RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
HMGCL-207ENST00000498698 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
HMGCL-207ENST00000498698 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
HMGCL-207ENST00000498698 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-207ENST00000498698 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-207ENST00000498698 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
HMGCL-207ENST00000498698 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-207ENST00000498698 DCAF11Q8TEB1 546 aa13.88□□□□□ -0.19
HMGCL-207ENST00000498698 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
HMGCL-207ENST00000498698 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
HMGCL-207ENST00000498698 ESCO1Q5FWF5 840 aa13.87□□□□□ -0.19
HMGCL-207ENST00000498698 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
HMGCL-207ENST00000498698 IFT172Q9UG01 1749 aa13.86□□□□□ -0.19
HMGCL-207ENST00000498698 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
HMGCL-207ENST00000498698 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
HMGCL-207ENST00000498698 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
HMGCL-207ENST00000498698 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
HMGCL-207ENST00000498698 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
HMGCL-207ENST00000498698 FOXO3O43524 673 aa13.84□□□□□ -0.19
HMGCL-207ENST00000498698 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
HMGCL-207ENST00000498698 SHPRHQ149N8 1683 aa13.83□□□□□ -0.2
HMGCL-207ENST00000498698 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
HMGCL-207ENST00000498698 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
HMGCL-207ENST00000498698 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
HMGCL-207ENST00000498698 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-207ENST00000498698 POGKQ9P215 609 aa13.81□□□□□ -0.2
HMGCL-207ENST00000498698 LAMC1P11047 1609 aa13.81□□□□□ -0.2
HMGCL-207ENST00000498698 AFF2P51816 1311 aa13.81□□□□□ -0.2
HMGCL-207ENST00000498698 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
HMGCL-207ENST00000498698 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
HMGCL-207ENST00000498698 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
HMGCL-207ENST00000498698 PXDNQ92626 1479 aa13.79□□□□□ -0.2
HMGCL-207ENST00000498698 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
HMGCL-207ENST00000498698 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
HMGCL-207ENST00000498698 RXRBP28702 533 aa13.77□□□□□ -0.21
HMGCL-207ENST00000498698 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
HMGCL-207ENST00000498698 NGLY1Q96IV0 654 aa13.77□□□□□ -0.21
HMGCL-207ENST00000498698 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
HMGCL-207ENST00000498698 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-207ENST00000498698 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-207ENST00000498698 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
HMGCL-207ENST00000498698 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
HMGCL-207ENST00000498698 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-207ENST00000498698 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
HMGCL-207ENST00000498698 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
HMGCL-207ENST00000498698 PSME1Q06323 249 aa13.73□□□□□ -0.21
HMGCL-207ENST00000498698 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
HMGCL-207ENST00000498698 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
HMGCL-207ENST00000498698 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
HMGCL-207ENST00000498698 USP21Q9UK80 565 aa13.72□□□□□ -0.21
HMGCL-207ENST00000498698 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
HMGCL-207ENST00000498698 L3MBTL2Q969R5 705 aa13.71□□□□□ -0.21
HMGCL-207ENST00000498698 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
HMGCL-207ENST00000498698 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
HMGCL-207ENST00000498698 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
HMGCL-207ENST00000498698 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
HMGCL-207ENST00000498698 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-207ENST00000498698 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-207ENST00000498698 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
HMGCL-207ENST00000498698 TNS3Q68CZ2 1445 aa13.68□□□□□ -0.22
HMGCL-207ENST00000498698 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
HMGCL-207ENST00000498698 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
HMGCL-207ENST00000498698 UPF1Q92900 1129 aaKnown RBP eCLIP13.67□□□□□ -0.22
HMGCL-207ENST00000498698 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
HMGCL-207ENST00000498698 CDK19Q9BWU1 502 aa13.67□□□□□ -0.22
HMGCL-207ENST00000498698 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
HMGCL-207ENST00000498698 ATRNO75882 1429 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 ARHGEF10O15013 1369 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
HMGCL-207ENST00000498698 RGS12O14924 1447 aa13.65□□□□□ -0.22
HMGCL-207ENST00000498698 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
HMGCL-207ENST00000498698 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
HMGCL-207ENST00000498698 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
HMGCL-207ENST00000498698 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-207ENST00000498698 UNC5CLQ8IV45 518 aa13.64□□□□□ -0.23
HMGCL-207ENST00000498698 GJD4Q96KN9 370 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-207ENST00000498698 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
HMGCL-207ENST00000498698 SLIT2O94813 1529 aa13.63□□□□□ -0.23
HMGCL-207ENST00000498698 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-207ENST00000498698 ATP7BP35670 1465 aa13.62□□□□□ -0.23
HMGCL-207ENST00000498698 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
HMGCL-207ENST00000498698 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
HMGCL-207ENST00000498698 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-207ENST00000498698 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-207ENST00000498698 NBPF8Q3BBV2 869 aa13.6□□□□□ -0.23
HMGCL-207ENST00000498698 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
HMGCL-207ENST00000498698 ACEP12821 1306 aa13.6□□□□□ -0.23
HMGCL-207ENST00000498698 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
HMGCL-207ENST00000498698 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
HMGCL-207ENST00000498698 SRPK2P78362 688 aaKnown RBP13.59□□□□□ -0.23
HMGCL-207ENST00000498698 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
HMGCL-207ENST00000498698 VPS72Q15906 364 aa13.58□□□□□ -0.24
HMGCL-207ENST00000498698 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
HMGCL-207ENST00000498698 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
HMGCL-207ENST00000498698 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
HMGCL-207ENST00000498698 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-207ENST00000498698 BTG4Q9NY30 223 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms