RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 POLR3GLQ9BT43 218 aa33.8■■■■□ 3
TNFRSF4-203ENST00000497869 CHD2O14647 1828 aaKnown RBP33.79■■■■□ 3
TNFRSF4-203ENST00000497869 DIEXFQ68CQ4 756 aaKnown RBP33.73■■■□□ 2.99
TNFRSF4-203ENST00000497869 NWD1Q149M9 1564 aa33.72■■■□□ 2.99
TNFRSF4-203ENST00000497869 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.72■■■□□ 2.99
TNFRSF4-203ENST00000497869 RBM33Q96EV2 1170 aaKnown RBP33.71■■■□□ 2.99
TNFRSF4-203ENST00000497869 SLC24A1O60721 1099 aa33.69■■■□□ 2.98
TNFRSF4-203ENST00000497869 EVC2Q86UK5 1308 aa33.68■■■□□ 2.98
TNFRSF4-203ENST00000497869 CABP2Q9NPB3 220 aa33.68■■■□□ 2.98
TNFRSF4-203ENST00000497869 STRCP1A6NGW2 1772 aa33.66■■■□□ 2.98
TNFRSF4-203ENST00000497869 CDK19Q9BWU1 502 aa33.66■■■□□ 2.98
TNFRSF4-203ENST00000497869 CDCA8Q53HL2 280 aa33.65■■■□□ 2.98
TNFRSF4-203ENST00000497869 WASLO00401 505 aaPredicted RBP33.62■■■□□ 2.97
TNFRSF4-203ENST00000497869 ZNF335Q9H4Z2 1342 aaPredicted RBP33.61■■■□□ 2.97
TNFRSF4-203ENST00000497869 ADGRB2O60241 1585 aa33.6■■■□□ 2.97
TNFRSF4-203ENST00000497869 SRPK2P78362 688 aaKnown RBP33.59■■■□□ 2.97
TNFRSF4-203ENST00000497869 PUS7Q96PZ0 661 aaKnown RBP33.59■■■□□ 2.97
TNFRSF4-203ENST00000497869 NKTRP30414 1462 aaKnown RBP33.58■■■□□ 2.97
TNFRSF4-203ENST00000497869 MYOM1P52179 1685 aa33.58■■■□□ 2.97
TNFRSF4-203ENST00000497869 PROSER2Q86WR7 435 aaPredicted RBP33.55■■■□□ 2.96
TNFRSF4-203ENST00000497869 SLC12A5Q9H2X9 1139 aa33.55■■■□□ 2.96
TNFRSF4-203ENST00000497869 PRR36Q9H6K5 1346 aa33.54■■■□□ 2.96
TNFRSF4-203ENST00000497869 DMRT2Q9Y5R5 561 aa33.54■■■□□ 2.96
TNFRSF4-203ENST00000497869 AEBP2Q6ZN18 517 aaPredicted RBP33.53■■■□□ 2.96
TNFRSF4-203ENST00000497869 PANK3Q9H999 370 aa33.53■■■□□ 2.96
TNFRSF4-203ENST00000497869 NALCNQ8IZF0 1738 aa33.52■■■□□ 2.96
TNFRSF4-203ENST00000497869 ADGRL3Q9HAR2 1447 aa33.5■■■□□ 2.95
TNFRSF4-203ENST00000497869 TMEM94Q12767 1356 aa33.5■■■□□ 2.95
TNFRSF4-203ENST00000497869 NUTM2FA1L443 756 aa33.48■■■□□ 2.95
TNFRSF4-203ENST00000497869 TMC1Q8TDI8 760 aa33.48■■■□□ 2.95
TNFRSF4-203ENST00000497869 ATAD2Q6PL18 1390 aa33.48■■■□□ 2.95
TNFRSF4-203ENST00000497869 PER1O15534 1290 aaPredicted RBP33.48■■■□□ 2.95
TNFRSF4-203ENST00000497869 NUDT16Q96DE0 195 aaKnown RBP33.48■■■□□ 2.95
TNFRSF4-203ENST00000497869 ATP7BP35670 1465 aa33.47■■■□□ 2.95
TNFRSF4-203ENST00000497869 CARD14Q9BXL6 1004 aa33.44■■■□□ 2.94
TNFRSF4-203ENST00000497869 CABP1Q9NZU7 370 aa33.44■■■□□ 2.94
TNFRSF4-203ENST00000497869 LRRC7Q96NW7 1537 aa33.44■■■□□ 2.94
TNFRSF4-203ENST00000497869 USP32Q8NFA0 1604 aa33.43■■■□□ 2.94
TNFRSF4-203ENST00000497869 CD163L1Q9NR16 1453 aa33.42■■■□□ 2.94
TNFRSF4-203ENST00000497869 CDC42BPGQ6DT37 1551 aa33.42■■■□□ 2.94
TNFRSF4-203ENST00000497869 MIER1Q8N108 512 aa33.41■■■□□ 2.94
TNFRSF4-203ENST00000497869 C14orf37Q86TY3 774 aa33.4■■■□□ 2.94
TNFRSF4-203ENST00000497869 CCDC61Q9Y6R9 512 aa33.39■■■□□ 2.94
TNFRSF4-203ENST00000497869 PPIP5K1Q6PFW1 1433 aa33.38■■■□□ 2.93
TNFRSF4-203ENST00000497869 NCOA3Q9Y6Q9 1424 aa33.37■■■□□ 2.93
TNFRSF4-203ENST00000497869 C19orf44Q9H6X5 657 aa33.36■■■□□ 2.93
TNFRSF4-203ENST00000497869 NINLQ9Y2I6 1382 aa33.36■■■□□ 2.93
TNFRSF4-203ENST00000497869 FMN2Q9NZ56 1722 aa33.36■■■□□ 2.93
TNFRSF4-203ENST00000497869 A0A1W2PP64 1363 aa33.36■■■□□ 2.93
TNFRSF4-203ENST00000497869 XIRP1Q702N8 1843 aaKnown RBP33.35■■■□□ 2.93
TNFRSF4-203ENST00000497869 ANKRD36BQ8N2N9 1353 aa33.35■■■□□ 2.93
TNFRSF4-203ENST00000497869 TOPAZ1Q8N9V7 1692 aa33.32■■■□□ 2.93
TNFRSF4-203ENST00000497869 ANKARQ7Z5J8 1434 aa33.32■■■□□ 2.92
TNFRSF4-203ENST00000497869 LTBP4Q8N2S1 1624 aa33.31■■■□□ 2.92
TNFRSF4-203ENST00000497869 CPSF1Q10570 1443 aaKnown RBP33.29■■■□□ 2.92
TNFRSF4-203ENST00000497869 PLEKHG3A1L390 1219 aa33.29■■■□□ 2.92
TNFRSF4-203ENST00000497869 CNGB1Q14028 1251 aaPredicted RBP33.29■■■□□ 2.92
TNFRSF4-203ENST00000497869 AMER1Q5JTC6 1135 aaPredicted RBP33.29■■■□□ 2.92
TNFRSF4-203ENST00000497869 NSD3Q9BZ95 1437 aa33.28■■■□□ 2.92
TNFRSF4-203ENST00000497869 RGPD8O14715 1765 aaPredicted RBP33.27■■■□□ 2.92
TNFRSF4-203ENST00000497869 PMFBP1Q8TBY8 1022 aa33.26■■■□□ 2.92
TNFRSF4-203ENST00000497869 TERF2IPQ9NYB0 399 aa33.25■■■□□ 2.91
TNFRSF4-203ENST00000497869 PRKRIP1Q9H875 184 aaPredicted RBP33.25■■■□□ 2.91
TNFRSF4-203ENST00000497869 KNSTRNQ9Y448 316 aa33.25■■■□□ 2.91
TNFRSF4-203ENST00000497869 DCCP43146 1447 aa33.24■■■□□ 2.91
TNFRSF4-203ENST00000497869 ANP32CO43423 234 aa33.24■■■□□ 2.91
TNFRSF4-203ENST00000497869 ACEP12821 1306 aa33.24■■■□□ 2.91
TNFRSF4-203ENST00000497869 MSH6P52701 1360 aa33.23■■■□□ 2.91
TNFRSF4-203ENST00000497869 MST1RQ04912 1400 aa33.23■■■□□ 2.91
TNFRSF4-203ENST00000497869 ORAI2Q96SN7 254 aa33.22■■■□□ 2.91
TNFRSF4-203ENST00000497869 C1orf167Q5SNV9 1468 aa33.21■■■□□ 2.91
TNFRSF4-203ENST00000497869 CC2D1BQ5T0F9 858 aaKnown RBP33.21■■■□□ 2.91
TNFRSF4-203ENST00000497869 HDGFL2Q7Z4V5 671 aaPredicted RBP33.21■■■□□ 2.91
TNFRSF4-203ENST00000497869 ATF3P18847 181 aa33.2■■■□□ 2.91
TNFRSF4-203ENST00000497869 POLR3AO14802 1390 aaPredicted RBP33.19■■■□□ 2.9
TNFRSF4-203ENST00000497869 KTN1Q86UP2 1357 aaKnown RBP33.18■■■□□ 2.9
TNFRSF4-203ENST00000497869 ESCO1Q5FWF5 840 aa33.17■■■□□ 2.9
TNFRSF4-203ENST00000497869 CADPS2Q86UW7 1296 aa33.17■■■□□ 2.9
TNFRSF4-203ENST00000497869 PHF8Q9UPP1 1060 aa33.16■■■□□ 2.9
TNFRSF4-203ENST00000497869 ITSN1Q15811 1721 aa33.15■■■□□ 2.9
TNFRSF4-203ENST00000497869 NPC1L1Q9UHC9 1359 aa33.14■■■□□ 2.9
TNFRSF4-203ENST00000497869 PARD3Q8TEW0 1356 aa33.14■■■□□ 2.9
TNFRSF4-203ENST00000497869 AKAP12Q02952 1782 aa33.13■■■□□ 2.89
TNFRSF4-203ENST00000497869 NGDNQ8NEJ9 315 aaKnown RBP33.12■■■□□ 2.89
TNFRSF4-203ENST00000497869 ZNF692Q9BU19 519 aaPredicted RBP33.12■■■□□ 2.89
TNFRSF4-203ENST00000497869 USP6P35125 1406 aa33.12■■■□□ 2.89
TNFRSF4-203ENST00000497869 SSH2Q76I76 1423 aa33.12■■■□□ 2.89
TNFRSF4-203ENST00000497869 MON2Q7Z3U7 1717 aa33.11■■■□□ 2.89
TNFRSF4-203ENST00000497869 EDC4Q6P2E9 1401 aaKnown RBP33.11■■■□□ 2.89
TNFRSF4-203ENST00000497869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.11■■■□□ 2.89
TNFRSF4-203ENST00000497869 FYB1O15117 783 aa33.1■■■□□ 2.89
TNFRSF4-203ENST00000497869 CGNL1Q0VF96 1302 aa33.09■■■□□ 2.89
TNFRSF4-203ENST00000497869 NRKQ7Z2Y5 1582 aa33.06■■■□□ 2.88
TNFRSF4-203ENST00000497869 CCDC184Q52MB2 194 aa33.06■■■□□ 2.88
TNFRSF4-203ENST00000497869 GGNBP2Q9H3C7 697 aa33.06■■■□□ 2.88
TNFRSF4-203ENST00000497869 TTC21BQ7Z4L5 1316 aa33.06■■■□□ 2.88
TNFRSF4-203ENST00000497869 NME9Q86XW9 330 aa33.05■■■□□ 2.88
TNFRSF4-203ENST00000497869 SLAIN2Q9P270 581 aa33.05■■■□□ 2.88
TNFRSF4-203ENST00000497869 ZRANB1Q9UGI0 708 aa33.05■■■□□ 2.88
TNFRSF4-203ENST00000497869 RALBP1Q15311 655 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms