RNA–Protein interactions for RNA: ENST00000497802.1

PLXNA3-209, Transcript of plexin A3, humanhuman

TSL 2

Gene PLXNA3, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-209ENST00000497802 YTHDC2Q9H6S0 1430 aaKnown RBP21.53■■□□□ 1.04
PLXNA3-209ENST00000497802 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.04
PLXNA3-209ENST00000497802 TECPR2O15040 1411 aa21.52■■□□□ 1.04
PLXNA3-209ENST00000497802 ABCC11Q96J66 1382 aa21.51■■□□□ 1.03
PLXNA3-209ENST00000497802 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
PLXNA3-209ENST00000497802 PNPLA6Q8IY17 1366 aa21.5■■□□□ 1.03
PLXNA3-209ENST00000497802 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
PLXNA3-209ENST00000497802 MYOM2P54296 1465 aa21.5■■□□□ 1.03
PLXNA3-209ENST00000497802 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
PLXNA3-209ENST00000497802 CDC42BPGQ6DT37 1551 aa21.49■■□□□ 1.03
PLXNA3-209ENST00000497802 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
PLXNA3-209ENST00000497802 ESCO1Q5FWF5 840 aa21.49■■□□□ 1.03
PLXNA3-209ENST00000497802 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
PLXNA3-209ENST00000497802 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
PLXNA3-209ENST00000497802 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
PLXNA3-209ENST00000497802 SOS2Q07890 1332 aaPredicted RBP21.46■■□□□ 1.03
PLXNA3-209ENST00000497802 LAMC1P11047 1609 aa21.44■■□□□ 1.02
PLXNA3-209ENST00000497802 FOXO3O43524 673 aa21.44■■□□□ 1.02
PLXNA3-209ENST00000497802 ADAMTS2O95450 1211 aa21.44■■□□□ 1.02
PLXNA3-209ENST00000497802 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
PLXNA3-209ENST00000497802 DHX57Q6P158 1386 aaKnown RBP21.44■■□□□ 1.02
PLXNA3-209ENST00000497802 HRCP23327 699 aa21.43■■□□□ 1.02
PLXNA3-209ENST00000497802 AFF2P51816 1311 aa21.43■■□□□ 1.02
PLXNA3-209ENST00000497802 C8orf37Q96NL8 207 aa21.42■■□□□ 1.02
PLXNA3-209ENST00000497802 ADGRB1O14514 1584 aa21.41■■□□□ 1.02
PLXNA3-209ENST00000497802 ZNF772Q68DY9 489 aaPredicted RBP21.4■■□□□ 1.02
PLXNA3-209ENST00000497802 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
PLXNA3-209ENST00000497802 FMN2Q9NZ56 1722 aa21.4■■□□□ 1.02
PLXNA3-209ENST00000497802 PXDNQ92626 1479 aa21.39■■□□□ 1.02
PLXNA3-209ENST00000497802 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
PLXNA3-209ENST00000497802 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
PLXNA3-209ENST00000497802 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
PLXNA3-209ENST00000497802 POGKQ9P215 609 aa21.36■■□□□ 1.01
PLXNA3-209ENST00000497802 RGPD8O14715 1765 aaPredicted RBP21.35■■□□□ 1.01
PLXNA3-209ENST00000497802 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
PLXNA3-209ENST00000497802 NGLY1Q96IV0 654 aa21.34■■□□□ 1.01
PLXNA3-209ENST00000497802 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
PLXNA3-209ENST00000497802 RXRBP28702 533 aa21.33■■□□□ 1.01
PLXNA3-209ENST00000497802 DLC1Q96QB1 1528 aa21.33■■□□□ 1
PLXNA3-209ENST00000497802 USP32Q8NFA0 1604 aa21.3■■□□□ 1
PLXNA3-209ENST00000497802 COL22A1Q8NFW1 1626 aaPredicted RBP21.3■■□□□ 1
PLXNA3-209ENST00000497802 KRT28Q7Z3Y7 464 aa21.3■■□□□ 1
PLXNA3-209ENST00000497802 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
PLXNA3-209ENST00000497802 QTRT2Q9H974 415 aaKnown RBP21.3■■□□□ 1
PLXNA3-209ENST00000497802 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
PLXNA3-209ENST00000497802 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
PLXNA3-209ENST00000497802 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
PLXNA3-209ENST00000497802 KIF1AQ12756 1690 aa21.27■■□□□ 1
PLXNA3-209ENST00000497802 CABLES1Q8TDN4 633 aa21.26■□□□□ 0.99
PLXNA3-209ENST00000497802 USP21Q9UK80 565 aa21.26■□□□□ 0.99
PLXNA3-209ENST00000497802 RGS12O14924 1447 aa21.25■□□□□ 0.99
PLXNA3-209ENST00000497802 ADGRB2O60241 1585 aa21.25■□□□□ 0.99
PLXNA3-209ENST00000497802 NBPF1Q3BBV0 1214 aa21.25■□□□□ 0.99
PLXNA3-209ENST00000497802 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
PLXNA3-209ENST00000497802 ARHGEF28Q8N1W1 1705 aaKnown RBP21.22■□□□□ 0.99
PLXNA3-209ENST00000497802 RBM6P78332 1123 aaKnown RBP21.22■□□□□ 0.99
PLXNA3-209ENST00000497802 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
PLXNA3-209ENST00000497802 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
PLXNA3-209ENST00000497802 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
PLXNA3-209ENST00000497802 PSME1Q06323 249 aa21.21■□□□□ 0.99
PLXNA3-209ENST00000497802 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
PLXNA3-209ENST00000497802 UPF1Q92900 1129 aaKnown RBP eCLIP21.2■□□□□ 0.98
PLXNA3-209ENST00000497802 STAC3Q96MF2 364 aa21.2■□□□□ 0.98
PLXNA3-209ENST00000497802 TNS3Q68CZ2 1445 aa21.2■□□□□ 0.98
PLXNA3-209ENST00000497802 BCL9LQ86UU0 1499 aa21.19■□□□□ 0.98
PLXNA3-209ENST00000497802 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
PLXNA3-209ENST00000497802 L3MBTL2Q969R5 705 aa21.18■□□□□ 0.98
PLXNA3-209ENST00000497802 ATRNO75882 1429 aa21.18■□□□□ 0.98
PLXNA3-209ENST00000497802 CDK12Q9NYV4 1490 aaPredicted RBP21.18■□□□□ 0.98
PLXNA3-209ENST00000497802 TULP4Q9NRJ4 1543 aa21.18■□□□□ 0.98
PLXNA3-209ENST00000497802 TRPC5Q9UL62 973 aaPredicted RBP21.17■□□□□ 0.98
PLXNA3-209ENST00000497802 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
PLXNA3-209ENST00000497802 SBNO1A3KN83 1393 aa21.15■□□□□ 0.98
PLXNA3-209ENST00000497802 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
PLXNA3-209ENST00000497802 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
PLXNA3-209ENST00000497802 TRPM3Q9HCF6 1732 aaPredicted RBP21.13■□□□□ 0.97
PLXNA3-209ENST00000497802 NUDT16Q96DE0 195 aaKnown RBP21.13■□□□□ 0.97
PLXNA3-209ENST00000497802 ATP7BP35670 1465 aa21.13■□□□□ 0.97
PLXNA3-209ENST00000497802 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
PLXNA3-209ENST00000497802 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
PLXNA3-209ENST00000497802 SLIT2O94813 1529 aa21.11■□□□□ 0.97
PLXNA3-209ENST00000497802 NGDNQ8NEJ9 315 aaKnown RBP21.11■□□□□ 0.97
PLXNA3-209ENST00000497802 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
PLXNA3-209ENST00000497802 PAK3O75914 559 aaPredicted RBP21.09■□□□□ 0.97
PLXNA3-209ENST00000497802 UNC5CLQ8IV45 518 aa21.09■□□□□ 0.97
PLXNA3-209ENST00000497802 ARHGEF10O15013 1369 aa21.09■□□□□ 0.97
PLXNA3-209ENST00000497802 GPRASP1Q5JY77 1395 aa21.09■□□□□ 0.97
PLXNA3-209ENST00000497802 FAM83GA6ND36 823 aa21.08■□□□□ 0.97
PLXNA3-209ENST00000497802 GJD4Q96KN9 370 aaPredicted RBP21.08■□□□□ 0.97
PLXNA3-209ENST00000497802 NUTM2GQ5VZR2 741 aa21.07■□□□□ 0.96
PLXNA3-209ENST00000497802 ALS2Q96Q42 1657 aa21.07■□□□□ 0.96
PLXNA3-209ENST00000497802 GLI3P10071 1580 aa21.06■□□□□ 0.96
PLXNA3-209ENST00000497802 CABP2Q9NPB3 220 aa21.06■□□□□ 0.96
PLXNA3-209ENST00000497802 RALGAPBQ86X10 1494 aa21.06■□□□□ 0.96
PLXNA3-209ENST00000497802 PLCH1Q4KWH8 1693 aa21.05■□□□□ 0.96
PLXNA3-209ENST00000497802 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
PLXNA3-209ENST00000497802 NBPF8Q3BBV2 869 aa21.04■□□□□ 0.96
PLXNA3-209ENST00000497802 ACEP12821 1306 aa21.04■□□□□ 0.96
PLXNA3-209ENST00000497802 TOPAZ1Q8N9V7 1692 aa21.02■□□□□ 0.96
PLXNA3-209ENST00000497802 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms