RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 WAPLQ7Z5K2 1190 aa37.12■■■■□ 3.53
PROM1-202ENST00000502501 SIN3AQ96ST3 1273 aa37.11■■■■□ 3.53
PROM1-202ENST00000502501 ADGRB2O60241 1585 aa37.11■■■■□ 3.53
PROM1-202ENST00000502501 L3MBTL2Q969R5 705 aa37.09■■■■□ 3.53
PROM1-202ENST00000502501 FMN2Q9NZ56 1722 aa37.08■■■■□ 3.53
PROM1-202ENST00000502501 MED1Q15648 1581 aaPredicted RBP37.08■■■■□ 3.53
PROM1-202ENST00000502501 ARHGEF28Q8N1W1 1705 aaKnown RBP37.07■■■■□ 3.52
PROM1-202ENST00000502501 PRAM1Q96QH2 718 aa37.04■■■■□ 3.52
PROM1-202ENST00000502501 JCADQ9P266 1359 aa37.02■■■■□ 3.52
PROM1-202ENST00000502501 SHPRHQ149N8 1683 aa36.99■■■■□ 3.51
PROM1-202ENST00000502501 NEUROD1Q13562 356 aa36.99■■■■□ 3.51
PROM1-202ENST00000502501 TRPM1Q7Z4N2 1603 aa36.99■■■■□ 3.51
PROM1-202ENST00000502501 TRAK1Q9UPV9 953 aa36.98■■■■□ 3.51
PROM1-202ENST00000502501 POGKQ9P215 609 aa36.97■■■■□ 3.51
PROM1-202ENST00000502501 DISP3Q9P2K9 1392 aa36.95■■■■□ 3.51
PROM1-202ENST00000502501 KIF1AQ12756 1690 aa36.94■■■■□ 3.5
PROM1-202ENST00000502501 ANKARQ7Z5J8 1434 aa36.93■■■■□ 3.5
PROM1-202ENST00000502501 ORAI2Q96SN7 254 aa36.91■■■■□ 3.5
PROM1-202ENST00000502501 EIF3AQ14152 1382 aaKnown RBP36.91■■■■□ 3.5
PROM1-202ENST00000502501 TONSLQ96HA7 1378 aa36.9■■■■□ 3.5
PROM1-202ENST00000502501 CLSPNQ9HAW4 1339 aa36.89■■■■□ 3.5
PROM1-202ENST00000502501 NBPF1Q3BBV0 1214 aa36.88■■■■□ 3.49
PROM1-202ENST00000502501 SOS2Q07890 1332 aaPredicted RBP36.87■■■■□ 3.49
PROM1-202ENST00000502501 SPATA31A6Q5VVP1 1343 aa36.87■■■■□ 3.49
PROM1-202ENST00000502501 PCGF6Q9BYE7 350 aa36.87■■■■□ 3.49
PROM1-202ENST00000502501 USP32Q8NFA0 1604 aa36.85■■■■□ 3.49
PROM1-202ENST00000502501 LRRC59Q96AG4 307 aaKnown RBP36.85■■■■□ 3.49
PROM1-202ENST00000502501 TULP4Q9NRJ4 1543 aa36.85■■■■□ 3.49
PROM1-202ENST00000502501 NPHP3Q7Z494 1330 aa36.85■■■■□ 3.49
PROM1-202ENST00000502501 GPRASP1Q5JY77 1395 aa36.84■■■■□ 3.49
PROM1-202ENST00000502501 SAFB2Q14151 953 aaKnown RBP eCLIP36.84■■■■□ 3.49
PROM1-202ENST00000502501 ESCO1Q5FWF5 840 aa36.84■■■■□ 3.49
PROM1-202ENST00000502501 PXDNQ92626 1479 aa36.82■■■■□ 3.49
PROM1-202ENST00000502501 RGPD8O14715 1765 aaPredicted RBP36.79■■■■□ 3.48
PROM1-202ENST00000502501 WASLO00401 505 aaPredicted RBP36.78■■■■□ 3.48
PROM1-202ENST00000502501 ROCK2O75116 1388 aaKnown RBP36.78■■■■□ 3.48
PROM1-202ENST00000502501 RALGAPBQ86X10 1494 aa36.77■■■■□ 3.48
PROM1-202ENST00000502501 MINK1Q8N4C8 1332 aaPredicted RBP36.77■■■■□ 3.48
PROM1-202ENST00000502501 DDX17Q92841 729 aaKnown RBP36.76■■■■□ 3.48
PROM1-202ENST00000502501 PNPLA6Q8IY17 1366 aa36.76■■■■□ 3.47
PROM1-202ENST00000502501 COL22A1Q8NFW1 1626 aaPredicted RBP36.75■■■■□ 3.47
PROM1-202ENST00000502501 ITSN1Q15811 1721 aa36.73■■■■□ 3.47
PROM1-202ENST00000502501 NUTM2FA1L443 756 aa36.73■■■■□ 3.47
PROM1-202ENST00000502501 NBPF8Q3BBV2 869 aa36.73■■■■□ 3.47
PROM1-202ENST00000502501 HIRIP3Q9BW71 556 aaPredicted RBP36.73■■■■□ 3.47
PROM1-202ENST00000502501 CENPJQ9HC77 1338 aaPredicted RBP36.73■■■■□ 3.47
PROM1-202ENST00000502501 LRP6O75581 1613 aa36.73■■■■□ 3.47
PROM1-202ENST00000502501 QRICH2Q9H0J4 1663 aa36.73■■■■□ 3.47
PROM1-202ENST00000502501 ATP7BP35670 1465 aa36.71■■■■□ 3.47
PROM1-202ENST00000502501 PHF8Q9UPP1 1060 aa36.71■■■■□ 3.47
PROM1-202ENST00000502501 FOXO3O43524 673 aa36.7■■■■□ 3.47
PROM1-202ENST00000502501 TIMELESSQ9UNS1 1208 aa36.69■■■■□ 3.46
PROM1-202ENST00000502501 PHF23Q9BUL5 403 aaPredicted RBP36.67■■■■□ 3.46
PROM1-202ENST00000502501 TOPAZ1Q8N9V7 1692 aa36.67■■■■□ 3.46
PROM1-202ENST00000502501 PRR36Q9H6K5 1346 aa36.66■■■■□ 3.46
PROM1-202ENST00000502501 SBNO1A3KN83 1393 aa36.61■■■■□ 3.45
PROM1-202ENST00000502501 SBNO2Q9Y2G9 1366 aa36.61■■■■□ 3.45
PROM1-202ENST00000502501 CDK19Q9BWU1 502 aa36.59■■■■□ 3.45
PROM1-202ENST00000502501 SPATA31A3Q5VYP0 1347 aa36.58■■■■□ 3.45
PROM1-202ENST00000502501 PSME1Q06323 249 aa36.57■■■■□ 3.44
PROM1-202ENST00000502501 NUDT16Q96DE0 195 aaKnown RBP36.57■■■■□ 3.44
PROM1-202ENST00000502501 TNS3Q68CZ2 1445 aa36.57■■■■□ 3.44
PROM1-202ENST00000502501 RGS17Q9UGC6 210 aaPredicted RBP36.56■■■■□ 3.44
PROM1-202ENST00000502501 TRPM3Q9HCF6 1732 aaPredicted RBP36.56■■■■□ 3.44
PROM1-202ENST00000502501 KRT28Q7Z3Y7 464 aa36.55■■■■□ 3.44
PROM1-202ENST00000502501 CARD11Q9BXL7 1154 aa36.54■■■■□ 3.44
PROM1-202ENST00000502501 CCDC61Q9Y6R9 512 aa36.53■■■■□ 3.44
PROM1-202ENST00000502501 XPCQ01831 940 aaPredicted RBP36.52■■■■□ 3.44
PROM1-202ENST00000502501 POLR3AO14802 1390 aaPredicted RBP36.52■■■■□ 3.44
PROM1-202ENST00000502501 ILDR2Q71H61 639 aa36.51■■■■□ 3.44
PROM1-202ENST00000502501 PMFBP1Q8TBY8 1022 aa36.5■■■■□ 3.43
PROM1-202ENST00000502501 ARHGEF10O15013 1369 aa36.5■■■■□ 3.43
PROM1-202ENST00000502501 MEX3CQ5U5Q3 659 aaKnown RBP36.49■■■■□ 3.43
PROM1-202ENST00000502501 ALS2Q96Q42 1657 aa36.48■■■■□ 3.43
PROM1-202ENST00000502501 PLEKHG3A1L390 1219 aa36.48■■■■□ 3.43
PROM1-202ENST00000502501 EVC2Q86UK5 1308 aa36.48■■■■□ 3.43
PROM1-202ENST00000502501 NUTM2BA6NNL0 878 aaPredicted RBP36.45■■■■□ 3.43
PROM1-202ENST00000502501 NUTM2EB1AL46 878 aaPredicted RBP36.45■■■■□ 3.43
PROM1-202ENST00000502501 NUTM2AQ8IVF1 878 aaPredicted RBP36.45■■■■□ 3.43
PROM1-202ENST00000502501 MARF1Q9Y4F3 1742 aaKnown RBP36.45■■■■□ 3.43
PROM1-202ENST00000502501 SRPK2P78362 688 aaKnown RBP36.44■■■■□ 3.42
PROM1-202ENST00000502501 NGDNQ8NEJ9 315 aaKnown RBP36.43■■■■□ 3.42
PROM1-202ENST00000502501 ZNF772Q68DY9 489 aaPredicted RBP36.42■■■■□ 3.42
PROM1-202ENST00000502501 CCER1Q8TC90 406 aaPredicted RBP36.42■■■■□ 3.42
PROM1-202ENST00000502501 PPIP5K1Q6PFW1 1433 aa36.42■■■■□ 3.42
PROM1-202ENST00000502501 ABCA3Q99758 1704 aa36.4■■■■□ 3.42
PROM1-202ENST00000502501 BRD4O60885 1362 aaPredicted RBP36.39■■■■□ 3.42
PROM1-202ENST00000502501 CABP2Q9NPB3 220 aa36.38■■■■□ 3.41
PROM1-202ENST00000502501 ACEP12821 1306 aa36.36■■■■□ 3.41
PROM1-202ENST00000502501 ATAD2Q6PL18 1390 aa36.36■■■■□ 3.41
PROM1-202ENST00000502501 SLC24A1O60721 1099 aa36.34■■■■□ 3.41
PROM1-202ENST00000502501 POTEAQ6S8J7 498 aa36.34■■■■□ 3.41
PROM1-202ENST00000502501 CRYBG1Q9Y4K1 1723 aa36.33■■■■□ 3.41
PROM1-202ENST00000502501 AFF2P51816 1311 aa36.33■■■■□ 3.41
PROM1-202ENST00000502501 C8orf37Q96NL8 207 aa36.32■■■■□ 3.4
PROM1-202ENST00000502501 ADAMTS2O95450 1211 aa36.31■■■■□ 3.4
PROM1-202ENST00000502501 FNBP4Q8N3X1 1017 aaPredicted RBP36.3■■■■□ 3.4
PROM1-202ENST00000502501 PUS7Q96PZ0 661 aaKnown RBP36.3■■■■□ 3.4
PROM1-202ENST00000502501 USP47Q96K76 1375 aa36.27■■■■□ 3.4
PROM1-202ENST00000502501 NGLY1Q96IV0 654 aa36.26■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms