RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 NGLY1Q96IV0 654 aa26.78■■□□□ 1.88
ELL3-208ENST00000497700 CCDC144AA2RUR9 1427 aa26.77■■□□□ 1.88
ELL3-208ENST00000497700 STK26Q9P289 416 aa26.77■■□□□ 1.88
ELL3-208ENST00000497700 SPATA31E1Q6ZUB1 1445 aa26.76■■□□□ 1.87
ELL3-208ENST00000497700 NUTM2FA1L443 756 aa26.75■■□□□ 1.87
ELL3-208ENST00000497700 RBM6P78332 1123 aaKnown RBP26.75■■□□□ 1.87
ELL3-208ENST00000497700 TRIM26Q12899 539 aaPredicted RBP26.75■■□□□ 1.87
ELL3-208ENST00000497700 COL22A1Q8NFW1 1626 aaPredicted RBP26.75■■□□□ 1.87
ELL3-208ENST00000497700 XPCQ01831 940 aaPredicted RBP26.74■■□□□ 1.87
ELL3-208ENST00000497700 ESCO1Q5FWF5 840 aa26.74■■□□□ 1.87
ELL3-208ENST00000497700 WAPLQ7Z5K2 1190 aa26.74■■□□□ 1.87
ELL3-208ENST00000497700 PLEKHH1Q9ULM0 1364 aa26.72■■□□□ 1.87
ELL3-208ENST00000497700 TMEM132EQ6IEE7 984 aa26.72■■□□□ 1.87
ELL3-208ENST00000497700 KNDC1Q76NI1 1749 aa26.71■■□□□ 1.87
ELL3-208ENST00000497700 PXDNQ92626 1479 aa26.71■■□□□ 1.87
ELL3-208ENST00000497700 MPHOSPH9Q99550 1183 aa26.71■■□□□ 1.87
ELL3-208ENST00000497700 USP21Q9UK80 565 aa26.7■■□□□ 1.86
ELL3-208ENST00000497700 TECPR2O15040 1411 aa26.69■■□□□ 1.86
ELL3-208ENST00000497700 MYOM2P54296 1465 aa26.68■■□□□ 1.86
ELL3-208ENST00000497700 MARF1Q9Y4F3 1742 aaKnown RBP26.68■■□□□ 1.86
ELL3-208ENST00000497700 FOXO3O43524 673 aa26.68■■□□□ 1.86
ELL3-208ENST00000497700 LRPPRCP42704 1394 aaKnown RBP26.68■■□□□ 1.86
ELL3-208ENST00000497700 NPHP3Q7Z494 1330 aa26.67■■□□□ 1.86
ELL3-208ENST00000497700 PIK3C2GO75747 1445 aa26.67■■□□□ 1.86
ELL3-208ENST00000497700 FMN2Q9NZ56 1722 aa26.67■■□□□ 1.86
ELL3-208ENST00000497700 ANKRD30BQ9BXX2 1392 aa26.66■■□□□ 1.86
ELL3-208ENST00000497700 RGPD8O14715 1765 aaPredicted RBP26.63■■□□□ 1.85
ELL3-208ENST00000497700 FNBP4Q8N3X1 1017 aaPredicted RBP26.63■■□□□ 1.85
ELL3-208ENST00000497700 ATRNO75882 1429 aa26.63■■□□□ 1.85
ELL3-208ENST00000497700 ABCC11Q96J66 1382 aa26.62■■□□□ 1.85
ELL3-208ENST00000497700 TRPC5Q9UL62 973 aaPredicted RBP26.62■■□□□ 1.85
ELL3-208ENST00000497700 YTHDC2Q9H6S0 1430 aaKnown RBP26.62■■□□□ 1.85
ELL3-208ENST00000497700 BCL9LQ86UU0 1499 aa26.58■■□□□ 1.85
ELL3-208ENST00000497700 PCGF6Q9BYE7 350 aa26.58■■□□□ 1.85
ELL3-208ENST00000497700 KIF1AQ12756 1690 aa26.57■■□□□ 1.84
ELL3-208ENST00000497700 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
ELL3-208ENST00000497700 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
ELL3-208ENST00000497700 NRXN1Q9ULB1 1477 aa26.53■■□□□ 1.84
ELL3-208ENST00000497700 PLEKHG5O94827 1062 aa26.52■■□□□ 1.84
ELL3-208ENST00000497700 SAFB2Q14151 953 aaKnown RBP eCLIP26.52■■□□□ 1.84
ELL3-208ENST00000497700 SPATA31A3Q5VYP0 1347 aa26.52■■□□□ 1.84
ELL3-208ENST00000497700 C14orf93Q9H972 538 aaKnown RBP26.52■■□□□ 1.84
ELL3-208ENST00000497700 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.51■■□□□ 1.83
ELL3-208ENST00000497700 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
ELL3-208ENST00000497700 KRT28Q7Z3Y7 464 aa26.49■■□□□ 1.83
ELL3-208ENST00000497700 EP400Q96L91 3159 aa26.49■■□□□ 1.83
ELL3-208ENST00000497700 GLI3P10071 1580 aa26.49■■□□□ 1.83
ELL3-208ENST00000497700 GJD4Q96KN9 370 aaPredicted RBP26.47■■□□□ 1.83
ELL3-208ENST00000497700 CABLES1Q8TDN4 633 aa26.46■■□□□ 1.83
ELL3-208ENST00000497700 PRAM1Q96QH2 718 aa26.46■■□□□ 1.83
ELL3-208ENST00000497700 DHX57Q6P158 1386 aaKnown RBP26.46■■□□□ 1.83
ELL3-208ENST00000497700 ABCA3Q99758 1704 aa26.45■■□□□ 1.83
ELL3-208ENST00000497700 SLIT2O94813 1529 aa26.45■■□□□ 1.83
ELL3-208ENST00000497700 PHF8Q9UPP1 1060 aa26.45■■□□□ 1.82
ELL3-208ENST00000497700 RAB3GAP2Q9H2M9 1393 aa26.45■■□□□ 1.82
ELL3-208ENST00000497700 SIRT1Q96EB6 747 aa26.44■■□□□ 1.82
ELL3-208ENST00000497700 TNS3Q68CZ2 1445 aa26.44■■□□□ 1.82
ELL3-208ENST00000497700 BRWD3Q6RI45 1802 aa26.44■■□□□ 1.82
ELL3-208ENST00000497700 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
ELL3-208ENST00000497700 PLCH1Q4KWH8 1693 aa26.43■■□□□ 1.82
ELL3-208ENST00000497700 UNC5CLQ8IV45 518 aa26.42■■□□□ 1.82
ELL3-208ENST00000497700 ADGRB1O14514 1584 aa26.4■■□□□ 1.82
ELL3-208ENST00000497700 DLC1Q96QB1 1528 aa26.39■■□□□ 1.82
ELL3-208ENST00000497700 HAP1P54257 671 aaPredicted RBP26.39■■□□□ 1.82
ELL3-208ENST00000497700 LMOD2Q6P5Q4 547 aa26.39■■□□□ 1.82
ELL3-208ENST00000497700 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
ELL3-208ENST00000497700 POGKQ9P215 609 aa26.38■■□□□ 1.81
ELL3-208ENST00000497700 HIRIP3Q9BW71 556 aaPredicted RBP26.37■■□□□ 1.81
ELL3-208ENST00000497700 ADGRB2O60241 1585 aa26.37■■□□□ 1.81
ELL3-208ENST00000497700 PSME1Q06323 249 aa26.35■■□□□ 1.81
ELL3-208ENST00000497700 TRPM3Q9HCF6 1732 aaPredicted RBP26.35■■□□□ 1.81
ELL3-208ENST00000497700 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
ELL3-208ENST00000497700 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
ELL3-208ENST00000497700 NWD2Q9ULI1 1742 aa26.34■■□□□ 1.81
ELL3-208ENST00000497700 KDM2AQ9Y2K7 1162 aa26.34■■□□□ 1.81
ELL3-208ENST00000497700 SRCAPQ6ZRS2 3230 aa26.33■■□□□ 1.81
ELL3-208ENST00000497700 MINK1Q8N4C8 1332 aaPredicted RBP26.33■■□□□ 1.81
ELL3-208ENST00000497700 ANKARQ7Z5J8 1434 aa26.32■■□□□ 1.8
ELL3-208ENST00000497700 PRR36Q9H6K5 1346 aa26.31■■□□□ 1.8
ELL3-208ENST00000497700 ACIN1Q9UKV3 1341 aaKnown RBP26.31■■□□□ 1.8
ELL3-208ENST00000497700 CCDC9Q9Y3X0 531 aaKnown RBP26.3■■□□□ 1.8
ELL3-208ENST00000497700 ALS2Q96Q42 1657 aa26.29■■□□□ 1.8
ELL3-208ENST00000497700 SEPT12Q8IYM1 358 aa26.29■■□□□ 1.8
ELL3-208ENST00000497700 ZRANB1Q9UGI0 708 aa26.29■■□□□ 1.8
ELL3-208ENST00000497700 ARHGEF10O15013 1369 aa26.29■■□□□ 1.8
ELL3-208ENST00000497700 NRAPQ86VF7 1730 aa26.28■■□□□ 1.8
ELL3-208ENST00000497700 VPS72Q15906 364 aa26.28■■□□□ 1.8
ELL3-208ENST00000497700 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
ELL3-208ENST00000497700 FAM83GA6ND36 823 aa26.27■■□□□ 1.8
ELL3-208ENST00000497700 TULP4Q9NRJ4 1543 aa26.26■■□□□ 1.79
ELL3-208ENST00000497700 CCDC125Q86Z20 511 aa26.26■■□□□ 1.79
ELL3-208ENST00000497700 ARHGEF28Q8N1W1 1705 aaKnown RBP26.25■■□□□ 1.79
ELL3-208ENST00000497700 BLMP54132 1417 aaPredicted RBP26.25■■□□□ 1.79
ELL3-208ENST00000497700 DEFB132Q7Z7B7 95 aa26.25■■□□□ 1.79
ELL3-208ENST00000497700 CRYBG1Q9Y4K1 1723 aa26.24■■□□□ 1.79
ELL3-208ENST00000497700 WASLO00401 505 aaPredicted RBP26.21■■□□□ 1.79
ELL3-208ENST00000497700 GPRASP1Q5JY77 1395 aa26.2■■□□□ 1.79
ELL3-208ENST00000497700 COL14A1Q05707 1796 aaKnown RBP26.2■■□□□ 1.78
ELL3-208ENST00000497700 A0A0G2JS52 829 aa26.19■■□□□ 1.78
ELL3-208ENST00000497700 MYT1Q01538 1121 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms