RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CFAP53Q96M91 514 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 WDR78Q5VTH9 848 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 NUCKS1Q9H1E3 243 aaKnown RBP5.73□□□□□ -1.49
NEAT1-202ENST00000501122 GORABQ5T7V8 394 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 UBXN4Q92575 508 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 GIGYF2Q6Y7W6 1299 aaKnown RBP5.73□□□□□ -1.49
NEAT1-202ENST00000501122 KDM2AQ9Y2K7 1162 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 FAM114A1Q8IWE2 563 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 RNF187Q5TA31 235 aaPredicted RBP5.73□□□□□ -1.49
NEAT1-202ENST00000501122 TSPY26PQ9H489 355 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 HDAC1Q13547 482 aaPredicted RBP5.73□□□□□ -1.49
NEAT1-202ENST00000501122 SPATA24Q86W54 205 aa5.73□□□□□ -1.49
NEAT1-202ENST00000501122 ST18O60284 1047 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 SEPT6Q14141 434 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 GOPCQ9HD26 462 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 PPP1R1BQ9UD71 204 aaPredicted RBP5.72□□□□□ -1.49
NEAT1-202ENST00000501122 TERF1P54274 439 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 MPNDQ8N594 471 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 LMAN1P49257 510 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 BIRC2Q13490 618 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 CEP57Q86XR8 500 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 RSRC1Q96IZ7 334 aaKnown RBP5.72□□□□□ -1.49
NEAT1-202ENST00000501122 UIMC1Q96RL1 719 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 GABPB1Q06547 395 aaPredicted RBP5.72□□□□□ -1.49
NEAT1-202ENST00000501122 NOL8Q76FK4 1167 aaKnown RBP5.72□□□□□ -1.49
NEAT1-202ENST00000501122 CEP83Q9Y592 693 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 XPCQ01831 940 aaPredicted RBP5.72□□□□□ -1.49
NEAT1-202ENST00000501122 CREBRFQ8IUR6 639 aa5.72□□□□□ -1.49
NEAT1-202ENST00000501122 CCDC172P0C7W6 258 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 CCDC175P0C221 793 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 PPP2R5AQ15172 486 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 MCTP1Q6DN14 999 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 SHTN1A0MZ66 631 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 GTF2E1P29083 439 aaPredicted RBP5.71□□□□□ -1.49
NEAT1-202ENST00000501122 NUDCQ9Y266 331 aa5.71□□□□□ -1.49
NEAT1-202ENST00000501122 KIF18AQ8NI77 898 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 WDR63Q8IWG1 891 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 PMFBP1Q8TBY8 1022 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 TRIM5Q9C035 493 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 NAT10Q9H0A0 1025 aaKnown RBP5.71□□□□□ -1.5
NEAT1-202ENST00000501122 LRRCC1Q9C099 1032 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 DHX8Q14562 1220 aaKnown RBP5.71□□□□□ -1.5
NEAT1-202ENST00000501122 ARID3CA6NKF2 412 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 CENPJQ9HC77 1338 aaPredicted RBP5.71□□□□□ -1.5
NEAT1-202ENST00000501122 PLEKHD1A6NEE1 506 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 DDX12PQ92771 950 aa5.71□□□□□ -1.5
NEAT1-202ENST00000501122 NEUROD2Q15784 382 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 CCDC102AQ96A19 550 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 CWC22Q9HCG8 908 aaKnown RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 V9GYY5 206 aaPredicted RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 MICALL1Q8N3F8 863 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 FOXD4L6Q3SYB3 417 aaPredicted RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 FOXD4L3Q6VB84 417 aaPredicted RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 CLNS1AP54105 237 aaKnown RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 CCDC196A0A1B0GTZ2 297 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 HS1BP3Q53T59 392 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 IRAK4Q9NWZ3 460 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 SYCP1Q15431 976 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 FILIP1Q7Z7B0 1213 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 PPM1EQ8WY54 764 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 KIF1CO43896 1103 aaKnown RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 XRCC6P12956 609 aaKnown RBP eCLIP5.7□□□□□ -1.57e-26■■■□□ 15.7
NEAT1-202ENST00000501122 NBPF6Q5VWK0 638 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 NBPF5PQ86XG9 351 aaPredicted RBP5.7□□□□□ -1.5
NEAT1-202ENST00000501122 NBPF4Q96M43 638 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 MAPK8IP3Q9UPT6 1336 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 POGKQ9P215 609 aa5.7□□□□□ -1.5
NEAT1-202ENST00000501122 SEPT7Q16181 437 aaKnown RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 KIF3BO15066 747 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 GCKP35557 465 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 SH2D4BQ5SQS7 431 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 RBM26Q5T8P6 1007 aaKnown RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 DAAM2Q86T65 1068 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 TAX1BP1Q86VP1 789 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 NPM1P06748 294 aaKnown RBP eCLIP5.69□□□□□ -1.58e-9■□□□□ 8.4
NEAT1-202ENST00000501122 OTUD6BQ8N6M0 293 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 HSP90AB2PQ58FF8 381 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 SPC24Q8NBT2 197 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 POLD1P28340 1107 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 SPATS2LQ9NUQ6 558 aaKnown RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 PRPF40AO75400 957 aaKnown RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 PAXBP1Q9Y5B6 917 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 MBD3O95983 291 aa5.69□□□□□ -1.5
NEAT1-202ENST00000501122 ZNF513Q8N8E2 541 aaPredicted RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 LRRFIP2Q9Y608 721 aaKnown RBP5.69□□□□□ -1.5
NEAT1-202ENST00000501122 KIF4AO95239 1232 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 FAM184BQ9ULE4 1060 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 PABPN1Q86U42 306 aaKnown RBP eCLIP5.68□□□□□ -1.5
NEAT1-202ENST00000501122 CEP104O60308 925 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 SATB1Q01826 763 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 CCDC50Q8IVM0 306 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 MRFAP1L1Q96HT8 127 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 TTC36A6NLP5 189 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 BRMS1Q9HCU9 246 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 DNAI2Q9GZS0 605 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 GBP3Q9H0R5 595 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 FMNL2Q96PY5 1086 aa5.68□□□□□ -1.5
NEAT1-202ENST00000501122 CCDC92Q53HC0 331 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms