RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 NBPF8Q3BBV2 869 aa28.34■■■□□ 2.13
HLA-B-255ENST00000498007 CADPS2Q86UW7 1296 aa28.34■■■□□ 2.13
HLA-B-255ENST00000498007 SAFB2Q14151 953 aaKnown RBP eCLIP28.33■■■□□ 2.13
HLA-B-255ENST00000498007 CDC42BPGQ6DT37 1551 aa28.33■■■□□ 2.12
HLA-B-255ENST00000498007 ROBO1Q9Y6N7 1651 aa28.32■■■□□ 2.12
HLA-B-255ENST00000498007 POGKQ9P215 609 aa28.32■■■□□ 2.12
HLA-B-255ENST00000498007 ROCK2O75116 1388 aaKnown RBP28.32■■■□□ 2.12
HLA-B-255ENST00000498007 SIRT1Q96EB6 747 aa28.31■■■□□ 2.12
HLA-B-255ENST00000498007 RALGAPBQ86X10 1494 aa28.29■■■□□ 2.12
HLA-B-255ENST00000498007 SLAIN2Q9P270 581 aa28.29■■■□□ 2.12
HLA-B-255ENST00000498007 MST1RQ04912 1400 aa28.27■■■□□ 2.12
HLA-B-255ENST00000498007 ADGRB2O60241 1585 aa28.24■■■□□ 2.11
HLA-B-255ENST00000498007 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
HLA-B-255ENST00000498007 TIMELESSQ9UNS1 1208 aa28.23■■■□□ 2.11
HLA-B-255ENST00000498007 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
HLA-B-255ENST00000498007 QRICH2Q9H0J4 1663 aa28.21■■■□□ 2.11
HLA-B-255ENST00000498007 GPRASP1Q5JY77 1395 aa28.21■■■□□ 2.11
HLA-B-255ENST00000498007 HIRIP3Q9BW71 556 aaPredicted RBP28.2■■■□□ 2.1
HLA-B-255ENST00000498007 C1orf167Q5SNV9 1468 aa28.2■■■□□ 2.1
HLA-B-255ENST00000498007 HSPA1LP34931 641 aa28.18■■■□□ 2.1
HLA-B-255ENST00000498007 CARD11Q9BXL7 1154 aa28.18■■■□□ 2.1
HLA-B-255ENST00000498007 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
HLA-B-255ENST00000498007 CENPJQ9HC77 1338 aaPredicted RBP28.16■■■□□ 2.1
HLA-B-255ENST00000498007 PHLPP1O60346 1717 aa28.15■■■□□ 2.1
HLA-B-255ENST00000498007 EIF3AQ14152 1382 aaKnown RBP28.15■■■□□ 2.1
HLA-B-255ENST00000498007 BRINP3Q76B58 766 aa28.15■■■□□ 2.1
HLA-B-255ENST00000498007 RGPD8O14715 1765 aaPredicted RBP28.12■■■□□ 2.09
HLA-B-255ENST00000498007 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
HLA-B-255ENST00000498007 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
HLA-B-255ENST00000498007 USP32Q8NFA0 1604 aa28.1■■■□□ 2.09
HLA-B-255ENST00000498007 ORAI2Q96SN7 254 aa28.09■■■□□ 2.09
HLA-B-255ENST00000498007 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
HLA-B-255ENST00000498007 WASLO00401 505 aaPredicted RBP28.07■■■□□ 2.08
HLA-B-255ENST00000498007 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
HLA-B-255ENST00000498007 COL16A1Q07092 1604 aaPredicted RBP28.07■■■□□ 2.08
HLA-B-255ENST00000498007 ANKARQ7Z5J8 1434 aa28.06■■■□□ 2.08
HLA-B-255ENST00000498007 KIF1AQ12756 1690 aa28.06■■■□□ 2.08
HLA-B-255ENST00000498007 DDX17Q92841 729 aaKnown RBP28.03■■■□□ 2.08
HLA-B-255ENST00000498007 ITSN1Q15811 1721 aa28.03■■■□□ 2.08
HLA-B-255ENST00000498007 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
HLA-B-255ENST00000498007 ATP7BP35670 1465 aa28.01■■■□□ 2.07
HLA-B-255ENST00000498007 PRR36Q9H6K5 1346 aa28■■■□□ 2.07
HLA-B-255ENST00000498007 USP47Q96K76 1375 aa27.99■■■□□ 2.07
HLA-B-255ENST00000498007 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
HLA-B-255ENST00000498007 SRPK2P78362 688 aaKnown RBP27.97■■■□□ 2.07
HLA-B-255ENST00000498007 PHF8Q9UPP1 1060 aa27.96■■■□□ 2.07
HLA-B-255ENST00000498007 NPHP3Q7Z494 1330 aa27.94■■■□□ 2.06
HLA-B-255ENST00000498007 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
HLA-B-255ENST00000498007 FOXO3O43524 673 aa27.94■■■□□ 2.06
HLA-B-255ENST00000498007 NUDT16Q96DE0 195 aaKnown RBP27.94■■■□□ 2.06
HLA-B-255ENST00000498007 CABP2Q9NPB3 220 aa27.94■■■□□ 2.06
HLA-B-255ENST00000498007 SBNO2Q9Y2G9 1366 aa27.94■■■□□ 2.06
HLA-B-255ENST00000498007 PMFBP1Q8TBY8 1022 aa27.93■■■□□ 2.06
HLA-B-255ENST00000498007 PXDNQ92626 1479 aa27.92■■■□□ 2.06
HLA-B-255ENST00000498007 ST20-MTHFSA0A0A6YYL1 179 aa27.92■■■□□ 2.06
HLA-B-255ENST00000498007 XPCQ01831 940 aaPredicted RBP27.92■■■□□ 2.06
HLA-B-255ENST00000498007 SHPRHQ149N8 1683 aa27.91■■■□□ 2.06
HLA-B-255ENST00000498007 JCADQ9P266 1359 aa27.89■■■□□ 2.06
HLA-B-255ENST00000498007 SOS2Q07890 1332 aaPredicted RBP27.89■■■□□ 2.05
HLA-B-255ENST00000498007 PPIP5K1Q6PFW1 1433 aa27.86■■■□□ 2.05
HLA-B-255ENST00000498007 LRRC59Q96AG4 307 aaKnown RBP27.85■■■□□ 2.05
HLA-B-255ENST00000498007 CCDC61Q9Y6R9 512 aa27.85■■■□□ 2.05
HLA-B-255ENST00000498007 NGDNQ8NEJ9 315 aaKnown RBP27.84■■■□□ 2.05
HLA-B-255ENST00000498007 TESK2Q96S53 571 aa27.84■■■□□ 2.05
HLA-B-255ENST00000498007 MED1Q15648 1581 aaPredicted RBP27.83■■■□□ 2.05
HLA-B-255ENST00000498007 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
HLA-B-255ENST00000498007 PSME1Q06323 249 aa27.82■■■□□ 2.04
HLA-B-255ENST00000498007 ATAD2Q6PL18 1390 aa27.81■■■□□ 2.04
HLA-B-255ENST00000498007 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
HLA-B-255ENST00000498007 TRPM3Q9HCF6 1732 aaPredicted RBP27.81■■■□□ 2.04
HLA-B-255ENST00000498007 DISP3Q9P2K9 1392 aa27.78■■■□□ 2.04
HLA-B-255ENST00000498007 ACEP12821 1306 aa27.78■■■□□ 2.04
HLA-B-255ENST00000498007 TNS3Q68CZ2 1445 aa27.77■■■□□ 2.04
HLA-B-255ENST00000498007 POLR3AO14802 1390 aaPredicted RBP27.77■■■□□ 2.04
HLA-B-255ENST00000498007 PLEKHG3A1L390 1219 aa27.77■■■□□ 2.04
HLA-B-255ENST00000498007 EIF4G2P78344 907 aaKnown RBP eCLIP27.77■■■□□ 2.04
HLA-B-255ENST00000498007 CABP1Q9NZU7 370 aa27.77■■■□□ 2.04
HLA-B-255ENST00000498007 COL22A1Q8NFW1 1626 aaPredicted RBP27.77■■■□□ 2.04
HLA-B-255ENST00000498007 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
HLA-B-255ENST00000498007 SLC24A1O60721 1099 aa27.75■■■□□ 2.03
HLA-B-255ENST00000498007 HSPA5P11021 654 aaKnown RBP27.75■■■□□ 2.03
HLA-B-255ENST00000498007 TMF1P82094 1093 aa27.75■■■□□ 2.03
HLA-B-255ENST00000498007 SBNO1A3KN83 1393 aa27.74■■■□□ 2.03
HLA-B-255ENST00000498007 LRP6O75581 1613 aa27.74■■■□□ 2.03
HLA-B-255ENST00000498007 SPATA31A3Q5VYP0 1347 aa27.74■■■□□ 2.03
HLA-B-255ENST00000498007 ALS2Q96Q42 1657 aa27.73■■■□□ 2.03
HLA-B-255ENST00000498007 NUTM2BA6NNL0 878 aaPredicted RBP27.73■■■□□ 2.03
HLA-B-255ENST00000498007 NUTM2EB1AL46 878 aaPredicted RBP27.73■■■□□ 2.03
HLA-B-255ENST00000498007 LMOD2Q6P5Q4 547 aa27.73■■■□□ 2.03
HLA-B-255ENST00000498007 NUTM2AQ8IVF1 878 aaPredicted RBP27.73■■■□□ 2.03
HLA-B-255ENST00000498007 AKAP12Q02952 1782 aa27.73■■■□□ 2.03
HLA-B-255ENST00000498007 PAK3O75914 559 aaPredicted RBP27.71■■■□□ 2.03
HLA-B-255ENST00000498007 TMC1Q8TDI8 760 aa27.7■■■□□ 2.02
HLA-B-255ENST00000498007 PLEKHG5O94827 1062 aa27.68■■■□□ 2.02
HLA-B-255ENST00000498007 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
HLA-B-255ENST00000498007 MON2Q7Z3U7 1717 aa27.67■■■□□ 2.02
HLA-B-255ENST00000498007 ABCA3Q99758 1704 aa27.67■■■□□ 2.02
HLA-B-255ENST00000498007 USP6P35125 1406 aa27.67■■■□□ 2.02
HLA-B-255ENST00000498007 MEX3CQ5U5Q3 659 aaKnown RBP27.66■■■□□ 2.02
HLA-B-255ENST00000498007 PUS7Q96PZ0 661 aaKnown RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms