RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 ATF3P18847 181 aa16.9■□□□□ 0.3
SCMH1-217ENST00000498793 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCMH1-217ENST00000498793 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
SCMH1-217ENST00000498793 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
SCMH1-217ENST00000498793 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
SCMH1-217ENST00000498793 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
SCMH1-217ENST00000498793 USP32Q8NFA0 1604 aa16.88■□□□□ 0.29
SCMH1-217ENST00000498793 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
SCMH1-217ENST00000498793 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
SCMH1-217ENST00000498793 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
SCMH1-217ENST00000498793 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
SCMH1-217ENST00000498793 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
SCMH1-217ENST00000498793 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
SCMH1-217ENST00000498793 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
SCMH1-217ENST00000498793 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
SCMH1-217ENST00000498793 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
SCMH1-217ENST00000498793 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
SCMH1-217ENST00000498793 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
SCMH1-217ENST00000498793 ADGRB2O60241 1585 aa16.83■□□□□ 0.28
SCMH1-217ENST00000498793 QRICH2Q9H0J4 1663 aa16.82■□□□□ 0.28
SCMH1-217ENST00000498793 LRP6O75581 1613 aa16.81■□□□□ 0.28
SCMH1-217ENST00000498793 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
SCMH1-217ENST00000498793 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
SCMH1-217ENST00000498793 NBPF8Q3BBV2 869 aa16.79■□□□□ 0.28
SCMH1-217ENST00000498793 ILDR2Q71H61 639 aa16.78■□□□□ 0.28
SCMH1-217ENST00000498793 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
SCMH1-217ENST00000498793 KIF1AQ12756 1690 aa16.77■□□□□ 0.28
SCMH1-217ENST00000498793 POGKQ9P215 609 aa16.76■□□□□ 0.27
SCMH1-217ENST00000498793 PXDNQ92626 1479 aa16.75■□□□□ 0.27
SCMH1-217ENST00000498793 PRR36Q9H6K5 1346 aa16.74■□□□□ 0.27
SCMH1-217ENST00000498793 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
SCMH1-217ENST00000498793 TOPAZ1Q8N9V7 1692 aa16.74■□□□□ 0.27
SCMH1-217ENST00000498793 JCADQ9P266 1359 aa16.74■□□□□ 0.27
SCMH1-217ENST00000498793 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
SCMH1-217ENST00000498793 TULP4Q9NRJ4 1543 aa16.72■□□□□ 0.27
SCMH1-217ENST00000498793 SIRT1Q96EB6 747 aa16.72■□□□□ 0.27
SCMH1-217ENST00000498793 ABCA3Q99758 1704 aa16.71■□□□□ 0.27
SCMH1-217ENST00000498793 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
SCMH1-217ENST00000498793 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
SCMH1-217ENST00000498793 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
SCMH1-217ENST00000498793 TONSLQ96HA7 1378 aa16.71■□□□□ 0.27
SCMH1-217ENST00000498793 ATP7BP35670 1465 aa16.7■□□□□ 0.26
SCMH1-217ENST00000498793 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
SCMH1-217ENST00000498793 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
SCMH1-217ENST00000498793 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
SCMH1-217ENST00000498793 FOXO3O43524 673 aa16.69■□□□□ 0.26
SCMH1-217ENST00000498793 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
SCMH1-217ENST00000498793 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
SCMH1-217ENST00000498793 COL22A1Q8NFW1 1626 aaPredicted RBP16.69■□□□□ 0.26
SCMH1-217ENST00000498793 ROCK2O75116 1388 aaKnown RBP16.68■□□□□ 0.26
SCMH1-217ENST00000498793 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
SCMH1-217ENST00000498793 MARF1Q9Y4F3 1742 aaKnown RBP16.67■□□□□ 0.26
SCMH1-217ENST00000498793 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
SCMH1-217ENST00000498793 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
SCMH1-217ENST00000498793 PHF23Q9BUL5 403 aaPredicted RBP16.66■□□□□ 0.26
SCMH1-217ENST00000498793 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
SCMH1-217ENST00000498793 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
SCMH1-217ENST00000498793 ALS2Q96Q42 1657 aa16.65■□□□□ 0.26
SCMH1-217ENST00000498793 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
SCMH1-217ENST00000498793 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
SCMH1-217ENST00000498793 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
SCMH1-217ENST00000498793 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
SCMH1-217ENST00000498793 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
SCMH1-217ENST00000498793 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
SCMH1-217ENST00000498793 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
SCMH1-217ENST00000498793 POTEAQ6S8J7 498 aa16.6■□□□□ 0.25
SCMH1-217ENST00000498793 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
SCMH1-217ENST00000498793 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
SCMH1-217ENST00000498793 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
SCMH1-217ENST00000498793 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
SCMH1-217ENST00000498793 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
SCMH1-217ENST00000498793 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
SCMH1-217ENST00000498793 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
SCMH1-217ENST00000498793 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
SCMH1-217ENST00000498793 SPATA31A3Q5VYP0 1347 aa16.57■□□□□ 0.24
SCMH1-217ENST00000498793 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
SCMH1-217ENST00000498793 CARD11Q9BXL7 1154 aa16.57■□□□□ 0.24
SCMH1-217ENST00000498793 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
SCMH1-217ENST00000498793 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
SCMH1-217ENST00000498793 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
SCMH1-217ENST00000498793 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
SCMH1-217ENST00000498793 PPIP5K1Q6PFW1 1433 aa16.55■□□□□ 0.24
SCMH1-217ENST00000498793 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
SCMH1-217ENST00000498793 AFF2P51816 1311 aa16.54■□□□□ 0.24
SCMH1-217ENST00000498793 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
SCMH1-217ENST00000498793 LMOD2Q6P5Q4 547 aa16.54■□□□□ 0.24
SCMH1-217ENST00000498793 NRKQ7Z2Y5 1582 aa16.52■□□□□ 0.24
SCMH1-217ENST00000498793 PSME1Q06323 249 aa16.52■□□□□ 0.24
SCMH1-217ENST00000498793 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.24
SCMH1-217ENST00000498793 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
SCMH1-217ENST00000498793 PIK3C2AO00443 1686 aa16.52■□□□□ 0.23
SCMH1-217ENST00000498793 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
SCMH1-217ENST00000498793 ACEP12821 1306 aa16.51■□□□□ 0.23
SCMH1-217ENST00000498793 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
SCMH1-217ENST00000498793 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
SCMH1-217ENST00000498793 NRAPQ86VF7 1730 aa16.5■□□□□ 0.23
SCMH1-217ENST00000498793 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
SCMH1-217ENST00000498793 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
SCMH1-217ENST00000498793 CCDC61Q9Y6R9 512 aa16.48■□□□□ 0.23
SCMH1-217ENST00000498793 USP47Q96K76 1375 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms