RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 SIRT1Q96EB6 747 aa24.08■■□□□ 1.45
TSPAN17-203ENST00000503030 POGKQ9P215 609 aa24.08■■□□□ 1.45
TSPAN17-203ENST00000503030 DLC1Q96QB1 1528 aa24.08■■□□□ 1.45
TSPAN17-203ENST00000503030 NBPF8Q3BBV2 869 aa24.07■■□□□ 1.44
TSPAN17-203ENST00000503030 TRPM1Q7Z4N2 1603 aa24.06■■□□□ 1.44
TSPAN17-203ENST00000503030 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
TSPAN17-203ENST00000503030 HSPA1LP34931 641 aa24.03■■□□□ 1.44
TSPAN17-203ENST00000503030 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
TSPAN17-203ENST00000503030 MST1RQ04912 1400 aa24.02■■□□□ 1.44
TSPAN17-203ENST00000503030 ARHGEF28Q8N1W1 1705 aaKnown RBP24.02■■□□□ 1.44
TSPAN17-203ENST00000503030 CDC42BPGQ6DT37 1551 aa24.01■■□□□ 1.43
TSPAN17-203ENST00000503030 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
TSPAN17-203ENST00000503030 NUTM2FA1L443 756 aa23.97■■□□□ 1.43
TSPAN17-203ENST00000503030 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
TSPAN17-203ENST00000503030 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
TSPAN17-203ENST00000503030 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
TSPAN17-203ENST00000503030 RALGAPBQ86X10 1494 aa23.95■■□□□ 1.42
TSPAN17-203ENST00000503030 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
TSPAN17-203ENST00000503030 FMN2Q9NZ56 1722 aa23.93■■□□□ 1.42
TSPAN17-203ENST00000503030 CARD11Q9BXL7 1154 aa23.93■■□□□ 1.42
TSPAN17-203ENST00000503030 ADGRB2O60241 1585 aa23.92■■□□□ 1.42
TSPAN17-203ENST00000503030 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
TSPAN17-203ENST00000503030 CENPJQ9HC77 1338 aaPredicted RBP23.91■■□□□ 1.42
TSPAN17-203ENST00000503030 ORAI2Q96SN7 254 aa23.91■■□□□ 1.42
TSPAN17-203ENST00000503030 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
TSPAN17-203ENST00000503030 ESCO1Q5FWF5 840 aa23.9■■□□□ 1.42
TSPAN17-203ENST00000503030 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
TSPAN17-203ENST00000503030 QRICH2Q9H0J4 1663 aa23.87■■□□□ 1.41
TSPAN17-203ENST00000503030 WASLO00401 505 aaPredicted RBP23.87■■□□□ 1.41
TSPAN17-203ENST00000503030 DDX17Q92841 729 aaKnown RBP23.87■■□□□ 1.41
TSPAN17-203ENST00000503030 AHDC1Q5TGY3 1603 aaPredicted RBP23.86■■□□□ 1.41
TSPAN17-203ENST00000503030 RGPD8O14715 1765 aaPredicted RBP23.85■■□□□ 1.41
TSPAN17-203ENST00000503030 NHSL1Q5SYE7 1610 aa23.84■■□□□ 1.41
TSPAN17-203ENST00000503030 COL16A1Q07092 1604 aaPredicted RBP23.83■■□□□ 1.41
TSPAN17-203ENST00000503030 USP32Q8NFA0 1604 aa23.82■■□□□ 1.4
TSPAN17-203ENST00000503030 CDK19Q9BWU1 502 aa23.82■■□□□ 1.4
TSPAN17-203ENST00000503030 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
TSPAN17-203ENST00000503030 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
TSPAN17-203ENST00000503030 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
TSPAN17-203ENST00000503030 FOXO3O43524 673 aa23.79■■□□□ 1.4
TSPAN17-203ENST00000503030 PHF8Q9UPP1 1060 aa23.79■■□□□ 1.4
TSPAN17-203ENST00000503030 KIF1AQ12756 1690 aa23.78■■□□□ 1.4
TSPAN17-203ENST00000503030 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
TSPAN17-203ENST00000503030 XPCQ01831 940 aaPredicted RBP23.77■■□□□ 1.4
TSPAN17-203ENST00000503030 NPHP3Q7Z494 1330 aa23.77■■□□□ 1.4
TSPAN17-203ENST00000503030 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
TSPAN17-203ENST00000503030 NUDT16Q96DE0 195 aaKnown RBP23.76■■□□□ 1.39
TSPAN17-203ENST00000503030 ATP7BP35670 1465 aa23.75■■□□□ 1.39
TSPAN17-203ENST00000503030 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
TSPAN17-203ENST00000503030 JCADQ9P266 1359 aa23.75■■□□□ 1.39
TSPAN17-203ENST00000503030 EVC2Q86UK5 1308 aa23.74■■□□□ 1.39
TSPAN17-203ENST00000503030 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
TSPAN17-203ENST00000503030 USP47Q96K76 1375 aa23.73■■□□□ 1.39
TSPAN17-203ENST00000503030 ITSN1Q15811 1721 aa23.73■■□□□ 1.39
TSPAN17-203ENST00000503030 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
TSPAN17-203ENST00000503030 ST20-MTHFSA0A0A6YYL1 179 aa23.71■■□□□ 1.39
TSPAN17-203ENST00000503030 PXDNQ92626 1479 aa23.7■■□□□ 1.38
TSPAN17-203ENST00000503030 SBNO2Q9Y2G9 1366 aa23.69■■□□□ 1.38
TSPAN17-203ENST00000503030 KRT28Q7Z3Y7 464 aa23.69■■□□□ 1.38
TSPAN17-203ENST00000503030 NGDNQ8NEJ9 315 aaKnown RBP23.69■■□□□ 1.38
TSPAN17-203ENST00000503030 CCDC61Q9Y6R9 512 aa23.69■■□□□ 1.38
TSPAN17-203ENST00000503030 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TSPAN17-203ENST00000503030 TOPAZ1Q8N9V7 1692 aa23.68■■□□□ 1.38
TSPAN17-203ENST00000503030 PSME1Q06323 249 aa23.68■■□□□ 1.38
TSPAN17-203ENST00000503030 MED1Q15648 1581 aaPredicted RBP23.66■■□□□ 1.38
TSPAN17-203ENST00000503030 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
TSPAN17-203ENST00000503030 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
TSPAN17-203ENST00000503030 TESK2Q96S53 571 aa23.64■■□□□ 1.37
TSPAN17-203ENST00000503030 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
TSPAN17-203ENST00000503030 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
TSPAN17-203ENST00000503030 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
TSPAN17-203ENST00000503030 SPATA31A6Q5VVP1 1343 aa23.62■■□□□ 1.37
TSPAN17-203ENST00000503030 ACEP12821 1306 aa23.61■■□□□ 1.37
TSPAN17-203ENST00000503030 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
TSPAN17-203ENST00000503030 CABP1Q9NZU7 370 aa23.61■■□□□ 1.37
TSPAN17-203ENST00000503030 SPATA31A3Q5VYP0 1347 aa23.6■■□□□ 1.37
TSPAN17-203ENST00000503030 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
TSPAN17-203ENST00000503030 ATAD2Q6PL18 1390 aa23.6■■□□□ 1.37
TSPAN17-203ENST00000503030 TNS3Q68CZ2 1445 aa23.59■■□□□ 1.37
TSPAN17-203ENST00000503030 SBNO1A3KN83 1393 aa23.59■■□□□ 1.37
TSPAN17-203ENST00000503030 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
TSPAN17-203ENST00000503030 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
TSPAN17-203ENST00000503030 PAK3O75914 559 aaPredicted RBP23.58■■□□□ 1.37
TSPAN17-203ENST00000503030 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
TSPAN17-203ENST00000503030 LRP6O75581 1613 aa23.58■■□□□ 1.36
TSPAN17-203ENST00000503030 TRPM3Q9HCF6 1732 aaPredicted RBP23.57■■□□□ 1.36
TSPAN17-203ENST00000503030 SLC24A1O60721 1099 aa23.57■■□□□ 1.36
TSPAN17-203ENST00000503030 MEX3CQ5U5Q3 659 aaKnown RBP23.57■■□□□ 1.36
TSPAN17-203ENST00000503030 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
TSPAN17-203ENST00000503030 EIF4G2P78344 907 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN17-203ENST00000503030 TMF1P82094 1093 aa23.56■■□□□ 1.36
TSPAN17-203ENST00000503030 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
TSPAN17-203ENST00000503030 COL22A1Q8NFW1 1626 aaPredicted RBP23.55■■□□□ 1.36
TSPAN17-203ENST00000503030 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
TSPAN17-203ENST00000503030 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
TSPAN17-203ENST00000503030 ADAMTS2O95450 1211 aa23.51■■□□□ 1.35
TSPAN17-203ENST00000503030 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
TSPAN17-203ENST00000503030 CABLES1Q8TDN4 633 aa23.5■■□□□ 1.35
TSPAN17-203ENST00000503030 PUS7Q96PZ0 661 aaKnown RBP23.5■■□□□ 1.35
TSPAN17-203ENST00000503030 HAP1P54257 671 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms