RNA–Protein interactions for RNA: ENST00000497697.5

SMTN-220, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-220ENST00000497697 SPATA31A6Q5VVP1 1343 aa30.68■■■□□ 2.5
SMTN-220ENST00000497697 SHPRHQ149N8 1683 aa30.68■■■□□ 2.5
SMTN-220ENST00000497697 LRP6O75581 1613 aa30.67■■■□□ 2.5
SMTN-220ENST00000497697 LAMC1P11047 1609 aa30.67■■■□□ 2.5
SMTN-220ENST00000497697 DCAF11Q8TEB1 546 aa30.67■■■□□ 2.5
SMTN-220ENST00000497697 CDC42BPGQ6DT37 1551 aa30.66■■■□□ 2.5
SMTN-220ENST00000497697 DHX57Q6P158 1386 aaKnown RBP30.66■■■□□ 2.5
SMTN-220ENST00000497697 SIRT1Q96EB6 747 aa30.63■■■□□ 2.49
SMTN-220ENST00000497697 POTEAQ6S8J7 498 aa30.62■■■□□ 2.49
SMTN-220ENST00000497697 LRRC59Q96AG4 307 aaKnown RBP30.62■■■□□ 2.49
SMTN-220ENST00000497697 ADGRB1O14514 1584 aa30.59■■■□□ 2.49
SMTN-220ENST00000497697 NUTM2FA1L443 756 aa30.59■■■□□ 2.49
SMTN-220ENST00000497697 ESCO1Q5FWF5 840 aa30.58■■■□□ 2.49
SMTN-220ENST00000497697 SOS2Q07890 1332 aaPredicted RBP30.57■■■□□ 2.48
SMTN-220ENST00000497697 NUTM2BA6NNL0 878 aaPredicted RBP30.57■■■□□ 2.48
SMTN-220ENST00000497697 NUTM2EB1AL46 878 aaPredicted RBP30.57■■■□□ 2.48
SMTN-220ENST00000497697 NUTM2AQ8IVF1 878 aaPredicted RBP30.57■■■□□ 2.48
SMTN-220ENST00000497697 PNPLA6Q8IY17 1366 aa30.56■■■□□ 2.48
SMTN-220ENST00000497697 MEX3CQ5U5Q3 659 aaKnown RBP30.56■■■□□ 2.48
SMTN-220ENST00000497697 STAC3Q96MF2 364 aa30.56■■■□□ 2.48
SMTN-220ENST00000497697 PRAM1Q96QH2 718 aa30.56■■■□□ 2.48
SMTN-220ENST00000497697 SAFB2Q14151 953 aaKnown RBP eCLIP30.54■■■□□ 2.48
SMTN-220ENST00000497697 DLC1Q96QB1 1528 aa30.53■■■□□ 2.48
SMTN-220ENST00000497697 FMN2Q9NZ56 1722 aa30.52■■■□□ 2.48
SMTN-220ENST00000497697 TRAK1Q9UPV9 953 aa30.51■■■□□ 2.47
SMTN-220ENST00000497697 FOXO3O43524 673 aa30.49■■■□□ 2.47
SMTN-220ENST00000497697 POGKQ9P215 609 aa30.49■■■□□ 2.47
SMTN-220ENST00000497697 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
SMTN-220ENST00000497697 XPCQ01831 940 aaPredicted RBP30.46■■■□□ 2.47
SMTN-220ENST00000497697 PXDNQ92626 1479 aa30.45■■■□□ 2.47
SMTN-220ENST00000497697 ZNF772Q68DY9 489 aaPredicted RBP30.41■■■□□ 2.46
SMTN-220ENST00000497697 RGPD8O14715 1765 aaPredicted RBP30.41■■■□□ 2.46
SMTN-220ENST00000497697 HIRIP3Q9BW71 556 aaPredicted RBP30.4■■■□□ 2.46
SMTN-220ENST00000497697 MINK1Q8N4C8 1332 aaPredicted RBP30.39■■■□□ 2.46
SMTN-220ENST00000497697 ADGRB2O60241 1585 aa30.38■■■□□ 2.45
SMTN-220ENST00000497697 C8orf37Q96NL8 207 aa30.38■■■□□ 2.45
SMTN-220ENST00000497697 AFF2P51816 1311 aa30.38■■■□□ 2.45
SMTN-220ENST00000497697 KIF1AQ12756 1690 aa30.37■■■□□ 2.45
SMTN-220ENST00000497697 ADAMTS2O95450 1211 aa30.37■■■□□ 2.45
SMTN-220ENST00000497697 SIN3AQ96ST3 1273 aa30.37■■■□□ 2.45
SMTN-220ENST00000497697 PHF8Q9UPP1 1060 aa30.36■■■□□ 2.45
SMTN-220ENST00000497697 COL22A1Q8NFW1 1626 aaPredicted RBP30.36■■■□□ 2.45
SMTN-220ENST00000497697 USP32Q8NFA0 1604 aa30.34■■■□□ 2.45
SMTN-220ENST00000497697 ARHGEF28Q8N1W1 1705 aaKnown RBP30.33■■■□□ 2.45
SMTN-220ENST00000497697 NBPF1Q3BBV0 1214 aa30.33■■■□□ 2.45
SMTN-220ENST00000497697 KRT28Q7Z3Y7 464 aa30.33■■■□□ 2.45
SMTN-220ENST00000497697 ANKARQ7Z5J8 1434 aa30.32■■■□□ 2.44
SMTN-220ENST00000497697 L3MBTL2Q969R5 705 aa30.32■■■□□ 2.44
SMTN-220ENST00000497697 KIAA1210Q9ULL0 1709 aa30.32■■■□□ 2.44
SMTN-220ENST00000497697 SPATA31A3Q5VYP0 1347 aa30.3■■■□□ 2.44
SMTN-220ENST00000497697 PRR36Q9H6K5 1346 aa30.29■■■□□ 2.44
SMTN-220ENST00000497697 WASLO00401 505 aaPredicted RBP30.29■■■□□ 2.44
SMTN-220ENST00000497697 PMFBP1Q8TBY8 1022 aa30.29■■■□□ 2.44
SMTN-220ENST00000497697 NGLY1Q96IV0 654 aa30.29■■■□□ 2.44
SMTN-220ENST00000497697 NEUROD1Q13562 356 aa30.28■■■□□ 2.44
SMTN-220ENST00000497697 RXRBP28702 533 aa30.25■■■□□ 2.43
SMTN-220ENST00000497697 TULP4Q9NRJ4 1543 aa30.25■■■□□ 2.43
SMTN-220ENST00000497697 PSME1Q06323 249 aa30.23■■■□□ 2.43
SMTN-220ENST00000497697 QTRT2Q9H974 415 aaKnown RBP30.23■■■□□ 2.43
SMTN-220ENST00000497697 EIF3AQ14152 1382 aaKnown RBP30.23■■■□□ 2.43
SMTN-220ENST00000497697 TRIM26Q12899 539 aaPredicted RBP30.22■■■□□ 2.43
SMTN-220ENST00000497697 TNS3Q68CZ2 1445 aa30.22■■■□□ 2.43
SMTN-220ENST00000497697 SBNO1A3KN83 1393 aa30.2■■■□□ 2.43
SMTN-220ENST00000497697 FNBP4Q8N3X1 1017 aaPredicted RBP30.2■■■□□ 2.43
SMTN-220ENST00000497697 USP21Q9UK80 565 aa30.18■■■□□ 2.42
SMTN-220ENST00000497697 CDK19Q9BWU1 502 aa30.17■■■□□ 2.42
SMTN-220ENST00000497697 ATP7BP35670 1465 aa30.16■■■□□ 2.42
SMTN-220ENST00000497697 MARF1Q9Y4F3 1742 aaKnown RBP30.16■■■□□ 2.42
SMTN-220ENST00000497697 NUDT16Q96DE0 195 aaKnown RBP30.15■■■□□ 2.42
SMTN-220ENST00000497697 CDK12Q9NYV4 1490 aaPredicted RBP30.14■■■□□ 2.42
SMTN-220ENST00000497697 RBM6P78332 1123 aaKnown RBP30.14■■■□□ 2.42
SMTN-220ENST00000497697 LMOD2Q6P5Q4 547 aa30.14■■■□□ 2.42
SMTN-220ENST00000497697 CABLES1Q8TDN4 633 aa30.14■■■□□ 2.42
SMTN-220ENST00000497697 PLEKHG5O94827 1062 aa30.13■■■□□ 2.41
SMTN-220ENST00000497697 TRPM3Q9HCF6 1732 aaPredicted RBP30.12■■■□□ 2.41
SMTN-220ENST00000497697 NGDNQ8NEJ9 315 aaKnown RBP30.11■■■□□ 2.41
SMTN-220ENST00000497697 CENPJQ9HC77 1338 aaPredicted RBP30.11■■■□□ 2.41
SMTN-220ENST00000497697 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
SMTN-220ENST00000497697 GPRASP1Q5JY77 1395 aa30.11■■■□□ 2.41
SMTN-220ENST00000497697 BCL9LQ86UU0 1499 aa30.11■■■□□ 2.41
SMTN-220ENST00000497697 TRPM1Q7Z4N2 1603 aa30.11■■■□□ 2.41
SMTN-220ENST00000497697 TRPC5Q9UL62 973 aaPredicted RBP30.1■■■□□ 2.41
SMTN-220ENST00000497697 RGS12O14924 1447 aa30.09■■■□□ 2.41
SMTN-220ENST00000497697 ATRNO75882 1429 aa30.09■■■□□ 2.41
SMTN-220ENST00000497697 ITSN1Q15811 1721 aa30.08■■■□□ 2.41
SMTN-220ENST00000497697 NBPF8Q3BBV2 869 aa30.07■■■□□ 2.4
SMTN-220ENST00000497697 HAP1P54257 671 aaPredicted RBP30.06■■■□□ 2.4
SMTN-220ENST00000497697 ALS2Q96Q42 1657 aa30.05■■■□□ 2.4
SMTN-220ENST00000497697 ABCA3Q99758 1704 aa30.05■■■□□ 2.4
SMTN-220ENST00000497697 CCDC61Q9Y6R9 512 aa30.04■■■□□ 2.4
SMTN-220ENST00000497697 SLIT2O94813 1529 aa30.04■■■□□ 2.4
SMTN-220ENST00000497697 TOPAZ1Q8N9V7 1692 aa30.04■■■□□ 2.4
SMTN-220ENST00000497697 ROCK2O75116 1388 aaKnown RBP30.03■■■□□ 2.4
SMTN-220ENST00000497697 QRICH2Q9H0J4 1663 aa30.03■■■□□ 2.4
SMTN-220ENST00000497697 PAK3O75914 559 aaPredicted RBP30.01■■■□□ 2.39
SMTN-220ENST00000497697 PLEKHG3A1L390 1219 aa30■■■□□ 2.39
SMTN-220ENST00000497697 SRPK2P78362 688 aaKnown RBP30■■■□□ 2.39
SMTN-220ENST00000497697 UNC5CLQ8IV45 518 aa30■■■□□ 2.39
SMTN-220ENST00000497697 UPF1Q92900 1129 aaKnown RBP eCLIP30■■■□□ 2.39
SMTN-220ENST00000497697 CABP2Q9NPB3 220 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms