RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	NEURL4	Q96JN8	1562 aa		8.97	□□□□□ -0.97
UBE3C-208	ENST00000497368	ERBB3	P21860	1342 aa		8.97	□□□□□ -0.97
UBE3C-208	ENST00000497368	CEP152	O94986	1710 aa		8.97	□□□□□ -0.97
UBE3C-208	ENST00000497368	POLR1A	O95602	1720 aa	Predicted RBP	8.97	□□□□□ -0.97
UBE3C-208	ENST00000497368	NCOA1	Q15788	1441 aa		8.97	□□□□□ -0.97
UBE3C-208	ENST00000497368	CAMSAP1	Q5T5Y3	1602 aa		8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	HNRNPM	P52272	730 aa	Known RBP eCLIP	8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	TSHZ2	Q9NRE2	1034 aa		8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	PTPRK	Q15262	1439 aa		8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	UHRF1BP1	Q6BDS2	1440 aa		8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	CNTLN	Q9NXG0	1405 aa		8.96	□□□□□ -0.98
UBE3C-208	ENST00000497368	EIF2AK4	Q9P2K8	1649 aa	Known RBP	8.95	□□□□□ -0.98
UBE3C-208	ENST00000497368	CDAN1	Q8IWY9	1227 aa		8.95	□□□□□ -0.98
UBE3C-208	ENST00000497368	RTEL1-TNFRSF6B	F6WH68	1400 aa		8.95	□□□□□ -0.98
UBE3C-208	ENST00000497368	NPAT	Q14207	1427 aa		8.95	□□□□□ -0.98
UBE3C-208	ENST00000497368	DNMT1	P26358	1616 aa	Known RBP	8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	ZC3H13	Q5T200	1668 aa	Known RBP	8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	VARS2	Q5ST30	1063 aa	Known RBP	8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	SPAG9	O60271	1321 aa	Known RBP	8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	KDM5D	Q9BY66	1539 aa		8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	FAM135A	Q9P2D6	1515 aa		8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	DEPDC5	O75140	1603 aa		8.94	□□□□□ -0.98
UBE3C-208	ENST00000497368	LOC105371045	A0A1W2PR82	267 aa		8.93	□□□□□ -0.98
UBE3C-208	ENST00000497368	OXER1	Q8TDS5	423 aa		8.93	□□□□□ -0.98
UBE3C-208	ENST00000497368	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.93	□□□□□ -0.98
UBE3C-208	ENST00000497368	TCOF1	Q13428	1488 aa	Known RBP	8.93	□□□□□ -0.98
UBE3C-208	ENST00000497368	PTPN23	Q9H3S7	1636 aa		8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	ABCC3	O15438	1527 aa		8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	PLCB2	Q00722	1185 aa		8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	EMILIN3	Q9NT22	766 aa		8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	CFDP1	Q9UEE9	299 aa	Predicted RBP	8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	LHX6	Q9UPM6	363 aa		8.92	□□□□□ -0.98
UBE3C-208	ENST00000497368	PTPRT	O14522	1441 aa		8.91	□□□□□ -0.98
UBE3C-208	ENST00000497368	ZNF316	A6NFI3	1004 aa	Predicted RBP	8.91	□□□□□ -0.98
UBE3C-208	ENST00000497368	TBC1D12	O60347	775 aa		8.91	□□□□□ -0.98
UBE3C-208	ENST00000497368	STRCP1	A6NGW2	1772 aa		8.91	□□□□□ -0.98
UBE3C-208	ENST00000497368	SPATA31D1	Q6ZQQ2	1576 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	PRDM15	P57071	1507 aa	Predicted RBP	8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	PZP	P20742	1482 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	PLA2R1	Q13018	1463 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	MYOM3	Q5VTT5	1437 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	ZMYM3	Q14202	1370 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	KANK4	Q5T7N3	995 aa	Predicted RBP	8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	FBXO41	Q8TF61	875 aa		8.9	□□□□□ -0.98
UBE3C-208	ENST00000497368	DHX29	Q7Z478	1369 aa	Known RBP	8.89	□□□□□ -0.99
UBE3C-208	ENST00000497368	PCDH10	Q9P2E7	1040 aa		8.89	□□□□□ -0.99
UBE3C-208	ENST00000497368	ALK	Q9UM73	1620 aa		8.89	□□□□□ -0.99
UBE3C-208	ENST00000497368	SHANK2	Q9UPX8	1470 aa		8.89	□□□□□ -0.99
UBE3C-208	ENST00000497368	UBR1	Q8IWV7	1749 aa		8.88	□□□□□ -0.99
UBE3C-208	ENST00000497368	A2ML1	A8K2U0	1454 aa		8.88	□□□□□ -0.99
UBE3C-208	ENST00000497368	VWDE	Q8N2E2	1590 aa		8.87	□□□□□ -0.99
UBE3C-208	ENST00000497368	CAMK2B	Q13554	666 aa		8.87	□□□□□ -0.99
UBE3C-208	ENST00000497368	MIA2	Q96PC5	1412 aa		8.87	□□□□□ -0.99
UBE3C-208	ENST00000497368	MAP3K9	P80192	1104 aa		8.86	□□□□□ -0.99
UBE3C-208	ENST00000497368	WDR70	Q9NW82	654 aa		8.86	□□□□□ -0.99
UBE3C-208	ENST00000497368	ABCC5	O15440	1437 aa		8.86	□□□□□ -0.99
UBE3C-208	ENST00000497368	XIRP1	Q702N8	1843 aa	Known RBP	8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	ERVK-7	P63135	1459 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	IQSEC2	Q5JU85	1478 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	KRTAP3-3	Q9BYR6	98 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	KRTAP3-2	Q9BYR7	98 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	MYT1L	Q9UL68	1186 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	DUOX2	Q9NRD8	1548 aa		8.85	□□□□□ -0.99
UBE3C-208	ENST00000497368	CFAP65	Q6ZU64	1925 aa	Known RBP	8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	SYNM	O15061	1565 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	EVI5	O60447	810 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	FGD6	Q6ZV73	1430 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	ZNF687	Q8N1G0	1237 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	CERK	Q8TCT0	537 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	IQGAP1	P46940	1657 aa		8.84	□□□□□ -0.99
UBE3C-208	ENST00000497368	DAPK1	P53355	1430 aa		8.83	□□□□□ -1
UBE3C-208	ENST00000497368	DPYSL4	O14531	572 aa		8.83	□□□□□ -1
UBE3C-208	ENST00000497368	HAP1	P54257	671 aa	Predicted RBP	8.83	□□□□□ -1
UBE3C-208	ENST00000497368	PIK3C2B	O00750	1634 aa		8.83	□□□□□ -1
UBE3C-208	ENST00000497368	MYO5B	Q9ULV0	1848 aa		8.82	□□□□□ -1
UBE3C-208	ENST00000497368	E2F4	Q16254	413 aa		8.82	□□□□□ -1
UBE3C-208	ENST00000497368	TNR	Q92752	1358 aa		8.82	□□□□□ -1
UBE3C-208	ENST00000497368	ADGRL2	O95490	1459 aa		8.82	□□□□□ -1
UBE3C-208	ENST00000497368	LMTK2	Q8IWU2	1503 aa		8.81	□□□□□ -1
UBE3C-208	ENST00000497368	FBXO31	Q5XUX0	539 aa	Predicted RBP	8.81	□□□□□ -1
UBE3C-208	ENST00000497368	GGT6	Q6P531	493 aa		8.81	□□□□□ -1
UBE3C-208	ENST00000497368	MED14	O60244	1454 aa		8.81	□□□□□ -1
UBE3C-208	ENST00000497368	UNC13B	O14795	1591 aa		8.81	□□□□□ -1
UBE3C-208	ENST00000497368	UGGT1	Q9NYU2	1555 aa		8.81	□□□□□ -1
UBE3C-208	ENST00000497368	KDM5A	P29375	1690 aa	Known RBP	8.81	□□□□□ -1
UBE3C-208	ENST00000497368	ERBIN	Q96RT1	1412 aa		8.8	□□□□□ -1
UBE3C-208	ENST00000497368	EFCAB6	Q5THR3	1501 aa		8.8	□□□□□ -1
UBE3C-208	ENST00000497368	NLRP1	Q9C000	1473 aa		8.8	□□□□□ -1
UBE3C-208	ENST00000497368	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	8.8	□□□□□ -1
UBE3C-208	ENST00000497368	ARHGAP23	Q9P227	1491 aa		8.79	□□□□□ -1
UBE3C-208	ENST00000497368	KIF3B	O15066	747 aa		8.79	□□□□□ -1
UBE3C-208	ENST00000497368	ANO8	Q9HCE9	1232 aa	Predicted RBP	8.79	□□□□□ -1
UBE3C-208	ENST00000497368	SLIT1	O75093	1534 aa		8.79	□□□□□ -1
UBE3C-208	ENST00000497368	KIF15	Q9NS87	1388 aa		8.78	□□□□□ -1
UBE3C-208	ENST00000497368	PSD	A5PKW4	1024 aa	Predicted RBP	8.78	□□□□□ -1
UBE3C-208	ENST00000497368	POTEE	Q6S8J3	1075 aa		8.78	□□□□□ -1
UBE3C-208	ENST00000497368	ZNF454	Q8N9F8	522 aa		8.78	□□□□□ -1
UBE3C-208	ENST00000497368	AXIN2	Q9Y2T1	843 aa		8.78	□□□□□ -1
UBE3C-208	ENST00000497368	ARHGAP31	Q2M1Z3	1444 aa		8.78	□□□□□ -1
UBE3C-208	ENST00000497368	GCC2	Q8IWJ2	1684 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms