□□□□□ -1
SCLT1-206ENST00000503565 RIC3Q7Z5B4 369 aa8.83□□□□□ -1
SCLT1-206ENST00000503565 GJA5P36382 358 aa8.82□□□□□ -1
SCLT1-206ENST00000503565 MSS51Q4VC12 460 aa8.82□□□□□ -1
SCLT1-206ENST00000503565 FBXO31Q5XUX0 539 aaPredicted RBP8.82□□□□□ -1
SCLT1-206ENST00000503565 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
SCLT1-206ENST00000503565 POM121Q96HA1 1249 aa8.81□□□□□ -1
SCLT1-206ENST00000503565 RGS20O76081 388 aa8.8□□□□□ -1
SCLT1-206ENST00000503565 MMP16P51512 607 aa8.8□□□□□ -1
SCLT1-206ENST00000503565 POLR3EQ9NVU0 708 aa8.8□□□□□ -1
SCLT1-206ENST00000503565 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
SCLT1-206ENST00000503565 LIAT1Q6ZQX7 453 aa8.79□□□□□ -1
SCLT1-206ENST00000503565 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
SCLT1-206ENST00000503565 FNBP4Q8N3X1 1017 aaPredicted RBP8.79□□□□□ -1
SCLT1-206ENST00000503565 ANKLE1Q8NAG6 615 aa8.79□□□□□ -1
SCLT1-206ENST00000503565 CABLES1Q8TDN4 633 aa8.79□□□□□ -1
SCLT1-206ENST00000503565 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.79□□□□□ -1
SCLT1-206ENST00000503565 DXOO77932 396 aaKnown RBP8.78□□□□□ -1
SCLT1-206ENST00000503565 QPCTQ16769 361 aa8.78□□□□□ -1
SCLT1-206ENST00000503565 RETREG3Q86VR2 466 aa8.78□□□□□ -1
SCLT1-206ENST00000503565 C6orf229H3BNL8 230 aa8.77□□□□□ -1.01
SCLT1-206ENST00000503565 GGCXP38435 758 aa8.77□□□□□ -1.01
SCLT1-206ENST00000503565 TUSC1Q2TAM9 212 aa8.77□□□□□ -1.01
SCLT1-206ENST00000503565 PRKD2Q9BZL6 878 aa8.77□□□□□ -1.01
SCLT1-206ENST00000503565 ZNF777Q9ULD5 760 aaPredicted RBP8.77□□□□□ -1.01
SCLT1-206ENST00000503565 CFAP99D6REC4 459 aa8.76□□□□□ -1.01
SCLT1-206ENST00000503565 LILRB3O75022 631 aa8.76□□□□□ -1.01
SCLT1-206ENST00000503565 MTMR2Q13614 643 aa8.76□□□□□ -1.01
SCLT1-206ENST00000503565 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
SCLT1-206ENST00000503565 FCF1Q9Y324 198 aaKnown RBP8.76□□□□□ -1.01
SCLT1-206ENST00000503565 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
SCLT1-206ENST00000503565 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
SCLT1-206ENST00000503565 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
SCLT1-206ENST00000503565 JUNDP17535 347 aa8.74□□□□□ -1.01
SCLT1-206ENST00000503565 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
SCLT1-206ENST00000503565 ATP1B4Q9UN42 357 aaPredicted RBP8.73□□□□□ -1.01
SCLT1-206ENST00000503565 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
SCLT1-206ENST00000503565 V9GY48 417 aaPredicted RBP8.73□□□□□ -1.01
SCLT1-206ENST00000503565 SPDYE5A6NIY4 337 aa8.72□□□□□ -1.01
SCLT1-206ENST00000503565 PDIA4P13667 645 aaKnown RBP8.72□□□□□ -1.01
SCLT1-206ENST00000503565 SLC19A1P41440 591 aa8.72□□□□□ -1.01
SCLT1-206ENST00000503565 ZBTB3Q9H5J0 574 aa8.72□□□□□ -1.01
SCLT1-206ENST00000503565 SNRKQ9NRH2 765 aa8.72□□□□□ -1.01
SCLT1-206ENST00000503565 RFC5P40937 340 aa8.71□□□□□ -1.02
SCLT1-206ENST00000503565 PTCRAQ6ISU1 281 aaPredicted RBP8.71□□□□□ -1.02
SCLT1-206ENST00000503565 RAD21O60216 631 aa8.7□□□□□ -1.02
SCLT1-206ENST00000503565 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
SCLT1-206ENST00000503565 TRIM67Q6ZTA4 783 aa8.7□□□□□ -1.02
SCLT1-206ENST00000503565 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
SCLT1-206ENST00000503565 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
SCLT1-206ENST00000503565 BANK1Q8NDB2 785 aa8.69□□□□□ -1.02
SCLT1-206ENST00000503565 LYPD8Q6UX82 237 aa8.68□□□□□ -1.02
SCLT1-206ENST00000503565 SERPINA10Q9UK55 444 aa8.68□□□□□ -1.02
SCLT1-206ENST00000503565 PPP2R2DQ66LE6 453 aa8.67□□□□□ -1.02
SCLT1-206ENST00000503565 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
SCLT1-206ENST00000503565 NUTM2BA6NNL0 878 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-206ENST00000503565 NUTM2EB1AL46 878 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-206ENST00000503565 RPIAP49247 311 aa8.66□□□□□ -1.02
SCLT1-206ENST00000503565 PTPRNQ16849 979 aa8.66□□□□□ -1.02
SCLT1-206ENST00000503565 NUTM2DQ5VT03 806 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-206ENST00000503565 ZNF598Q86UK7 904 aaKnown RBP8.66□□□□□ -1.02
SCLT1-206ENST00000503565 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms