RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 FAM135BQ49AJ0 1406 aa22.24■■□□□ 1.15
PTK7-220ENST00000497957 RBM33Q96EV2 1170 aaKnown RBP22.24■■□□□ 1.15
PTK7-220ENST00000497957 PIK3R4Q99570 1358 aa22.24■■□□□ 1.15
PTK7-220ENST00000497957 STRCP1A6NGW2 1772 aa22.23■■□□□ 1.15
PTK7-220ENST00000497957 SIRT1Q96EB6 747 aa22.22■■□□□ 1.15
PTK7-220ENST00000497957 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
PTK7-220ENST00000497957 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
PTK7-220ENST00000497957 MYOM1P52179 1685 aa22.2■■□□□ 1.15
PTK7-220ENST00000497957 CABP2Q9NPB3 220 aa22.2■■□□□ 1.14
PTK7-220ENST00000497957 EVC2Q86UK5 1308 aa22.16■■□□□ 1.14
PTK7-220ENST00000497957 CDK19Q9BWU1 502 aa22.16■■□□□ 1.14
PTK7-220ENST00000497957 NALCNQ8IZF0 1738 aa22.13■■□□□ 1.13
PTK7-220ENST00000497957 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
PTK7-220ENST00000497957 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
PTK7-220ENST00000497957 WASLO00401 505 aaPredicted RBP22.12■■□□□ 1.13
PTK7-220ENST00000497957 SRPK2P78362 688 aaKnown RBP22.12■■□□□ 1.13
PTK7-220ENST00000497957 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
PTK7-220ENST00000497957 SLC12A5Q9H2X9 1139 aa22.1■■□□□ 1.13
PTK7-220ENST00000497957 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
PTK7-220ENST00000497957 CDCA8Q53HL2 280 aa22.09■■□□□ 1.13
PTK7-220ENST00000497957 PROSER2Q86WR7 435 aaPredicted RBP22.09■■□□□ 1.13
PTK7-220ENST00000497957 PANK3Q9H999 370 aa22.09■■□□□ 1.13
PTK7-220ENST00000497957 MIER1Q8N108 512 aa22.08■■□□□ 1.13
PTK7-220ENST00000497957 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
PTK7-220ENST00000497957 NKTRP30414 1462 aaKnown RBP22.07■■□□□ 1.12
PTK7-220ENST00000497957 USP32Q8NFA0 1604 aa22.06■■□□□ 1.12
PTK7-220ENST00000497957 SLC24A1O60721 1099 aa22.06■■□□□ 1.12
PTK7-220ENST00000497957 CNGB1Q14028 1251 aaPredicted RBP22.05■■□□□ 1.12
PTK7-220ENST00000497957 ATP7BP35670 1465 aa22.04■■□□□ 1.12
PTK7-220ENST00000497957 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
PTK7-220ENST00000497957 ADGRL3Q9HAR2 1447 aa22.04■■□□□ 1.12
PTK7-220ENST00000497957 XIRP1Q702N8 1843 aaKnown RBP22.03■■□□□ 1.12
PTK7-220ENST00000497957 TMEM94Q12767 1356 aa22.03■■□□□ 1.12
PTK7-220ENST00000497957 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
PTK7-220ENST00000497957 PUS7Q96PZ0 661 aaKnown RBP22.03■■□□□ 1.12
PTK7-220ENST00000497957 CARD14Q9BXL6 1004 aa22.03■■□□□ 1.12
PTK7-220ENST00000497957 FMN2Q9NZ56 1722 aa22.03■■□□□ 1.12
PTK7-220ENST00000497957 PER1O15534 1290 aaPredicted RBP22.02■■□□□ 1.12
PTK7-220ENST00000497957 CD163L1Q9NR16 1453 aa22.02■■□□□ 1.12
PTK7-220ENST00000497957 ATAD2Q6PL18 1390 aa22.01■■□□□ 1.11
PTK7-220ENST00000497957 CABP1Q9NZU7 370 aa22.01■■□□□ 1.11
PTK7-220ENST00000497957 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
PTK7-220ENST00000497957 LRRC7Q96NW7 1537 aa22.01■■□□□ 1.11
PTK7-220ENST00000497957 CDC42BPGQ6DT37 1551 aa22■■□□□ 1.11
PTK7-220ENST00000497957 C14orf37Q86TY3 774 aa22■■□□□ 1.11
PTK7-220ENST00000497957 TOPAZ1Q8N9V7 1692 aa22■■□□□ 1.11
PTK7-220ENST00000497957 PPIP5K1Q6PFW1 1433 aa21.98■■□□□ 1.11
PTK7-220ENST00000497957 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
PTK7-220ENST00000497957 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
PTK7-220ENST00000497957 NSD3Q9BZ95 1437 aa21.95■■□□□ 1.1
PTK7-220ENST00000497957 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
PTK7-220ENST00000497957 CCDC61Q9Y6R9 512 aa21.93■■□□□ 1.1
PTK7-220ENST00000497957 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
PTK7-220ENST00000497957 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
PTK7-220ENST00000497957 ANP32CO43423 234 aa21.91■■□□□ 1.1
PTK7-220ENST00000497957 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
PTK7-220ENST00000497957 CC2D1BQ5T0F9 858 aaKnown RBP21.91■■□□□ 1.1
PTK7-220ENST00000497957 ANKARQ7Z5J8 1434 aa21.9■■□□□ 1.1
PTK7-220ENST00000497957 NINLQ9Y2I6 1382 aa21.9■■□□□ 1.1
PTK7-220ENST00000497957 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
PTK7-220ENST00000497957 CPSF1Q10570 1443 aaKnown RBP21.89■■□□□ 1.1
PTK7-220ENST00000497957 AKAP12Q02952 1782 aa21.89■■□□□ 1.1
PTK7-220ENST00000497957 PRKRIP1Q9H875 184 aaPredicted RBP21.89■■□□□ 1.09
PTK7-220ENST00000497957 ITSN1Q15811 1721 aa21.89■■□□□ 1.09
PTK7-220ENST00000497957 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
PTK7-220ENST00000497957 ACEP12821 1306 aa21.88■■□□□ 1.09
PTK7-220ENST00000497957 PLEKHG3A1L390 1219 aa21.88■■□□□ 1.09
PTK7-220ENST00000497957 KNSTRNQ9Y448 316 aa21.88■■□□□ 1.09
PTK7-220ENST00000497957 ORAI2Q96SN7 254 aa21.87■■□□□ 1.09
PTK7-220ENST00000497957 MST1RQ04912 1400 aa21.87■■□□□ 1.09
PTK7-220ENST00000497957 MON2Q7Z3U7 1717 aa21.86■■□□□ 1.09
PTK7-220ENST00000497957 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
PTK7-220ENST00000497957 HDGFL2Q7Z4V5 671 aaPredicted RBP21.86■■□□□ 1.09
PTK7-220ENST00000497957 TERF2IPQ9NYB0 399 aa21.86■■□□□ 1.09
PTK7-220ENST00000497957 CCDC184Q52MB2 194 aa21.85■■□□□ 1.09
PTK7-220ENST00000497957 MSH6P52701 1360 aa21.85■■□□□ 1.09
PTK7-220ENST00000497957 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
PTK7-220ENST00000497957 ATF3P18847 181 aa21.83■■□□□ 1.09
PTK7-220ENST00000497957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.83■■□□□ 1.09
PTK7-220ENST00000497957 ZRANB1Q9UGI0 708 aa21.83■■□□□ 1.09
PTK7-220ENST00000497957 NRKQ7Z2Y5 1582 aa21.82■■□□□ 1.08
PTK7-220ENST00000497957 DCCP43146 1447 aa21.82■■□□□ 1.08
PTK7-220ENST00000497957 ESCO1Q5FWF5 840 aa21.82■■□□□ 1.08
PTK7-220ENST00000497957 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
PTK7-220ENST00000497957 POLR3AO14802 1390 aaPredicted RBP21.82■■□□□ 1.08
PTK7-220ENST00000497957 PARD3Q8TEW0 1356 aa21.82■■□□□ 1.08
PTK7-220ENST00000497957 NGDNQ8NEJ9 315 aaKnown RBP21.8■■□□□ 1.08
PTK7-220ENST00000497957 GGNBP2Q9H3C7 697 aa21.8■■□□□ 1.08
PTK7-220ENST00000497957 USP6P35125 1406 aa21.8■■□□□ 1.08
PTK7-220ENST00000497957 NME9Q86XW9 330 aa21.79■■□□□ 1.08
PTK7-220ENST00000497957 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
PTK7-220ENST00000497957 EDC4Q6P2E9 1401 aaKnown RBP21.79■■□□□ 1.08
PTK7-220ENST00000497957 KIF20BQ96Q89 1820 aa21.78■■□□□ 1.08
PTK7-220ENST00000497957 NPC1L1Q9UHC9 1359 aa21.78■■□□□ 1.08
PTK7-220ENST00000497957 FYB1O15117 783 aa21.78■■□□□ 1.08
PTK7-220ENST00000497957 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
PTK7-220ENST00000497957 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
PTK7-220ENST00000497957 CADPS2Q86UW7 1296 aa21.77■■□□□ 1.08
PTK7-220ENST00000497957 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.07
PTK7-220ENST00000497957 TTC21BQ7Z4L5 1316 aa21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms