RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MIA2Q96PC5 1412 aa9.17□□□□□ -0.94
SPTA1-209ENST00000498708 POTEB3A0JP26 581 aa9.17□□□□□ -0.94
SPTA1-209ENST00000498708 RXRBP28702 533 aa9.17□□□□□ -0.94
SPTA1-209ENST00000498708 ZNF772Q68DY9 489 aaPredicted RBP9.17□□□□□ -0.94
SPTA1-209ENST00000498708 POTEBQ6S5H4 581 aa9.17□□□□□ -0.94
SPTA1-209ENST00000498708 PHLPP1O60346 1717 aa9.17□□□□□ -0.94
SPTA1-209ENST00000498708 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
SPTA1-209ENST00000498708 PZPP20742 1482 aa9.16□□□□□ -0.94
SPTA1-209ENST00000498708 JCADQ9P266 1359 aa9.16□□□□□ -0.94
SPTA1-209ENST00000498708 SPNS2Q8IVW8 549 aa9.16□□□□□ -0.94
SPTA1-209ENST00000498708 RBM33Q96EV2 1170 aaKnown RBP9.16□□□□□ -0.94
SPTA1-209ENST00000498708 SETBP1Q9Y6X0 1596 aa9.16□□□□□ -0.94
SPTA1-209ENST00000498708 NLRP1Q9C000 1473 aa9.15□□□□□ -0.94
SPTA1-209ENST00000498708 GPR153Q6NV75 609 aa9.15□□□□□ -0.94
SPTA1-209ENST00000498708 KIF3CO14782 793 aa9.14□□□□□ -0.95
SPTA1-209ENST00000498708 MEX3CQ5U5Q3 659 aaKnown RBP9.14□□□□□ -0.95
SPTA1-209ENST00000498708 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
SPTA1-209ENST00000498708 ADGBQ8N7X0 1667 aa9.13□□□□□ -0.95
SPTA1-209ENST00000498708 TMEM94Q12767 1356 aa9.13□□□□□ -0.95
SPTA1-209ENST00000498708 C2orf72A6NCS6 295 aa9.13□□□□□ -0.95
SPTA1-209ENST00000498708 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
SPTA1-209ENST00000498708 LTKP29376 864 aa9.13□□□□□ -0.95
SPTA1-209ENST00000498708 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
SPTA1-209ENST00000498708 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
SPTA1-209ENST00000498708 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
SPTA1-209ENST00000498708 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
SPTA1-209ENST00000498708 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
SPTA1-209ENST00000498708 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
SPTA1-209ENST00000498708 CDK12Q9NYV4 1490 aaPredicted RBP9.12□□□□□ -0.95
SPTA1-209ENST00000498708 MAP3K1Q13233 1512 aa9.11□□□□□ -0.95
SPTA1-209ENST00000498708 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
SPTA1-209ENST00000498708 GPATCH8Q9UKJ3 1502 aaKnown RBP9.11□□□□□ -0.95
SPTA1-209ENST00000498708 WASHC2CQ9Y4E1 1318 aa9.11□□□□□ -0.95
SPTA1-209ENST00000498708 KIF3BO15066 747 aa9.11□□□□□ -0.95
SPTA1-209ENST00000498708 RYDENQ9NUL5 291 aaKnown RBP9.11□□□□□ -0.95
SPTA1-209ENST00000498708 COL16A1Q07092 1604 aaPredicted RBP9.11□□□□□ -0.95
SPTA1-209ENST00000498708 EEA1Q15075 1411 aa9.11□□□□□ -0.95
SPTA1-209ENST00000498708 ARSIQ5FYB1 569 aa9.1□□□□□ -0.95
SPTA1-209ENST00000498708 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
SPTA1-209ENST00000498708 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
SPTA1-209ENST00000498708 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
SPTA1-209ENST00000498708 ARHGAP35Q9NRY4 1499 aa9.09□□□□□ -0.95
SPTA1-209ENST00000498708 SPATA31A6Q5VVP1 1343 aa9.09□□□□□ -0.95
SPTA1-209ENST00000498708 RGS12O14924 1447 aa9.09□□□□□ -0.95
SPTA1-209ENST00000498708 KIAA1107Q9UPP5 1409 aa9.09□□□□□ -0.95
SPTA1-209ENST00000498708 PPP1R37O75864 691 aa9.09□□□□□ -0.95
SPTA1-209ENST00000498708 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
SPTA1-209ENST00000498708 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
SPTA1-209ENST00000498708 DHX29Q7Z478 1369 aaKnown RBP9.09□□□□□ -0.95
SPTA1-209ENST00000498708 LRRC9Q6ZRR7 1453 aa9.08□□□□□ -0.96
SPTA1-209ENST00000498708 UBR1Q8IWV7 1749 aa9.08□□□□□ -0.96
SPTA1-209ENST00000498708 NUTM2BA6NNL0 878 aaPredicted RBP9.08□□□□□ -0.96
SPTA1-209ENST00000498708 NUTM2EB1AL46 878 aaPredicted RBP9.08□□□□□ -0.96
SPTA1-209ENST00000498708 SLC34A2O95436 690 aa9.08□□□□□ -0.96
SPTA1-209ENST00000498708 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
SPTA1-209ENST00000498708 NUTM2AQ8IVF1 878 aaPredicted RBP9.08□□□□□ -0.96
SPTA1-209ENST00000498708 NCOA2Q15596 1464 aa9.08□□□□□ -0.96
SPTA1-209ENST00000498708 EP400Q96L91 3159 aa9.07□□□□□ -0.96
SPTA1-209ENST00000498708 ZNF687Q8N1G0 1237 aa9.07□□□□□ -0.96
SPTA1-209ENST00000498708 AFF2P51816 1311 aa9.06□□□□□ -0.96
SPTA1-209ENST00000498708 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-209ENST00000498708 KCNA6P17658 529 aa9.06□□□□□ -0.96
SPTA1-209ENST00000498708 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-209ENST00000498708 SHPRHQ149N8 1683 aa9.06□□□□□ -0.96
SPTA1-209ENST00000498708 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
SPTA1-209ENST00000498708 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
SPTA1-209ENST00000498708 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
SPTA1-209ENST00000498708 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
SPTA1-209ENST00000498708 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-209ENST00000498708 RBM6P78332 1123 aaKnown RBP9.04□□□□□ -0.96
SPTA1-209ENST00000498708 SLC26A8Q96RN1 970 aa9.04□□□□□ -0.96
SPTA1-209ENST00000498708 SLIT1O75093 1534 aa9.04□□□□□ -0.96
SPTA1-209ENST00000498708 PRDM15P57071 1507 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-209ENST00000498708 ERVK-7P63135 1459 aa9.03□□□□□ -0.96
SPTA1-209ENST00000498708 MBD5Q9P267 1494 aa9.03□□□□□ -0.96
SPTA1-209ENST00000498708 MSH6P52701 1360 aa9.03□□□□□ -0.96
SPTA1-209ENST00000498708 RTEL1-TNFRSF6BF6WH68 1400 aa9.03□□□□□ -0.96
SPTA1-209ENST00000498708 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
SPTA1-209ENST00000498708 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPTA1-209ENST00000498708 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
SPTA1-209ENST00000498708 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
SPTA1-209ENST00000498708 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
SPTA1-209ENST00000498708 ATAD2Q6PL18 1390 aa9.01□□□□□ -0.97
SPTA1-209ENST00000498708 DIP2AQ14689 1571 aa9.01□□□□□ -0.97
SPTA1-209ENST00000498708 CCDC18Q5T9S5 1454 aa9.01□□□□□ -0.97
SPTA1-209ENST00000498708 TET3O43151 1660 aa9□□□□□ -0.97
SPTA1-209ENST00000498708 ABCC3O15438 1527 aa9□□□□□ -0.97
SPTA1-209ENST00000498708 NUDT7P0C024 238 aa9□□□□□ -0.97
SPTA1-209ENST00000498708 FOXK1P85037 733 aa9□□□□□ -0.97
SPTA1-209ENST00000498708 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
SPTA1-209ENST00000498708 C8orf37Q96NL8 207 aa9□□□□□ -0.97
SPTA1-209ENST00000498708 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
SPTA1-209ENST00000498708 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
SPTA1-209ENST00000498708 AHDC1Q5TGY3 1603 aaPredicted RBP8.99□□□□□ -0.97
SPTA1-209ENST00000498708 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
SPTA1-209ENST00000498708 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
SPTA1-209ENST00000498708 TMEM2Q9UHN6 1383 aa8.99□□□□□ -0.97
SPTA1-209ENST00000498708 NKTRP30414 1462 aaKnown RBP8.97□□□□□ -0.97
SPTA1-209ENST00000498708 PSDA5PKW4 1024 aaPredicted RBP8.97□□□□□ -0.97
SPTA1-209ENST00000498708 PBX2P40425 430 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms