RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CLIP1P30622 1438 aa9.05□□□□□ -0.96
FXN-205ENST00000498653 DHX29Q7Z478 1369 aaKnown RBP9.04□□□□□ -0.96
FXN-205ENST00000498653 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
FXN-205ENST00000498653 PARD3Q8TEW0 1356 aa9.03□□□□□ -0.96
FXN-205ENST00000498653 FKBP8Q14318 412 aa9.03□□□□□ -0.96
FXN-205ENST00000498653 EFCAB6Q5THR3 1501 aa9.03□□□□□ -0.96
FXN-205ENST00000498653 CROCC2H7BZ55 1655 aa9.03□□□□□ -0.96
FXN-205ENST00000498653 FAM83GA6ND36 823 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
FXN-205ENST00000498653 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
FXN-205ENST00000498653 JMYQ8N9B5 988 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 SYT17Q9BSW7 474 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 FMN1Q68DA7 1419 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 ATP10DQ9P241 1426 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 KIAA1107Q9UPP5 1409 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 CEP152O94986 1710 aa9.02□□□□□ -0.97
FXN-205ENST00000498653 KIF3BO15066 747 aa9.01□□□□□ -0.97
FXN-205ENST00000498653 APLP1P51693 650 aa9.01□□□□□ -0.97
FXN-205ENST00000498653 C14orf37Q86TY3 774 aa9.01□□□□□ -0.97
FXN-205ENST00000498653 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
FXN-205ENST00000498653 AATKQ6ZMQ8 1374 aa9□□□□□ -0.97
FXN-205ENST00000498653 PTGER2P43116 358 aa9□□□□□ -0.97
FXN-205ENST00000498653 UNC5CLQ8IV45 518 aa9□□□□□ -0.97
FXN-205ENST00000498653 PLCH1Q4KWH8 1693 aa8.99□□□□□ -0.97
FXN-205ENST00000498653 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
FXN-205ENST00000498653 TRPM2O94759 1503 aa8.98□□□□□ -0.97
FXN-205ENST00000498653 SOS2Q07890 1332 aaPredicted RBP8.98□□□□□ -0.97
FXN-205ENST00000498653 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
FXN-205ENST00000498653 NWD2Q9ULI1 1742 aa8.97□□□□□ -0.97
FXN-205ENST00000498653 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
FXN-205ENST00000498653 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
FXN-205ENST00000498653 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
FXN-205ENST00000498653 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
FXN-205ENST00000498653 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
FXN-205ENST00000498653 USP32Q8NFA0 1604 aa8.96□□□□□ -0.98
FXN-205ENST00000498653 FAM182BQ5T319 152 aa8.96□□□□□ -0.98
FXN-205ENST00000498653 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.98
FXN-205ENST00000498653 THSD7AQ9UPZ6 1657 aa8.95□□□□□ -0.98
FXN-205ENST00000498653 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
FXN-205ENST00000498653 TNRC18O15417 2968 aaPredicted RBP8.95□□□□□ -0.98
FXN-205ENST00000498653 MAP3K5Q99683 1374 aa8.95□□□□□ -0.98
FXN-205ENST00000498653 NALCNQ8IZF0 1738 aa8.94□□□□□ -0.98
FXN-205ENST00000498653 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
FXN-205ENST00000498653 PDGFDQ9GZP0 370 aaPredicted RBP8.94□□□□□ -0.98
FXN-205ENST00000498653 ADCY9O60503 1353 aa8.94□□□□□ -0.98
FXN-205ENST00000498653 NEXMIFQ5QGS0 1516 aa8.94□□□□□ -0.98
FXN-205ENST00000498653 VPS72Q15906 364 aa8.93□□□□□ -0.98
FXN-205ENST00000498653 NBPF8Q3BBV2 869 aa8.93□□□□□ -0.98
FXN-205ENST00000498653 NBPF14Q5TI25 921 aa8.93□□□□□ -0.98
FXN-205ENST00000498653 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
FXN-205ENST00000498653 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
FXN-205ENST00000498653 PLEKHG1Q9ULL1 1385 aa8.93□□□□□ -0.98
FXN-205ENST00000498653 NRAPQ86VF7 1730 aa8.93□□□□□ -0.98
FXN-205ENST00000498653 XRN1Q8IZH2 1706 aaKnown RBP8.93□□□□□ -0.98
FXN-205ENST00000498653 MBD5Q9P267 1494 aa8.92□□□□□ -0.98
FXN-205ENST00000498653 ABCC5O15440 1437 aa8.91□□□□□ -0.98
FXN-205ENST00000498653 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
FXN-205ENST00000498653 NOS1P29475 1434 aa8.91□□□□□ -0.98
FXN-205ENST00000498653 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
FXN-205ENST00000498653 SGIP1Q9BQI5 828 aa8.91□□□□□ -0.98
FXN-205ENST00000498653 RGPD3A6NKT7 1758 aaPredicted RBP8.91□□□□□ -0.98
FXN-205ENST00000498653 RGPD4Q7Z3J3 1758 aa8.91□□□□□ -0.98
FXN-205ENST00000498653 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 C1orf167Q5SNV9 1468 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 ADAMTS13Q76LX8 1427 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 ZBTB7AO95365 584 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
FXN-205ENST00000498653 GPR162Q16538 588 aa8.9□□□□□ -0.98
FXN-205ENST00000498653 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
FXN-205ENST00000498653 PXDNQ92626 1479 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 ARHGAP31Q2M1Z3 1444 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 KIF3CO14782 793 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 TRIM37O94972 964 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 HTRA3P83110 453 aa8.89□□□□□ -0.99
FXN-205ENST00000498653 ANO8Q9HCE9 1232 aaPredicted RBP8.89□□□□□ -0.99
FXN-205ENST00000498653 ADGRL3Q9HAR2 1447 aa8.88□□□□□ -0.99
FXN-205ENST00000498653 APBA3O96018 575 aa8.88□□□□□ -0.99
FXN-205ENST00000498653 PIK3R4Q99570 1358 aa8.87□□□□□ -0.99
FXN-205ENST00000498653 EIF2AK4Q9P2K8 1649 aaKnown RBP8.87□□□□□ -0.99
FXN-205ENST00000498653 HSPA1AP0DMV8 641 aaKnown RBP8.87□□□□□ -0.99
FXN-205ENST00000498653 HSPA1BP0DMV9 641 aaKnown RBP8.87□□□□□ -0.99
FXN-205ENST00000498653 ABCA3Q99758 1704 aa8.86□□□□□ -0.99
FXN-205ENST00000498653 A0A0G2JS52 829 aa8.86□□□□□ -0.99
FXN-205ENST00000498653 MYT1Q01538 1121 aa8.86□□□□□ -0.99
FXN-205ENST00000498653 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
FXN-205ENST00000498653 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
FXN-205ENST00000498653 PDE4DIPQ5VU43 2346 aa8.86□□□□□ -0.99
FXN-205ENST00000498653 ADGRL2O95490 1459 aa8.85□□□□□ -0.99
FXN-205ENST00000498653 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
FXN-205ENST00000498653 SSUH2Q9Y2M2 353 aa8.85□□□□□ -0.99
FXN-205ENST00000498653 MLLT1Q03111 559 aaPredicted RBP8.84□□□□□ -0.99
FXN-205ENST00000498653 BCANQ96GW7 911 aa8.84□□□□□ -0.99
FXN-205ENST00000498653 STAG3Q9UJ98 1225 aa8.84□□□□□ -0.99
FXN-205ENST00000498653 ATP1B4Q9UN42 357 aaPredicted RBP8.83□□□□□ -1
FXN-205ENST00000498653 CCDC9Q9Y3X0 531 aaKnown RBP8.83□□□□□ -1
FXN-205ENST00000498653 IDI1Q13907 227 aa8.82□□□□□ -1
FXN-205ENST00000498653 ARHGEF28Q8N1W1 1705 aaKnown RBP8.82□□□□□ -1
FXN-205ENST00000498653 GCC2Q8IWJ2 1684 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms