RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 CDC45O75419 566 aa8.83□□□□□ -1
MACF1-226ENST00000497964 LMOD3Q0VAK6 560 aa8.83□□□□□ -1
MACF1-226ENST00000497964 WDR63Q8IWG1 891 aa8.83□□□□□ -1
MACF1-226ENST00000497964 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
MACF1-226ENST00000497964 XRCC6P12956 609 aaKnown RBP eCLIP8.83□□□□□ -1
MACF1-226ENST00000497964 PLEKHH1Q9ULM0 1364 aa8.83□□□□□ -1
MACF1-226ENST00000497964 PRKAR2BP31323 418 aa8.83□□□□□ -1
MACF1-226ENST00000497964 API5Q9BZZ5 524 aaKnown RBP8.83□□□□□ -1
MACF1-226ENST00000497964 PLB1Q6P1J6 1458 aa8.82□□□□□ -1
MACF1-226ENST00000497964 INTS3Q68E01 1043 aaKnown RBP8.82□□□□□ -1
MACF1-226ENST00000497964 SSH1Q8WYL5 1049 aa8.82□□□□□ -1
MACF1-226ENST00000497964 STAC3Q96MF2 364 aa8.82□□□□□ -1
MACF1-226ENST00000497964 CHD1LQ86WJ1 897 aa8.82□□□□□ -1
MACF1-226ENST00000497964 TBC1D32Q96NH3 1257 aa8.82□□□□□ -1
MACF1-226ENST00000497964 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
MACF1-226ENST00000497964 THOC2Q8NI27 1593 aaKnown RBP8.82□□□□□ -1
MACF1-226ENST00000497964 PARD3Q8TEW0 1356 aa8.82□□□□□ -1
MACF1-226ENST00000497964 K7ELQ4 463 aaPredicted RBP8.82□□□□□ -1
MACF1-226ENST00000497964 PHF14O94880 888 aa8.82□□□□□ -1
MACF1-226ENST00000497964 CDK11BP21127 795 aaKnown RBP8.82□□□□□ -1
MACF1-226ENST00000497964 NEK4P51957 841 aa8.82□□□□□ -1
MACF1-226ENST00000497964 ARHGEF11O15085 1522 aa8.81□□□□□ -1
MACF1-226ENST00000497964 LTV1Q96GA3 475 aaPredicted RBP8.81□□□□□ -1
MACF1-226ENST00000497964 THUMPD2Q9BTF0 503 aaKnown RBP8.81□□□□□ -1
MACF1-226ENST00000497964 UGGT2Q9NYU1 1516 aa8.81□□□□□ -1
MACF1-226ENST00000497964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
MACF1-226ENST00000497964 GNAI1P63096 354 aa8.8□□□□□ -1
MACF1-226ENST00000497964 TESK2Q96S53 571 aa8.8□□□□□ -1
MACF1-226ENST00000497964 CCDC173Q0VFZ6 552 aa8.8□□□□□ -1
MACF1-226ENST00000497964 TNPO1Q92973 898 aaKnown RBP8.8□□□□□ -1
MACF1-226ENST00000497964 ARHGAP5Q13017 1502 aa8.8□□□□□ -1
MACF1-226ENST00000497964 RLBP1P12271 317 aa8.8□□□□□ -1
MACF1-226ENST00000497964 TRIM27P14373 513 aa8.79□□□□□ -1
MACF1-226ENST00000497964 COG3Q96JB2 828 aa8.79□□□□□ -1
MACF1-226ENST00000497964 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
MACF1-226ENST00000497964 TMPOP42166 694 aaKnown RBP8.79□□□□□ -1
MACF1-226ENST00000497964 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
MACF1-226ENST00000497964 IQGAP2Q13576 1575 aa8.79□□□□□ -1
MACF1-226ENST00000497964 SSFA2P28290 1259 aa8.79□□□□□ -1
MACF1-226ENST00000497964 TWISTNBQ3B726 338 aaPredicted RBP8.79□□□□□ -1
MACF1-226ENST00000497964 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.79□□□□□ -1
MACF1-226ENST00000497964 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
MACF1-226ENST00000497964 GOLGA6L6A8MZA4 724 aa8.78□□□□□ -1
MACF1-226ENST00000497964 RRP9O43818 475 aaKnown RBP8.78□□□□□ -1
MACF1-226ENST00000497964 TPM2P07951 284 aa8.78□□□□□ -1
MACF1-226ENST00000497964 GCC1Q96CN9 775 aa8.78□□□□□ -1
MACF1-226ENST00000497964 NSD3Q9BZ95 1437 aa8.78□□□□□ -1
MACF1-226ENST00000497964 PLEKHH2Q8IVE3 1493 aa8.78□□□□□ -1
MACF1-226ENST00000497964 NRDCO43847 1150 aa8.78□□□□□ -1
MACF1-226ENST00000497964 RABEP1Q15276 862 aa8.78□□□□□ -1
MACF1-226ENST00000497964 RRAGDQ9NQL2 400 aaPredicted RBP8.78□□□□□ -1
MACF1-226ENST00000497964 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
MACF1-226ENST00000497964 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
MACF1-226ENST00000497964 ISY1Q9ULR0 285 aaKnown RBP8.78□□□□□ -1
MACF1-226ENST00000497964 A0A0G2JS52 829 aa8.77□□□□□ -1
MACF1-226ENST00000497964 VPS37CA5D8V6 355 aaPredicted RBP8.77□□□□□ -1
MACF1-226ENST00000497964 AMPHP49418 695 aa8.77□□□□□ -1
MACF1-226ENST00000497964 DMRT2Q9Y5R5 561 aa8.77□□□□□ -1
MACF1-226ENST00000497964 ZNF592Q92610 1267 aa8.77□□□□□ -1.01
MACF1-226ENST00000497964 RALGAPBQ86X10 1494 aa8.77□□□□□ -1.01
MACF1-226ENST00000497964 KDM2BQ8NHM5 1336 aa8.77□□□□□ -1.01
MACF1-226ENST00000497964 CUL7Q14999 1698 aa8.77□□□□□ -1.01
MACF1-226ENST00000497964 CIZ1Q9ULV3 898 aaPredicted RBP8.77□□□□□ -1.01
MACF1-226ENST00000497964 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1.01
MACF1-226ENST00000497964 CCDC27Q2M243 656 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 ZSCAN30Q86W11 494 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 SPATA31E1Q6ZUB1 1445 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 EIF2S2P20042 333 aaKnown RBP8.76□□□□□ -1.01
MACF1-226ENST00000497964 SYNJ2O15056 1496 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 TEX14Q8IWB6 1497 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 CFAP43Q8NDM7 1665 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 KIAA0586Q9BVV6 1533 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 ADGRF5Q8IZF2 1346 aa8.76□□□□□ -1.01
MACF1-226ENST00000497964 XPCQ01831 940 aaPredicted RBP8.76□□□□□ -1.01
MACF1-226ENST00000497964 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
MACF1-226ENST00000497964 CCDC9Q9Y3X0 531 aaKnown RBP8.76□□□□□ -1.01
MACF1-226ENST00000497964 GPATCH8Q9UKJ3 1502 aaKnown RBP8.76□□□□□ -1.01
MACF1-226ENST00000497964 SYCE3A1L190 88 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 HSP90B1P14625 803 aaKnown RBP8.75□□□□□ -1.01
MACF1-226ENST00000497964 PRAM1Q96QH2 718 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 ATP6V1DQ9Y5K8 247 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 UQCRHLA0A096LP55 91 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 UQCRHP07919 91 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
MACF1-226ENST00000497964 CLCN1P35523 988 aa8.75□□□□□ -1.01
MACF1-226ENST00000497964 NGDNQ8NEJ9 315 aaKnown RBP8.75□□□□□ -1.01
MACF1-226ENST00000497964 URB2Q14146 1524 aaKnown RBP8.74□□□□□ -1.01
MACF1-226ENST00000497964 FIBPO43427 364 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 DIAPH3Q9NSV4 1193 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 SMC3Q9UQE7 1217 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 ZMYND15Q9H091 742 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 GPRASP1Q5JY77 1395 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 SCAPERQ9BY12 1400 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 MBD3O95983 291 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 TSPYL4Q9UJ04 414 aa8.74□□□□□ -1.01
MACF1-226ENST00000497964 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
MACF1-226ENST00000497964 DCTN1Q14203 1278 aa8.73□□□□□ -1.01
MACF1-226ENST00000497964 SMARCA5O60264 1052 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms