RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 FUT2Q10981 343 aa8.2□□□□□ -1.1
PSPC1-205ENST00000497722 PUS10Q3MIT2 529 aaKnown RBP8.2□□□□□ -1.1
PSPC1-205ENST00000497722 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
PSPC1-205ENST00000497722 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
PSPC1-205ENST00000497722 SLC6A16Q9GZN6 736 aa8.19□□□□□ -1.1
PSPC1-205ENST00000497722 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
PSPC1-205ENST00000497722 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
PSPC1-205ENST00000497722 MDM2Q00987 491 aaPredicted RBP8.18□□□□□ -1.1
PSPC1-205ENST00000497722 PLA2G2CQ5R387 149 aa8.18□□□□□ -1.1
PSPC1-205ENST00000497722 CYP4X1Q8N118 509 aa8.17□□□□□ -1.1
PSPC1-205ENST00000497722 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
PSPC1-205ENST00000497722 TOR4AQ9NXH8 423 aa8.17□□□□□ -1.1
PSPC1-205ENST00000497722 FAM217BQ9NTX9 383 aaPredicted RBP8.16□□□□□ -1.1
PSPC1-205ENST00000497722 SLC27A5Q9Y2P5 690 aa8.16□□□□□ -1.1
PSPC1-205ENST00000497722 SALL2Q9Y467 1007 aaPredicted RBP8.16□□□□□ -1.1
PSPC1-205ENST00000497722 TERTO14746 1132 aaKnown RBP8.15□□□□□ -1.1
PSPC1-205ENST00000497722 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
PSPC1-205ENST00000497722 RPIAP49247 311 aa8.14□□□□□ -1.11
PSPC1-205ENST00000497722 BRICD5Q6PL45 260 aa8.14□□□□□ -1.11
PSPC1-205ENST00000497722 SPSB2Q99619 263 aa8.14□□□□□ -1.11
PSPC1-205ENST00000497722 CLCN1P35523 988 aa8.13□□□□□ -1.11
PSPC1-205ENST00000497722 AMHR2Q16671 573 aa8.13□□□□□ -1.11
PSPC1-205ENST00000497722 FAM160A2Q8N612 972 aaPredicted RBP8.13□□□□□ -1.11
PSPC1-205ENST00000497722 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
PSPC1-205ENST00000497722 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
PSPC1-205ENST00000497722 KDM4AO75164 1064 aa8.11□□□□□ -1.11
PSPC1-205ENST00000497722 CD2BP2O95400 341 aaKnown RBP8.11□□□□□ -1.11
PSPC1-205ENST00000497722 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
PSPC1-205ENST00000497722 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
PSPC1-205ENST00000497722 SLC24A1O60721 1099 aa8.09□□□□□ -1.11
PSPC1-205ENST00000497722 FMNL1O95466 1100 aaPredicted RBP8.09□□□□□ -1.11
PSPC1-205ENST00000497722 USP46P62068 366 aa8.09□□□□□ -1.11
PSPC1-205ENST00000497722 HLA-CQ95604 372 aa8.09□□□□□ -1.11
PSPC1-205ENST00000497722 TRIM47Q96LD4 638 aa8.09□□□□□ -1.11
PSPC1-205ENST00000497722 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
PSPC1-205ENST00000497722 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
PSPC1-205ENST00000497722 HOXA2O43364 376 aa8.08□□□□□ -1.12
PSPC1-205ENST00000497722 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
PSPC1-205ENST00000497722 GRIPAP1Q4V328 841 aa8.08□□□□□ -1.12
PSPC1-205ENST00000497722 MSS51Q4VC12 460 aa8.08□□□□□ -1.12
PSPC1-205ENST00000497722 TRIM66O15016 1216 aa8.07□□□□□ -1.12
PSPC1-205ENST00000497722 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
PSPC1-205ENST00000497722 SLC16A10Q8TF71 515 aa8.06□□□□□ -1.12
PSPC1-205ENST00000497722 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
PSPC1-205ENST00000497722 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
PSPC1-205ENST00000497722 Q3C1V9 767 aa8.05□□□□□ -1.12
PSPC1-205ENST00000497722 GIGYF2Q6Y7W6 1299 aaKnown RBP8.05□□□□□ -1.12
PSPC1-205ENST00000497722 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
PSPC1-205ENST00000497722 FCF1Q9Y324 198 aaKnown RBP8.05□□□□□ -1.12
PSPC1-205ENST00000497722 MMP16P51512 607 aa8.04□□□□□ -1.12
PSPC1-205ENST00000497722 PARP9Q8IXQ6 854 aa8.04□□□□□ -1.12
PSPC1-205ENST00000497722 AK7Q96M32 723 aa8.04□□□□□ -1.12
PSPC1-205ENST00000497722 GUCA2AQ02747 115 aa8.03□□□□□ -1.12
PSPC1-205ENST00000497722 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
PSPC1-205ENST00000497722 SPIRE2Q8WWL2 714 aa8.02□□□□□ -1.13
PSPC1-205ENST00000497722 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
PSPC1-205ENST00000497722 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
PSPC1-205ENST00000497722 TTLL12Q14166 644 aaPredicted RBP8.01□□□□□ -1.13
PSPC1-205ENST00000497722 SUZ12Q15022 739 aaKnown RBP8.01□□□□□ -1.13
PSPC1-205ENST00000497722 MS4A1P11836 297 aa8□□□□□ -1.13
PSPC1-205ENST00000497722 SMPD1P17405 629 aa8□□□□□ -1.13
PSPC1-205ENST00000497722 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
PSPC1-205ENST00000497722 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
PSPC1-205ENST00000497722 WNT7AO00755 349 aa7.99□□□□□ -1.13
PSPC1-205ENST00000497722 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
PSPC1-205ENST00000497722 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
PSPC1-205ENST00000497722 IRF7Q92985 503 aa7.99□□□□□ -1.13
PSPC1-205ENST00000497722 SLC24A3Q9HC58 644 aa7.99□□□□□ -1.13
PSPC1-205ENST00000497722 BEGAINQ9BUH8 593 aa7.98□□□□□ -1.13
PSPC1-205ENST00000497722 NXF1Q9UBU9 619 aaKnown RBP7.98□□□□□ -1.13
PSPC1-205ENST00000497722 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 FDX1P10109 184 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 NDUFV2P19404 249 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 GMPRP36959 345 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 PDE4DQ08499 809 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 NPAS3Q8IXF0 933 aa7.97□□□□□ -1.13
PSPC1-205ENST00000497722 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
PSPC1-205ENST00000497722 GJA5P36382 358 aa7.96□□□□□ -1.14
PSPC1-205ENST00000497722 RETREG3Q86VR2 466 aa7.96□□□□□ -1.14
PSPC1-205ENST00000497722 BCANQ96GW7 911 aa7.95□□□□□ -1.14
PSPC1-205ENST00000497722 TBC1D2Q9BYX2 928 aa7.95□□□□□ -1.14
PSPC1-205ENST00000497722 JUNDP17535 347 aa7.94□□□□□ -1.14
PSPC1-205ENST00000497722 RSBN1LQ6PCB5 846 aaPredicted RBP7.93□□□□□ -1.14
PSPC1-205ENST00000497722 J3QL48 77 aa7.92□□□□□ -1.14
PSPC1-205ENST00000497722 SPTLC1O15269 473 aa7.92□□□□□ -1.14
PSPC1-205ENST00000497722 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
PSPC1-205ENST00000497722 TRIM32Q13049 653 aa7.91□□□□□ -1.14
PSPC1-205ENST00000497722 DIXDC1Q155Q3 683 aa7.91□□□□□ -1.14
PSPC1-205ENST00000497722 HPS1Q92902 700 aa7.91□□□□□ -1.14
PSPC1-205ENST00000497722 PCDHB15Q9Y5E8 787 aa7.91□□□□□ -1.14
PSPC1-205ENST00000497722 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
PSPC1-205ENST00000497722 H3BM21 787 aa7.89□□□□□ -1.15
PSPC1-205ENST00000497722 DESI1Q6ICB0 168 aa7.89□□□□□ -1.15
PSPC1-205ENST00000497722 PTCRAQ6ISU1 281 aaPredicted RBP7.89□□□□□ -1.15
PSPC1-205ENST00000497722 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
PSPC1-205ENST00000497722 SKOR1P84550 965 aa7.88□□□□□ -1.15
PSPC1-205ENST00000497722 MTMR2Q13614 643 aa7.88□□□□□ -1.15
PSPC1-205ENST00000497722 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
PSPC1-205ENST00000497722 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
PSPC1-205ENST00000497722 RIC3Q7Z5B4 369 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms